Biochemistry - First Aid Flashcards
DNA exists in the…
condensed, chromatin form in order to fit into the nucleus.
Negatively charged DNA loops…
twice around positively charged histone octamer to form a nucleosome “bead”.
Histones are rich in…
the amino acids lysine and arginine.
H1 binds to the…
nucleosome and to linker DNA, thereby stabilizing the chromatin fiber.
In mitosis, DNA will…
condense to form chromosomes.
DNA and histone synthesis occurs during…
S phase.
The only histone that is not in the DNA core is…
H1.
Heterochromatin is..
condensed, transcriptionally inactive, sterically inaccessibl.e.
Euchromatin is…
less condensed, transcriptionally active and sterically accessible.
In DNA replications, the template strand cytosine and adenine are…
methylated which allows mismatch repair enzymes to distinguish between old and new strands in prokaryotes.
DNA methylation at CpG islands acts to…
repress transcription.
Histone methylation usually…
represses DNA transcription.
Histone acetylation acts to…
relax DNA coiling, allowing for transcription.
Purines
Adenine and Guanine; 2 rings
Pyrimidines
Cytosine and Thymine; 1 ring
thymine has a methyl
Deamination of cytosine makes…
uracil. Uracil is found in RNA; thymine in DNA.
The G-C bond has…
3 H bonds and is stronger than the A-T bond which has 2. Increased G-C content leads to increased melting temp of DNA.
Amino acids necessary for purine synthesis
Glycine
Aspartate
Glutamine
Nucleoside
base + deoxyribose
Nucleotide
base + deoxyribose + phoshpate
linked by 3’5’ phosphodiester bond
Purines de novo synthesis
start with sugar + phosphate (PRPP); add base
Pyrimidine de novo synthesis
make temporary base (orotic acid); add sugar and phosphate; modify base
Ribonucleotides are synthesized…
first and are converted to deoxyribonucleotides by ribonucleotide reductase.
Carbamoyl phosphate is involved in 2 metabolic pathways:
de novo pyrimidine synthesis and the urea cycle.