Bio Final New Material Flashcards
Hadean eon
hell on earth
4.5 to 4 billions years ago
Archean eon
4 to 2.5 billion years ago
1st emergence of cellular life 3.5 bya (prokaryotic stromatolites)
O2 revolution, many prokaryotes then went extinct
Oxygen revolution
atmospheric O2 oxygen revolution 2.7 bya
due to photoautotrophic cyanobacteria (stromatolites)
many prokaryotes died as a result of O2 poisoning
second smaller O2 revolution likely due to land plants
O2 pulled Fe(III) Oxide out of the atmosphere
Proterozoic eon
2.5-.5 bya, following archaean eon
development of single celled eukaryotic organisms, and then multicellular eukaryotic organisms, and animals right at the end of the eon
facts that support endosymbiont theory
mitochondria and chloroplasts divide and have DNA structure like prokaryotic organisms
they transcribe and translate their own DNA
ribosomes are more similar to prokaryotic ones
oldest multicellular eukaryotes
1.2 billion years ago in proterozoic eon (algae)
what are the Ediacaran biota
larger and more diverse soft-bodied invertebrate eukaryotic organisms
600-535 million years ago at the end of the Proterozoic eon
Phanerozoic eon and sub eras
animals emerge, colonization of land
Eras: Paleozoic, Mesozoic, and Cenozoic eras
the Cambrian explosion
Paleozoic era, 535 mya
sudden appearance of fossils resembling modern phyla
follows the Ediacaran biota who left no fossils
colonization of land, vascular plants
500 mya, paleozoic era
fungi, plants and animals
vascular plants 420 mya
why does mass extinction happen?
rate of species extinction increase due to disruptive global environmental changes
Permian extinction
251 mya
defines boundary between paleozoic and mesozoic eras
96% of marine animal species died
global warming due to volcanic eruptions in Siberia
Cretaceous mass extinction
65.5 mya
separates mesozoic and cenozoic era
half of all marine species and many terrestrial plants and animals
meteorite impact, dust clouds blocked sunlight and disturbed climate
adaptive radiation
rapid evolution of diversely adapted species from a common ancestor
follows mass extinctions, evolution of novel characteristics, and colonizations of new regoins
taxonomy
scientific discipline concerned with classifying and naming organisms
Linnaeus came up with the binomial classification system (Genus species)
Systematics is:
fossils, molecular data and genetics
phylogenetic trees with branch points that represent diverging species
sister taxa are groups that share an immediate common ancestor
phylogeny
evolutionary history of a species or group of related species
Gram negative vs gram positive in bacteria
gram negative: prokaryotic cell has in peptidoglycan cell wall, with plasma membranes sandwiching on either side
gram positive: prokaryotic cell has outer peptidoglycan cell wall, with plasma membrane underneath
prokaryotic flagellum made up of
motor, hook and filament sections
types of prokaryotes based on how they harness energy and carbon/feed:
phototrophs - light
chemotrophs - chemicals
autotrophs - CO2
heterotrophs - organic nutrients to make organic compounds
modes of nutrition: photoautotrophy, chemoautotrophy, photoheterotrophy, and chemoheterotrophy
obligate aerobe vs obligate anaerobe vs facultative anaerobe
obligate aerobe - requires O2 for cellular respiration
obligate anaerobe - poisoned by O2, used fermentation or anaerobic respiration
facultative anaerobe - can survive with or without O2
nitrogen fixation
some prokaryotes can convert N2 (g) into NH3 - fixing it so that it can be utilized by other organisms
Protist types by nutrition
span 4 supergroups of eukaryotic domain
algae - photoautotrophic
protozoa - chemoheterotrophic, phagocytosis
fungus-like - chemoheterotrophic, nutrients from environment
Protist types by locomotion
flagellates - ex. euglena
ciliates - ex. paramecium
amoeboid - ex. amoeba
gliding - ex. slime molds
diatoms
unicellular algae with chloroplasts, component of phytoplankton
covered in silicon dioxide called a frustule
dead diatoms fall to the sea bed and fix carbon
diatomaceous earth - cell walls make sediment used in toothpaste, detergent and soundproofing
Euglenids
autotrophic and heterotrophic (mixotrophic), contains chloroplasts
eye spots
pellicle - proteinaceous strip of microtubules creating slug-like mobility
Oomycetes
have hyphae and produce sporangia but are protists
radiolarians
radial pseudopodia surrounded by cytoplasm
engulf foods using pseudopods
cytoplasm brings food into main part of cell
origin of ancestral green algae
origin of land plants, 470 mya
origin of vascular plants 425 mya
adaptations for plants to survive on land
photosynthetic eukaryote able to survive and reproduce on land
protection of the embryo is most important - land plants called embryophytes
seedless non-vascular plants
liverworts, hornworts and mosses
gametophyte that grows into a sporophyte
seedless vascular plants groups and sub groups
Lycophytes - mosses, quillwort
Monilophytes - ferns, horsetails, whisk ferns
what formed the first forests during the paleozoic era?
lycophytes, horsetails and ferns
increased photosynthesis removed excess CO2 from the atmosphere and contributed to global cooling at the end of the Carboniferous period (late paleozoic era)
what became coal?
decay plants from Carboniferous forests in the Paleozoic era
fungi early evolution
among the earliest colonizers on land
likely formed mutualistic relationships with plants very early on
key traits of fungi
heterotrophic and absorb nutrients from outside
use enzymes to decompose complex molecules into smaller organic molecules (ex. cellulose to lignan)
versatility of enzymes means they can be decomposers, parasites or mutualists
cell walls contain chitin
most common body structures of fungi:
multicellular filaments hyphae to make mycellium networks to max absorption
single celled - like yeasts
Ascomycetes
common name Sac Fungi
marine, freshwater and terrestrial
decomposers, parasites or mutualists
from unicellular yeasts to multicellular cup fungi and morels
sexual spores produced inside ascocarps which contain sac-like asci
25% live as lichens
Basidiomycetes
common name: club fungi
decomposers of wood
club-like structure called basidium - transient diploid stage
Lichen
mutualism between photosynthetic organism (cyanobacteria or green algae) and fungus
algae provides carbon compounds, cyanobacteria provides carbon and nitrogen
fungus provides environment for growth
Organization of animals
Specialized cells form tissues with different functions
Tissues make up organs
Organs make up organ systems
Epithelial tissue description and types
covers outside of body, lines organs and cavities
cells are closely joined together
simple or stratified
squamous, cuboidal or columnar
connective tissue definition and types
binds and supports other tissues
sparsely packed cells in extracellular matrix (liquid, jelly or solid)
with fibers form to make: loose, cartilage, fibrous, adipose, blood and bone connective tissues
muscle tissue description and types
proteins actin and myosin filaments enable muscular contraction in response to nerve signals
skeletal (motor neurons), smooth and cardiac muscle
nervous tissue description and types
receipt, processing and transmission of information
neurons - send and receive
glia - nourish, insulate and replenish neurons
Schwann cells - insulate neurons
the body requires:
organic molecules for chemical energy - carbs, proteins and lipids
organic molecules for building and maintaining - carbs, proteins and lipids
essential nutrients - must be supplied by the diet
the essential amino acids (PVT TIM HLL)
phenylalanine + tyrosine, valine, tryptophan
threonine, isoleucine, methionine + cysteine
histidine, leucine, lysine
thiamine major function in the body
coenzyme used in removing CO2 from organic compounds
Niacin major function in the body
component of NAD+ and NADP+
Riboflavin major function in the body
component of FAD
Pantothenic acid major function in body
Component of coenzyme A which oxidizes pyruvate in citric acid cycle
mammalian digestive system
alimentary canal and accessory glands secreting digestive juices through ducts
peristalsis pushes food along
sphincters regulate movement of material between compartments
saliva contains
mucous - water, salts, glycoproteins, antimicrobial agents
bolus
chewed food ball that enters the pharynx, then to the esophagus
interior surface of stomach
highly folded with pits into gastric glands
gastric glands contain
mucous cells - lubrication and protection of lining
chief cells - secret pepsinogen
parietal cells - secret HCl, which activates pepsinogen into pepsin
intestinal wall
large circular folds, covered in villi
brush border: villi have simple columnar epithelial cells, blood capillaries, and lacteal
B6 major function in the body
coenzyme used in amino acid metabolism
Biotin major function in the body
coenzyme in synthesis of fat, glycogen and amino acids
folic acid major function in body
coenzyme in nucleic acid and amino acid metabolism
B12 major function in body
production of nucleic acids and RBC
Vitamin C major function in body
used in collagen synthesis and antioxidant
vitamin A major function in body
component of visual pigments, maintenance of epithelial tissues
vitamin D major function in body
aids in absorption of calcium and phosphorus
vitamin E major function in body
antioxidant, protects cell membranes
Vitamin K major functions in body
important in blood clotting
lacteal vessel
connected to lymphatic system inside villi
for fat transport via chylomicrons through the subclavian veins into circulatory system
gizzard
muscular organ filled with rocks to crush seeds in the stomach of birds and crocs
the advantage of a 2 ended digestive system
can have specialized regions that carry out digestion and absorption
covalently bonded P groups on ATP
3
hydrocarbons are
non-polar, hydrophobic
fatty acid chains
functions of plant roots
anchoring, absorbing minerals and water, storing carbs
taproot system
main vertical root from which lateral roots grow
arise from radicle embryonic root
found in eudicots and gymnosperms
DNA is present in plants in which organelles?
nucleus, mitochondria and chloroplasts
is ATP an electron acceptor?
no
where does ATP synthesis happen?
in the thylakoid and mitochondrial membrane
independent assortment happens when? law of segregation?
meiosis I, when homologous pairs line up and either pair can sort to either side
law of segregation refers to alleles sorting into different gametes during meiosis II
eudicots
flowering plants that have 2 seed leaves upon germination
angiosperms make up what percent of our diet overall
80%, grains and tubers
organs of a plant by system
shoot system: leaves and stems
root system: roots
adventitious roots
fibrous root system that arises from stems and leaves
found in monocots
lateral roots arise from them
what are root hairs
tubular extensions of epidermal cells
increase surface area of the root for water and nutrient absorption
types of modified root adaptations
prop roots - stability
storage roots - extra starch storage
green roots - increase photosynthesis
pneumatophores - grow above water to increase oxygen absorption (ex, mangroves)
main stem structures
alternating system of nodes where leaves are attached
internodes in between
axillary buds at the nodes for lateral shoots or branches
apical bud or terminal bud near shoot tip for elongation
apical dominance
maintains dormancy in most axillary buds
this is why we trim back plants to increase axillary growth
types of modified stems
rhizomes - lateral expansion and storage
stolons - lateral expansion
tubers - storage
parts of a leaf and types of modified leaves
blade and petiole
compound leaf (many leaves on 1 petiole) and simple leaf (1 leaf 1 petiole)
the main photosynthetic organ
modified leaves: spines, tendrils, reproductive leaves and storage leaves
dermal tissue functions, herbaceous and woody
defense against physical damage, pathogens and water loss
herbaceous plants have epidermis covered in waxy cuticle
woody plants have periderm
specialized epidermal cells
guard cells with stomata
root hairs in roots
Xylem
water and mineral transport tubular, elongated dead cells lignified secondary cell walls with pits 2 types: tracheids (longer, all xylem) and vessel elements (short and wide with perforated plates, angiosperms) multiples to create the rings of a tree
Phloem
made of sieve tube elements, alive but no organelles
companion cell organelles serve both cells
sieve plates on the ends - porous end walls for fluid flow
ground tissues
cells for storage, photosynthesis and support
cortex - external to vascular tissue
pith - internal to vascular tissue
pericycle
outermost layer of vascular cylinder of a root
origin point of lateral roots
why are mesophyll cells spread out
air pocket space like lungs for gas exchange
latewood and earlywood
diameter of xylem cells based on season
earlywood - diameter increases in spring to bring in more water
lateral meristems embryonic tissue in woody plants
vascular cambium - outside secondary xylem, secondary vascular tissue
cork cambium - underneath cork, secondary dermal tissue
bark is made up of
secondary phloem and layers of periderm