Bio Chem (Metabolism) Flashcards
Glycolysis Tissue
all tissues
Glycolysis Cellular compartment
cytosol
Glycolysis substrate
glucose
Glycolysis key enzymatic step
PFK-1* (rate limiting)
Hexokinase (found everywhere)
Glucokinase (pancreas and liver)
Glycolysis product
pyruvate
Glycolysis regulators
(+) insulin, Fructose 2,6-bisphosphate, AMP
(-) too much ATP or citrate
(-) ATP
Glycolysis Cofactors
Mg
Glycolysis Key intermediates
Glucose-6-phosphate can’t leave the cell once converted
Glycolysis energy production
2 pyruvate
2 ATP
2 NADH
Pyruvate oxidation tissue
tissue that have mitochondria and oxygen
Pyruvate oxidation location
mitochondrial matrix
Pyruvate oxidation substrate
pyruvate
Pyruvate oxidation Cofactors and key enzyme
Pyruvate dehydrogenase needs
thiamine, niacin, riboflavin,
NAD, FAD, TPP, CoA, lipoic acid
Pyruvate oxidation product
acetyl CoA
Pyruvate oxidation regulation
(+) NAD, ADP
Pyruvate oxidation energy production
2 acetyl CoA
2 NADH
2 NADH
Anaerobic glycolysis tissue
tissue w/o oxygen
Anaerobic glycolysis cellular compartment
cytosol
Anaerobic glycolysis substrate
pyruvate
Anaerobic glycolysis key enzyme step/cofactor
lactate dehydrogenase
NAD, FAD, TTP
Anaerobic glycolysis product
lactate can be toxic if can’t eliminate
Anaerobic glycolysis regulators
(+) NADH
Anaerobic glycolysis energy generation
-NADH
Krebs cycle tissue
all tissues, but liver is most significant
Krebs cycle cellular compartment
mitochondrial matrix
Krebs cycle substrate
acetyl CoA
Krebs cycle key enzyme/cofactor
isocitrate dehydrogenase (1st energy generating step) and alpha ketoglutarate dehydrogenase
AKDH needs same 5 cofactors as pyruvate dehydrogenase - NAD, FAD, TPP, CoA, lipoic acid
Krebs cycle product
Co2, NADH, FADH2, GTP
Krebs cycle regulation
(+) NAD, FAD, GDP
(-) ATP, citrate
Krebs cycle energy productions
(+) 3 NADH
(+) 1 FADH
(+) 1 GTP
(run through twice for one molecule of glucose)
(+) FADH
Glycogen synthesis tissue
liver
Glycogen synthesis cellular compartment
cytosol
Glycogen synthesis substrate
glucose
Glycogen synthesis key enzyme step
phosphoglucomutase (commits glucose to pathway)
glycogen synthase (links glucose molecules)
Glycogen synthesis product
glycogen
Glycogen synthesis regulation
(+) UTP
Glycogen synthesis key intermediates
UDP-glucose
Glycogen synthesis energy production
-1 ATP/glucose
Glycogenolysis tissues
liver, muscle
Pentose Phosphate Pathway/HMP Shunt tissues
liver, RBC mammary gland, adrenal cortex
Pentose Phosphate Pathway/HMP Shunt cellular component
cytosol
Pentose Phosphate Pathway/HMP Shunt substrate
glucose-6P
Pentose Phosphate Pathway/HMP Shunt key enzyme step
glucose-6P dehydrogenase (oxidative)
transktetolase (non-oxidative, requires TTP)
Pentose Phosphate Pathway/HMP Shunt product
NADPH, ribose sugars
Pentose Phosphate Pathway/HMP Shunt key intermediates
NADPH
Fatty Acid Synthesis tissues
liver, adipose, mammary glands, kidney
Fatty Acid Synthesis cellular component
cytosol (leaves mitochondria via citrate shuttle)
Fatty Acid Synthesis substrate
acetyl coA
Fatty Acid Synthesis key enzyme step
acetyl coA carboxylase (requires biotin)
fatty acid synthase (has B5 as part of structure)
Fatty Acid Synthesis product
palmitate
Fatty Acid Synthesis regulation
(+) insulin
Fatty Acid Synthesis key intermediates
malonyl coA
Fatty Acid Synthesis energy production
-1 ATP/malonyl CoA, -2 NADPH/malonyl CoA
Beta oxidation tissues
liver, muscle, kidney
Beta oxidation cellular component
mitochondria (peroxisome)
Beta oxidation substrate
fatty acyls
Beta oxidation key enzyme step
acetyl CoA synthase
Beta oxidation product
acetyl coA, NADH, FADH2
Beta oxidation regulation
(+) glucagon
Beta oxidation key intermediates
fatty acyl coA, fatty acyl carnitine
Beta oxidation energy production
16C saturated FA = 129 ATP (131 total - 2 ATP for activation)
ketogenesis tissue
liver
ketogenesis cellular component
mitochondrial matrix
ketogenesis substrate
acetyl coA
ketogenesis key enzyme step
HMG CoA synthase
ketogenesis product
beta-hydrozybuterate dehydrogenase, acetone, acetoacetate
ketogenesis regulation
(+) acetyl CoA
ketogenesis key intermediates
HMG CoA
ketogenesis energy production
-2 acetyl coA, -1 NADH
ketone degradation tissues
brain, skeletal muscle, heart muscle
NOT liver
ketone degradation cellular component
mitochondrial matrix
ketone degradation substrate
products of ketogenesis
beta-hydrozybuterate dehydrogenase, acetone, acetoacetate
ketone degradation key enzyme step
beta-hydrozybuterate dehydrogenase
ketone degradation product
acetyl coA
ketone degradation key intermediates
HMG CoA
ketone degradation energy production
+2 acetyl coA, +1 NADH, -1 GTP
cholesterol synthesis tissue
liver
cholesterol synthesis cellular component
cytosol
cholesterol synthesis substrate
acetyl coA
cholesterol synthesis key enzyme step
HMG CoA reductase
cholesterol synthesis product
cholesterol
cholesterol synthesis regulation
(+) insulin
cholesterol synthesis key intermediates
HMG CoA, mevolonate –> CoQ
cholesterol synthesis energy production
lots
body doesnt usually break it down for energy
urea cycle tissue
liver
urea cycle cellular component
cytosol, mithochondrial matrix
urea cycle substrate
NH4+, glucose, CO2, aspartate
urea cycle key enzyme step
CPS I (Rate limiting)
urea cycle product
urea
urea cycle regulation
(+) N-acetyl glutamate
urea cycle key intermediates
arginine, fumarate
urea cycle energy production
-2 ATP
gluconeogenesis tissues
liver, kidney, SI
gluconeogenesis cellular component
mitochondrial matrix, cytosol, ER
gluconeogenesis substrate
alanine (AA), lactate (AR), glycerol (Lipids)
gluconeogenesis key enzyme step
pyruvate carboxylase/ PEP carboxykinase
PFK I
G6P