Background 3 GI Flashcards

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1
Q

why is direct microscopy of no use with stool samples

A

heavy growth of normal flora

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2
Q

why is blood agar plate not used for stool samples

A

not possible to distinguish pathogen from normal flora

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3
Q

what type of media is used for stool samples

A

indicator media such as macconkey

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4
Q

samlonella and shigella are both

A

non lactose fermenters on macckoney agar

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5
Q

e.coli is usually a

A

lactose fermenter on macconkey

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6
Q

name a media which contains more inhibitory substances than macconkey

A

xld

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7
Q

on xld salmonella is a

A

red colony with a black centre

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8
Q

why does salmonella have a black centre in xld

A

becuase it produces H2s

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9
Q

what does shigella loook like on xld

A

red colony

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10
Q

e.coli looks like what on xld

A

it doesnt grow on xld

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11
Q

which pathogens are associated with gi infection in the uk?

A

salmonella, shigella and campylobacter

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12
Q

which pathogens are important to search for if the patient has travelled to an area where cholera is endemic?

A

vibrio

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13
Q

overseas travel would require the stool to be examined for

A

ova, cysts and parasites

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14
Q

campylobacter selective media is incubated for how many hours before it is examined?

A

48 hours

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15
Q

non lactose fermenters on the macconkey plate are picked off for biochemical testing such as the

A

oxidase test

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16
Q

the organisms that are oxidase negative are further tested biochemically e.g. a ____ test

A

urea

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17
Q

all urea negative isolates are

A

identified biochemically overnight

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18
Q

with the xld plate the red colonies are tested using

A

oxidase first

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19
Q

all oxidase negative isolates are tested further (from the xld plate) using

A

urea

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20
Q

the campylobacter selective media is examined for the presnece of colonies showing the

A

typical morphology of campylobacter species

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21
Q

suspicious colonies on the campylobacter are

A

gram stained and checked biochemically (oxidase)

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22
Q

if biochemistry identified salmonella and shigella colonies which tests are performed

A

agglutination tests to confirm the result using specific anti-sera

23
Q

the most common subspecies of salmonella in the uk are

A

salmonella enteritidis and salmonella typhimurium

24
Q

describe salmonella

A

gram negative rods, oxidase negative, non lactose fermenters on macconkey agar

25
Q

typhoid is caused by

A

salmonella typhi

26
Q

how is typhoid transmitted

A

contaminated water or by an asymptomatic carrier

27
Q

shigella is also known as

A

bacillary dysentery

28
Q

shigella is caused by

A

shigellae

29
Q

the infective dose of shigellae is very

A

small

30
Q

transmission of shigella is by

A

direct contact

31
Q

what are the most common types of shigella in the uk?

A

shigella sonnei and shigella flexneri

32
Q

describe shigellae

A

gram negative rods, oxidase neg, non lactose fermenters on macconkey agar

33
Q

most common cause of gastro enteritis in the uk

A

campylobacter jejuni

34
Q

what is the usual source of infection of campylobacter

A

poorly cooked poultry , contact with young animals

35
Q

campylobacter enteritis usaully occurs in

A

adults and older children

36
Q

symptoms of campylobacter enteritis are

A

severe bloody diarrhoea

37
Q

describe campylobacter jejuni

A

microaerobic organism, thin curved gram neg rod, oxidase positive

38
Q

verotoxin producing e.coli causes

A

haemorrhagic colitis and HUS Hemolytic uremic syndrome

39
Q

what is e.coli usually tansmitted by

A

raw meat

40
Q

e.coli O157 plated on sorbital macconkey doesnt ferment sorbitol so forms

A

colourless colonies

41
Q

other e.coli colonies not o157 produce which colour colonies on sorbitol macconkey

A

dark pink

42
Q

describe e.coli O157

A

gram negative rod, oxidase negative

43
Q

what causes cholera

A

vibrio cholerae 01 or 01239

44
Q

v cholerae produces a toxin causing secretions of fluids into intestine causes

A

severe diarrhoea

45
Q

transmission by

A

water or food

46
Q

vibrio cholera is isolated on which type of agar and which colour does it grow as

A

TCBS agar and grows as yellow colonies

47
Q

describe v.cholera

A

gram neg curved rod and oxidase positive

48
Q

rota virus causes 30-60% of GI infections in

A

infants

49
Q

rota virus is rare in

A

children and adults

50
Q

how is rotavirus transmitted

A

in nurseries and playgroups poor hand washing and hygiene

51
Q

what is the most common waterborne disease in the uk?

A

cryptosporidiosis

52
Q

what causes cryptosporidiosis and what exactly is it

A

cryptosporidium parvum is a parasite

53
Q

how is cryptosporidium parvum excreted from a host

A

as a chemical resistant oocyst

54
Q

how is cryptosporidium seen in the lab

A

by examining stool samples using ZN stain