Amino Acids/Proteins Flashcards
What are the hydrophobic Amino Acids?
She is a VIP GAL Trypin on F-in MethValine, Isoleusine, Proline, Glycine, Alanine, Leucine, Tryptophan, Phenylalanine, Methionine
Aromatic AA
Try Trippin with PhenytoinTyrosine, Tryptophan and phenylalanine
Essential Amino Acids
Pvt Tim HallPhenylalanine, Valine, ThreonineTryptophan, Isoleucine, MethionineHistidine, Arginine, Leucine, Lysine
Have OH groups
Three sisters yelpedThreonine, Serine, Tyrosine
BCAA
Leucine, Isoleucine, and valine
Negatively charged and acidic
Why so negative mate? assholeGlutamate and aspartate
Positively charged and Basic
Basic bitch Shallow HALHistidine, Arginine, Lysine
Amino acids function as precursors for what important molecules?
Acetyl-CoA is produced from pyruvate which can be generated from AA
TCA cycle intermediates
Precursors of nitrogen-containing molecules
Hormones, insulin and glucagon
AA are made up of:
Central-carbon
hydrogen
Amino group
R-group or side chain
At pH lower than 2.8, what amino acid form predominates?
fully protonated
In humans, most amino acids are in the __-form except ______.
L-form
D-serine
What equation do amino acids obey?
Henderson-Hasselbalch equation
What are zwitterions
Amino acids posses positive and negative charges at neutral pH
pH at which the charge is “zero” is called what?
isoelectric point
*migrate towards positive charge and stop when it is neutral
What are non-proteinogenic amino acids?
non-coded or unnatural amino acids
What are biogenic amino acids
naturally occuring, biologically active amines
*norepinephrine, histamine, and serotonin
Describe the fuel supply, structural support and activity amino acids provide
Fuel supply: TCA cycle->ATP production
Structural support: elastin, keratin, collagen
Activity: Enzymes, cell signaling, motion
What are the bonds found in tertiary structure?
Hydrophobic, disulfide bonds, metal ions (cofactors), hydrogen bonding
What are the bonds found in Quaternary structure?
held together by hydrogen bonds, salt bridges, hydrophobic interactions and Van der Waals forces
Overall charge at a particular pH is directly related to its AA composition. The net electrical charge of a protein is determined by a combination of charges on its component AA at a given pH. The isoelectric point (pl) of a protein is defined as the pH at which the protein has no net charge. A protein carries a net positive charge at what pH values?
below its pl and negative charge at values above its pl.
**The property of protein charge can be used to separate the proteins in a complex mixture using an electrical field. Example: gel electrophoresis
Oxidation of the -SH group of cysteine residues in the lumen of the RER creates ________ bonds, usually in secreted proteins. The oxidizing environment necessary for the formation of disulfide bonds, however, does not exist within the cytoplasm due to high concentration of the ________.
covalent disulfide
antioxidant glutathione
______, which is a major protein in hair, has a high cysteine content and tends to form disulfide bonds, manipulation such bonds is key to curing or straightening in hairstyles
Keratin