Amino Acids/Proteins Flashcards

1
Q

What are the hydrophobic Amino Acids?

A

She is a VIP GAL Trypin on F-in MethValine, Isoleusine, Proline, Glycine, Alanine, Leucine, Tryptophan, Phenylalanine, Methionine

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2
Q

Aromatic AA

A

Try Trippin with PhenytoinTyrosine, Tryptophan and phenylalanine

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3
Q

Essential Amino Acids

A

Pvt Tim HallPhenylalanine, Valine, ThreonineTryptophan, Isoleucine, MethionineHistidine, Arginine, Leucine, Lysine

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4
Q

Have OH groups

A

Three sisters yelpedThreonine, Serine, Tyrosine

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5
Q

BCAA

A

Leucine, Isoleucine, and valine

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6
Q

Negatively charged and acidic

A

Why so negative mate? assholeGlutamate and aspartate

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7
Q

Positively charged and Basic

A

Basic bitch Shallow HALHistidine, Arginine, Lysine

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8
Q

Amino acids function as precursors for what important molecules?

A

Acetyl-CoA is produced from pyruvate which can be generated from AA
TCA cycle intermediates
Precursors of nitrogen-containing molecules
Hormones, insulin and glucagon

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9
Q

AA are made up of:

A

Central-carbon
hydrogen
Amino group
R-group or side chain

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10
Q

At pH lower than 2.8, what amino acid form predominates?

A

fully protonated

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11
Q

In humans, most amino acids are in the __-form except ______.

A

L-form

D-serine

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12
Q

What equation do amino acids obey?

A

Henderson-Hasselbalch equation

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13
Q

What are zwitterions

A

Amino acids posses positive and negative charges at neutral pH

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14
Q

pH at which the charge is “zero” is called what?

A

isoelectric point

*migrate towards positive charge and stop when it is neutral

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15
Q

What are non-proteinogenic amino acids?

A

non-coded or unnatural amino acids

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16
Q

What are biogenic amino acids

A

naturally occuring, biologically active amines

*norepinephrine, histamine, and serotonin

17
Q

Describe the fuel supply, structural support and activity amino acids provide

A

Fuel supply: TCA cycle->ATP production
Structural support: elastin, keratin, collagen
Activity: Enzymes, cell signaling, motion

18
Q

What are the bonds found in tertiary structure?

A

Hydrophobic, disulfide bonds, metal ions (cofactors), hydrogen bonding

19
Q

What are the bonds found in Quaternary structure?

A

held together by hydrogen bonds, salt bridges, hydrophobic interactions and Van der Waals forces

20
Q

Overall charge at a particular pH is directly related to its AA composition. The net electrical charge of a protein is determined by a combination of charges on its component AA at a given pH. The isoelectric point (pl) of a protein is defined as the pH at which the protein has no net charge. A protein carries a net positive charge at what pH values?

A

below its pl and negative charge at values above its pl.

**The property of protein charge can be used to separate the proteins in a complex mixture using an electrical field. Example: gel electrophoresis

21
Q

Oxidation of the -SH group of cysteine residues in the lumen of the RER creates ________ bonds, usually in secreted proteins. The oxidizing environment necessary for the formation of disulfide bonds, however, does not exist within the cytoplasm due to high concentration of the ________.

A

covalent disulfide

antioxidant glutathione

22
Q

______, which is a major protein in hair, has a high cysteine content and tends to form disulfide bonds, manipulation such bonds is key to curing or straightening in hairstyles

A

Keratin