Amino Acids Flashcards
Natural Occurring Amino Acids
L- Amino acid
Amino Acids made up of
- Amine functional group
- Carboxylic functional group
- Side chain
-Nonpolar (hydrocarbons)
-Polar (Alcohols, amides, thiols)
-Acidic/Basic (carboxylic acids, amines)
D- Amino Acid
Amine group is on:
Right side (Fischer projection)
or
Dash on bond-angle depiction
L- Amino Acid
Amine group is on:
Left side (Fischer projection)
or
Wedge on bond-angle depiction
Termini
N-terminus: beginning amine functional group
C-terminus: ending carboxylic acid functional group
Type of Linkage in Peptides
Peptide bond (amide bond)
Cyclic Peptide (# of Residues)
Number of residues/amino acids is equal to # peptide bonds (amide bond)
Acyclic Peptide (# of residues)
Number of residues/amino acids is equal to # peptide bonds (amide bond) + 1
Primary Structure
Sequence of amino acids
Secondary Structure
Fixed arrangement of polypeptide backbone
(stabilized by hydrogen bonding)
-Alpha helix
-Beta sheet
Tertiary Structure
Unique 3-D shape
Quaternary Structure
Arrangement of multiple tertiary structures(subunits)