AM Docking and Drug Design Flashcards
1
Q
ProMate
A
Neuvirth et al., 2004
Built by combining all significant interface properites (lower B-factor even in apo form, certain 2nd struc elements, aromatic side chains, etc)
2
Q
Ligsite algorithm (Pocket-finder)
A
Hendlich et al., 1997
3
Q
Q-site finder
A
Laurie and Jacskon, 2005
4
Q
Grid
A
Goodford, 1985
5
Q
DOCK
A
Kuntz et al., 1988
6
Q
Connolly’s molecular surface
A
Connolly, 1983
7
Q
AMBER potential
A
Kollman, 1995
8
Q
GOLD
A
Jones, 1997
9
Q
AutoDock
A
Goodsell, 1990
