39-40 (-) and dsDNA Flashcards
what is the only virus in the orthomyxovirus family called?
influenza (Note there are influenza A,B,C)
Orthomyxoviruses are enveloped? helical? segmented?
enveloped and helical with 8 segments
What 3 factors determine the strain of flu?
1) NP protein
2) M1 protein
3) M2 protein
what does the VAP (hemaglutinin) of orthomyxoviruses interact with on host cells?
Sialic acid on host to promote attachment
(note that HA has to first be cleaved by a protease in order to bind to sialic acid. This protease is abundantly found in the lung of humans.)
what does H5N1 influenza mean?
H=hemagluttinin type 5
N=Neuraminidase type 1
what do the orthomyxoviruses have to take into the cell with them besides their - sense RNA?
RDRP
what kind of linkage (bond) connects HA to SA?
alpha 2,6 linkage using galactose (this is important because it allows for tropism of the virus to respiratory)
How do orthomyxoviruses (influenza) get into the host cell?
Binding HA and SA, then they are phagocytosed. From they they fuse with and endosome. The low Ph and M2 protein pump allows fusion of membranes. RNA enters cytoplasm.
where does orthomyovirus replicate?
in the nucleus. Recall this is the exception because it is a (-) strand RNA virus.
Orthomyxoviruses do not have caps needed for translation. How do they fix this problem?
They steal the 5’ caps from the cellular mRNA. This promotes their growth and inhibits the host.
What does the orthomyxovirus use for replicating its genome?
RDRP (it goes from - stand that serves as a template for + stand that once again serves as a template for - stand)
How do the viruses bud away from the host cell?
They use NA (this cleaves the Sialic acid facilitating its release. This is where Tamaflu works)
why can you get the flu every year?
New strains due to HA (H) and NA (N) variation. ( so you are never getting the same strain twice. You get a slight variation)
what is antigenic drift in influenza?
minor changes in HA or NA from point mutations
what is antigenic shift in influenza?
major changes in HA or NA from complete replacement of one or the other. (This only occurs in influenza A)
what causes the yearly cycle of influenza? what causes a pandemic?
yearly cycle=antigenic drift
pandemic=antigenic shift
what do you elicit an immune reaction against in influenza?
HA and NA
why does influenza change every year through antigenic shift?
Its because it uses an error prone RDRP that allows for the point mutations in both influenza A and B
why are orthomyxovirus able to under go genetic shift so easily?
because they have 8 segments which makes for easy recombination.
T/F orthomyxoviruses have known avian and swine connections for recombination?
True (Ex: swine flu)
why did the flu of 1918 kill so many people?
Because there was an extreme antigenic shift in influenza (new HA or NA) that the human population had never seen before. Also, the RDRP was more pathogenic
A spanish flu of 1918 kill a lot of people. What class of flu was it A, B, or C?
A, you know this because it was able to undergo genetic shift which can only be done by type A
what barrier prevents free flow of influenza A from waterfowl to pigs to humans?
Sugar linkages.
Birds use 2,3 linkages and humans use 2,6 linkages.
when and how is the flu spread?
when= mainly in winter
how=large aerosol droplets