25- Evolution of You Flashcards

1
Q

who provided the first attempt to classify humans in comparison to animals, how did he classify

A

Linneaus 1735

  • divided homo into 6 subgroups
    1. ferus (feral children)
    2. monstrous (people with physical deformities)
    3. americanus (american indigenous)
    4. asiaticus (populations from asian countries)
    5. eropeus (europeans)
    6. afer (africans)
  • Linneaus further divided homo based on “principle traits” (racist)
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2
Q

other proposed ideas before theory of evolution

A

A number of scientists between 1774 and 1817 had ideas that linked apes and humans:

  • James Burnett - thought apes as wild variants of humans
  • Delisle de Sales - thought apes were an intermediate between humans and animals
  • Constant Dumeril- described apes based on physical relatedness to humans
  • George Cuvier- placed apes as animals closest to man, but denied evolution as the root when darwin published his work
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3
Q

what was darwin’s theory on human evolution

A

In 1871, Darwin proposed that shared anatomical traits between humans and apes meant that they had a recent common ancestor

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4
Q

the fossil record: a timeline through history

A
  • up to 1800s, no fossils of ancient human species
  • in 1829 and 1848: skulls found but not recognized
  • 1856: bones found in Germany
  • 1859: darwin publishes “on the origin of species”
  • 1864: geologist examined the skull from Germany–> proclaimed it was a different species based on the morphological characteristics of the skull… first human species identified besides our own! Named “homo neanderthalensis” (after where it was found)
  • 1886: 2 preserved Neanderthal skeletons found in Belgium, found alongside extinct Pleistocene mammals –> paradigm shift: could no longer deny ancient age of Neanderthal skeletons.
    Identification of many different species in homo followed form 1891 to 2010
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5
Q

what did we previously believe about human evolution

A

We once believed there was a straight line from ape ancestor to us today
- once single evolutionary branch
- homo species did not go extinct, instead they became the next species in the homo genus
This gave us the “march of progress” graphic

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6
Q

whats wrong with the “march of progress”

A
  • implies continuous progress in homo genus
  • doesnt show failed and extinct lineages
  • doesn’t show hybridizing
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7
Q

issues using morphological traits to identify human species

A
  • fossil record = fragmented

- difficult to tell apart natural variation with species from differences separating species

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8
Q

issues using DNA to identify human species

A
  • half life of DNA is 521 years
    (takes 521 years for half of all DNA in a given sample to break down)
  • most recent extinction of ancient homo species was 24,000 years ago –> we couldn’t extract DNA
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9
Q

what is aDNA

A

= ancient DNA

  • age is around 150 years old to millions
  • oldest found so far: 800,000 years old
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10
Q

problem with analyzing aDNA

A
  • oldest aDNA sequenced so far was 430,000 years old

- could only sequence 0.1% of the entire genome they set out to build –> rest of DNA was too degraded

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11
Q

how can we analyze DNA which is degraded

A
  • PCR lets us takes small bits of DNA and make lots of copies
  • we know which regions of DNA are more likely to break down over time –> can design models to take this into account when reconstructing DNA sequences
  • can build ancient genomes from fragments by comparing them to modern descendants
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12
Q

which part of the body is best to extract DNA

A
  • protected structures (such as inside teeth and bones)
  • more difficult for bacteria + environment to degrade
  • DNA extracted from amber can still theoretically be analyzed millions of years after being entombed
    (limited to plants, bacteria, anthropods)
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13
Q

example of mistakenly identifying aDNA

A
  • due to modern contamination, we thought human DNA was dinosaur cytochrome b
  • original researchers did not verify that their “dinosaur sequences” were not found in modern descendants (like birds)
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14
Q

what is the Neanderthal genome project

A

= international effort to sequence the entire genome of H. nethanderthalensis
(like the human genome project)
- began 2006 –> almost completed in 2013
- took only 4 years, and had to sort through degraded and contaminated aDNA

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15
Q

what did we discover about H. nethanderthalensis from the neanderthal genome project:

A
  • H. nethanderthalensis likely started with a very small founder population of 3000 individuals
    –> coincides with the “out of africa” migration theory
  • H. nethanderthalensis had a gene mutation in FOXP2 we believed to be required for complex speech
    (Neanderthals may have had a language like us)
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16
Q

what did we discover about H. sapiens from the neanderthal genome project:

A
  • all H. sapiens populations outside of africa have between 1-4% of neanderthal DNA in their genome –> gene flow between ancient species of Homo
  • ancient H. sapiens were hybridizing with ancient H. neanderthalensis –> producing fertile offpspring
  • populations of H. sapiens from inside Africa have little to no Neanderthal DNA in their genome
    (H. neanderthalensis rarely or never entered Africa)
17
Q

who is cheddar man

A

= skeleton of a man found near Cheddar Gorge in Somerset

  • body was 10,000 years old
  • oldest complete skeleton in Britain
  • analysis of aDNA suggest that early Bretons had dark skin
  • but we don’t know enough about the genetics of melanin expression to accurately say what color the skin was
18
Q

aDNA: the denisovans

A
  • in 2010, “Denisovan hominins” identified from only a finger bone and a few teeth
  • pre DNA, this would not have been enough to accurately identify a species
  • 2013: analysis of mitochondrial DNA found the Denisovans to be a distinct group from H. neanderthalensis and H. sapiens
19
Q

what do we know about the denisovans

A
  • denisovans interbred with h. sapiens and h. neanderthalensis
  • particularly pronounced in East Asian populations
20
Q

aDNA-:our third cousin?

A
  • new unidentified human species found to have interbred with Denisovans
  • first time a species has been identified through DNA alone
    Who were they?
  • ancient DNA
  • not found in neanderthals or modern h. sapiens
  • possibly from a more archaic species of Homo that we haven’t been able to extract DNA from
21
Q

modern genetic diversity

A
  • all H. sapiens populations out of Africa are the result of very recent founder effects
  • small populations = loss genetic variation –> founder effect
  • LOTS of genetic diversity between people in Africa, not so much between people in other countries
22
Q

recent developments with aDNA

A
  • developed a way to extract aDNA from sediments on the ground
  • DNA can bind with minerals, helping preserve it
  • our methods for telling apart aDNA from modern and bacterial DNA has improved a lot