๐ฉ๐๐ซ๐ข๐จ๐๐ข๐๐๐ฅ Flashcards
a โtreeโ which estimates the โhistoricalโ connections between species or genes
that they carry, it is the evolutionary history of the relationship between all living things.
Phylogeny
is a branching diagram that discusses the evolutionary history
of a group of organisms.
Phylogenetic Tree
OTU
Operational Taxonomic Unit
the branch lengths are proportional to the number of
amino acid/nucleotide changes.
Scaled Branches/Phylogram
The branch length is not proportional to the number of
changes occurring.
Unscaled Branches/Cladogram
reflect the most basal ancestor of the tree in question
Rooted tree
do not imply a known ancestral root
unrooted trees
the principle that, out of all possible explanations for a phenomenon, the simplest of the set is most likely to be correct
parsimony method
should contain sequences from only orthologous genes
species trees
Sequences from different homologs can be included
gene tree
a clade it consists of an ancestor and all its descendants
monophyletic group
A clade that excludes species that share a common ancestor with its member
Paraphyletic
is one whose membersโ most recent
common ancestor is not a member of the group
Polyphyletic group
โข viewed species as fixed (unchanging).
โข Concluded that life-forms could be arranged on a ladder, or scale, of increasing complexity, later called the Scala Naturae (โscale of natureโ)
Aristotle
This process involves ๐๐ฎ๐ญ๐ญ๐ข๐ง๐ ๐๐๐ ๐ฌ๐๐ช๐ฎ๐๐ง๐๐๐ฌ and pasting them
on a new sequence to create an organism with a specific set of hand-picked
traits.
Genetic Engineering/DNA Technology