Week 4 Lecture Kinetics and Monitoring Growth Flashcards

1
Q

What is Kinetics of growth

A

Orderly increase in cellular components, resulting in cell enlargement and eventually leading to cell division
-Ideally growth kinetics is a homogeneous unicellular suspension culture
-We can use differential equations in continuum model
-Divisions produce identical daughter cells
-Generation vs. generation time

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2
Q

Why do we need good mixing in bioreactor for kinetics of growth?

A

-Biomass and number of cells will increase
-We need good mixing in bioreactor because we want to have an even heat transfer, even concentration of substrate, want it to be homogenous
-If there is no synchronous growth everything will be upside down, certain microbes in stationary phase and growth phase when they’re not supposed to be
-In stationary phase strictly control concentration of substrates so we don’t go to exponential phase too soon

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3
Q

What are the issues of Kinetics?

A

-Increase of biomass vs. increased number of cells due to division
-Asynchronous growth vs. synchronous
-Fermentation under different operating conditions (batch, fed-batch, continuous)

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4
Q

What happens if there is no synchronous growth?

A

-If there is no synchronized growth and homogenous conditions, microbes will all be in different phases, no correlation between biomass growth and increasing number of cells in bioreactor
-Growth rate in stationary phase slower than growth rate in exponential phase

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5
Q

What are the different growth phases?

A

-Lag
-Acceleration
-Exponential
-Deceleration
-Stationary
-Death phase

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6
Q

What is Lag phase?

A

-Intense metabolic activity
-Length of lag time depends on the age, -phase of growth microorganisms were taken from
-Chemical composition of fermentation media influences the length of lag time
-Physiological stress (inoculum moved from low osmotic to high osmotic pressure)

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7
Q

What is acceleration phase?

A

Cell division with increased rate until max growth rate umax is reached

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8
Q

What is the exponential phase?

A

-Growth begins cell number/biomass increase at a constant rate (x biomass, N number of cells)
-When a cell divides we say generation and time it takes is called mean generation time
-Mean generation time (doubling the number) td=t/n
-Division rate constant n/t
–Once substrates are consumed growth rate of microbes is going into deceleration phase

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9
Q

What is exponential growth?

A

Exponential growth begins when all nutrients are supplied in excess, then there is a relationship between # of cells and biomass then we have balanced growth

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10
Q

What is the Deceleration phase?

A

-Level of substrate decreases, becoming limiting and can not sustain max growth rate
-Limiting substrate is metabolized then growth is no longer sustainable

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11
Q

What is the Stationary phase?

A

-No net change in cell number; rate of divisions=rate of death of cells; but microorganisms are still metabolically active using intracellular storage compounds

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12
Q

What is Death phase?

A

-Cells die or can form spores to survive depending

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13
Q

What is Batch fermentation?

A

-Not steady state because: rate constant (u) changes, substrate concentration decreases, product-biomass concentration increases, pH changes, temperature might change (if we do not control the heat), and there is an accumulation of byproducts

-operations involve; charging water and substrates, sterilization, inoculation, production of products, harvesting, cleaning

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14
Q

Fed-batch (continuous process)?

A

-CSTR experiment is an example

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15
Q

What is the Kinetics growth equation?

A

xt=x0 * e^ut or ln xt= u*t + lnx0

x= grams of biomass
t=time
u= rate constant

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16
Q

Kinetics doubling time equation?

A

t= ln2/u

17
Q

What are the Direct Methods of Monitoring Growth?

A

-Dry weight determination
-Cell counting by microscopy
-Plate counting methods

18
Q

What are the Indirect Methods of Monitoring Growth?

A

-Turbiditmetry
-Spectrophotometry (optical density)
-Estimation of cell compounds (protein, DNA, ATP)
-On-line monitoring of CO2, O2

19
Q

What are the issues in Monitoring of Growth?

A

-Issues include: duration, sensitivity, properties of material to be tested, costs

20
Q

Direct Methods

A

-Petrof-Hauser or Neubauer type counting chambers
-Counting # of cells within proportion of grid
-Rapid but can not distinguish between dead and living cells
-Samples must contain higher cell count minimum is 5*10e^6 cells/ml

21
Q

What are Electronic counters?

A

-Coulter counter- measurement of change in electrical resistance produced by non conducting particles suspended in an electrolytes
-For toner particles , how many microbial particles are forming and what shape they are
-The more particles you have the more resistance from the original reference

22
Q

What is Plate counting?

A

-Detection of viable cells able to form colonies
-Spread plating (aerobic)
-Pour plating (anaerobic)
-Calculating of the colonies by taking into consideration dilution and volume of the substrate
-CFU colony forming units
-Time 1-2 days

23
Q

What is turbidity measurement?

A

-Light scattering by suspension of cells
-It is proportional to cell concentration
-Particles in sample, light scatters because of this, will measure the amount of light that is scattered from your particles, light that is reflected at 90 degrees

24
Q

What is dry weight estimation?

A

-Living and dead cells
-Liquid culture samples
-Filtration (0.2-0.45um membrane) under vacuum required
-Drying at 105*C to a constant weight
-Milligrams of cell per ml of culture
-High volume of samples required

25
Q

What is ATP bioluminometry?

A

-To determine concentration of viable cells (living)
-Uses enzyme-substrate complex luciferase-luciferin extracted from the firefly which generates photon of light per one molecule of ATP
-This complex is added to the sample and resulting signal (light intensity due to photons attached to each molecule of ATP) is measured by bioluminometer
-Luciferin interacts with ATP and produces photon

26
Q

What is On line monitoring?

A

-Optical density, capacitance based probes
-Measurement of CO2 generated or O2 consumed
-Bug-lab
-CO2 detector, O2 detector, Ethanol detector