Vocabulary Flashcards

1
Q

PCR (Polymerase Chain Reaction)

A

One of the most widely used techniques in molecular diagnostics, PCR amplifies small quantities of DNA to detectable levels. This allows for the detection of specific genes or mutations that may indicate the presence of a disease or condition.

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2
Q

Next-Generation Sequencing (NGS)

A

NGS technologies allow for the sequencing of entire genomes or targeted regions at a high throughput. This enables comprehensive genetic analysis, identifying a range of mutations, polymorphisms, or pathogens in a single test.

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3
Q

Hybridization Assays and Microarrays

A

Techniques used to detect specific sequences of nucleic acids by pairing complementary strands of DNA or RNA through base-pairing rules.

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4
Q

Point-of-care (POC) Testing

A

Diagnostic tests performed at or near the site of patient care, providing rapid results without the need for centralized laboratory facilities. POCT improves clinical decision-making and patient outcomes.

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5
Q

Bioinformatics

A

An interdisciplinary field combining biology, computer science, and mathematics to analyze and interpret biological data, particularly large-scale datasets such as genomic sequences, proteomic profiles, and molecular assays.

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6
Q

DNA and RNA (as Biomarkers)

A

DNA is the genetic blueprint of an organism, while RNA serves as the intermediary that translates DNA instructions into proteins. Mutations, deletions, or insertions in DNA can lead to genetic disorders, cancers, or infections, while changes in RNA can be markers of gene expression or the presence of viral infections.

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7
Q

Genome

A

he complete set of an organism’s genetic material, including all of its DNA (or RNA for some viruses). A genome contains all the information needed to build and maintain the organism, encoded in sequences of nucleotide bases (adenine, thymine, cytosine, and guanine in DNA).

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8
Q

Proteome

A

The entire set of proteins that can be expressed by the genome of an organism, tissue, or cell at a given time under specific conditions. The proteome varies depending on cell type, stage of development, and environmental factors.

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9
Q

genetic sequence

A

The precise order of nucleotides (A, T, C, and G) in a strand of DNA or RNA. Genetic sequences provide the instructions for the synthesis of proteins and functional RNA molecules.

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10
Q

Genetic Testing

A

involves analyzing DNA to detect mutations or variants associated with inherited diseases (e.g., cystic fibrosis, sickle cell anemia). Genetic testing is also used to identify susceptibilities to certain conditions, such as cardiovascular diseases or cancers.

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11
Q

Viral Load Testing

A

In the context of infectious diseases, viral load tests measure the amount of virus (e.g., HIV, Hepatitis C) present in the bloodstream, helping to gauge disease progression and treatment efficacy.

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12
Q

Infectious Disease Diagnostics

A

These tests use PCR or other techniques to identify the presence of pathogens, such as bacteria, viruses, or fungi, by detecting their genetic material. Examples include tests for COVID-19, tuberculosis, and sexually transmitted infections (STIs).

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13
Q

Pharmacogenomics

A

molecular diagnostic testing that evaluates how an individual’s genetic makeup affects their response to drugs. This is particularly important in cancer treatments where certain mutations make tumors resistant to specific drugs, guiding personalized therapy.

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14
Q

CRISPR-based Diagnostics

A

Diagnostic platforms leveraging CRISPR technology to detect specific genetic sequences with high precision. These diagnostics often use Cas enzymes, which are engineered to produce detectable signals upon recognizing target DNA or RNA.

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15
Q

Liquid Biopsy

A

Liquid biopsy, a non-invasive technique that detects circulating tumor DNA (ctDNA) in blood, offers a promising alternative to traditional tissue biopsies. It allows for real-time monitoring of cancer and the detection of minimal residual disease.

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16
Q

Biosensors

A

The development of biosensors for molecular diagnostics promises real-time, portable testing, potentially revolutionizing disease detection at the point of care, including home-based testing.

17
Q

HEDIS and STAR metrics

A

Standardized performance measurement systems used in healthcare to assess the quality of care provided by health plans.

HEDIS (Healthcare Effectiveness Data and Information Set): Evaluates clinical performance, patient satisfaction, and preventive care.
STAR Ratings: CMS's rating system for Medicare Advantage plans based on HEDIS metrics and other factors.
18
Q

HBD (HbA1c)

A

Glycated hemoglobin, a measure of average blood glucose levels over the past 2-3 months, used for diagnosing and monitoring diabetes.

19
Q

KED (uACR / eGFR)

A

uACR (Urine Albumin-to-Creatinine Ratio): Detects kidney damage by measuring albumin levels in urine.
eGFR (Estimated Glomerular Filtration Rate): Assesses kidney function by estimating the filtration rate of kidneys.

20
Q

COL (Colorectal Cancer Screening)

A

Preventive screening methods for colorectal cancer, including colonoscopy, stool tests (FIT, gFOBT), and CT colonography.

21
Q

toxicology

A

The study of the effects of chemicals, drugs, and toxins on biological systems, focusing on poisoning, overdose, and drug interactions.

22
Q

comprehensive drug testing

A

Testing that identifies a wide range of drugs and their metabolites in biological samples, such as urine, blood, or hair.

23
Q

treatment adherence

A

The extent to which patients follow prescribed treatment regimens, including medications, therapies, and lifestyle changes.

24
Q

Molecular Diagnostics

A

A type of medical diagnostic technique that uses molecular biology, such as DNA, RNA, and proteins, to analyze and identify disease-causing agents, genetic disorders, and abnormalities. It includes technologies like PCR, NGS, and others to detect specific genetic markers.

25
Genetic Profiling
The process of analyzing an individual's genetic material to identify variations in their genes. This profiling helps understand disease susceptibility, genetic disorders, and personalized medicine approaches.
26
RT-PCR (Reverse Transcription PCR)
A variation of PCR used to detect and quantify RNA. RT-PCR first converts RNA into complementary DNA (cDNA) using reverse transcriptase and then amplifies it using PCR.
27
Assay
A scientific test or procedure designed to measure the presence, concentration, or activity of a substance, such as DNA, RNA, proteins, or pathogens, typically for diagnostic purposes.
28
Lab-Developed Test (LDT)
A diagnostic test that is designed, manufactured, and used by a single laboratory, which is not FDA-approved but is instead regulated under the Clinical Laboratory Improvement Amendments (CLIA).
29
Genetic Marker
A specific sequence of DNA that can be associated with a particular disease or condition, used for diagnosing genetic disorders or for personalizing treatments.
30
Single-Nucleotide Polymorphism (SNP)
A genetic variation that occurs when a single nucleotide (DNA building block) is replaced by another. SNPs can influence disease susceptibility, drug responses, and various traits.
31
DNA Extraction
The process of isolating DNA from a biological sample (e.g., blood, saliva, tissue) to use in molecular testing. DNA extraction is the first step in many molecular diagnostic tests.
32
Genotyping
The process of determining the genetic constitution of an individual by examining their DNA sequence to identify specific genetic variations or mutations.
33
Allele-Specific PCR
A variation of PCR that allows for the detection of specific alleles (gene variants) in a sample by designing primers that specifically amplify a target allele.
34
Clinical Laboratory Improvement Amendments (CLIA)
A set of regulations in the U.S. that ensure the quality of laboratory testing by setting standards for laboratory operations and testing procedures to ensure accuracy and reliability.
35
RNA Sequencing (RNA-Seq)
A next-generation sequencing technique used to examine the transcriptome, providing detailed information about gene expression levels and detecting variations in RNA.
36
Quantitative PCR (qPCR)
A variation of PCR that allows for the quantification of DNA or RNA in a sample. qPCR can measure the amount of target genetic material and is often used for gene expression analysis or viral load testing.
37
In Vitro Diagnostic (IVD)
Diagnostic tests performed outside the human body, often using samples like blood, urine, or saliva to diagnose conditions.
38
Molecular Pathology
The branch of pathology that uses molecular biology techniques to study disease at the molecular level, often to understand genetic mutations and biomarkers that influence
39
CRISPR
A revolutionary gene-editing technology derived from bacterial immune systems. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) uses the Cas9 protein to cut DNA at specific sites, enabling precise genetic modifications.