Viruses Flashcards

1
Q

How are viruses classified?

A
  • specificity of infection
  • genome
  • structures
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2
Q

Outline the innate immune response

A
  • non-specific
  • Produces soluble factors
  • Phagocytic cells
  • Immediate and early
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3
Q

Outline adaptive immunity

A
  • Takes 1-2 weeks
  • highly antigen specific
  • memory based
  • Activation of B+T cells
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4
Q

Outline the features of influenza type A virus

A
  • SSRNA virus
  • Envelope virus carrying glycoproteins
  • Infects birds and mammals
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5
Q

What are the 2 main vaccine targets on influenza type A virus?

A
  • Hemagglutinin
  • Neuraminidase
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6
Q

What is antigenic drift?

A

Minor antigenic changes in glycoproteins on the surface of a virus

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7
Q

What is antigenic shift?

A

The abrupt and major changes in glycoprotein

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8
Q

What causes antigenic drift in influenza A?

A
  • Has an RNA genome
  • Replication of RNA has high mutation rate
  • No proofreading
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9
Q

Why does the flu vaccine not work every year?

A
  • The annual flu vaccine is based on predicting the HA and NA antigens
  • Mutations in HA and NA surface proteins which occur may be different to the ones predicted
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10
Q

How does Antigenic shift occur?

A
  • Genetic reassortment of HA and NA genes occurs in an intermediate host
  • This leads to recomination or reassortment of viral strains
  • This often occurs when a flu strain jumps species
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11
Q

Outline the features of HIV-1 retrovirus

A
  • RNA envelope virus
  • Replication requires reverse transcriptase
  • Infects immune cells
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12
Q

What type of cells does HIV infect?

A

CD4+ helper T cells

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13
Q

What are the features of Reverse transcriptase?

A
  • Replicates the viral RNA genome into DNA
  • Not normally expressed in human cells
  • Lacks 3’-5’ proofreading so high error rate
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14
Q

What are impacts of reverse transcriptase not having prrofreading?

A
  • Mutations accumulate
  • Mutations which affect reverse transcriptase itself occur
  • Affects the therapeutic outcome
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15
Q

How can viral replication be inhibited with nucleoside analogues?

A
  • DNA synthesis joins 3’OH of growing DNA chain to 5’ phosphate group of the incoming dNTP
  • If the 3’OH is blocked (by analogues) then DNA chain growth will terminate
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16
Q

Give the name of a treatment for HIV?

A

AZT

17
Q

How does AZT work to treat HIV?

A
  • Acts as a nucleoside analogue
  • Lacks 3’ OH so causes chain termination
18
Q

How can AZT target HIV infected cells specifically?

A

Reverse transcriptase is 100x better at incorporating AZT into DNA than DNA polymerase

19
Q

What sort of virus is herpes simplex?

A

Double stranded DNA virus

20
Q

Give the name of a treatment for herpes simplex virus

A

Acyclovir

21
Q

How does acyclovir have specificity?

A
  • For the drug to be activated it must have a phosphate group attached within the cell by thymidine kinase
  • The viral thymidine kinase is much better than host TK at phosphorylating
22
Q

Which enzyme is used to phosphorylating acyclovir?

A

Thymidine kinase

23
Q

How does acyclovir treat herpes?

A

Causes replication chain termination due to a lack of 3’OH

24
Q

What is an oncogenic virus?

A

A gene suspected of causing cancer in organisms

25
Q

What is a long terminal repeat?

A

A sequence present at the ends of viral genome which provides promoter activity and drives gene expression

26
Q

What are the 3 ways viruses can cause cancer?

A
  1. Virus inserts oncogene into host genome
  2. Insertion of virus brings a strong promoter to activate a cellular proto-oncogene
  3. Insertion of a virus (which lacks an oncogene) distrupts and inactivates a tumour suppressor gene
27
Q

What is a proto-oncogene?

A

A normal cellular gene capable of causing cancer when dysregulated