Unit 4a Flashcards
Peptidoglycan layer
rigid mesh, surrounds cytoplasmic membrane
Peptidoglycan → allows for maintenance of shape and resistance of osmotic pressure
Unique and required bacterial structure
Great target for many antibiotics
Recognized by host innate immune system
Structure of peptidoglycan layer
Polymer of repeating units of 2 hexose sugars, crosslinked
N-acetylglucosamine (GlcNAc)
N-acetylmuramic acid (MurNAc): linked to tetrapeptide chains with AA unique to bacterial cell walls
Capsules
gelatinous outer surface layer, coats surface of bacterial cells
Consist of complex polysaccharides
Function: Enhance virulence, resist phagocytosis
Antigenic (used in vaccines)
-Protein-capsular polysaccharide CONJUGATE vaccine may be required to vaccinate young children
Glycocalyx
form microbial biofilms (communities of bacteria)
“Slime layer” connects/embeds bacteria together/to surfaces
Protects cells from phagocytosis, host defenses (complement, antibody, defensins), limits access of abx to cells embedded in “slime layer”
Flagella
Originate in cytoplasmic membrane
Function in motility, bacterial chemotaxis
Peritrichous = flagella distributed over their surface Polar = one/many flagella at one end
Move in a rotation: Run and Tumble based on direction of rotation
Antigenic (H antigens) - used in vaccines
Pili
long slender, proteinaceous antigenic, hair-like structure on surface of bacteria
Role in adherence to surfaces/tissues
Antibody can block adherence/confer resistance to infection
Sex pili → role in bacterial conjugation
Bacterial Secretion Systems
deliver proteins from cytoplasm of bacteria directly to target cell → alter cell function (alter actin cytoskeleton, host signaling, transcription)
Bacterial cytoplasmic membrane
- physiological barrier between inside/outside of bacterial cell
- Lipid bilayer (phospholipids, proteins (60-70%), NO sterols)
-Selective permeability
Only permeable to uncharged, hydrophobic molecules, smaller than glycerol
Contains electron transport system → generate proton motive force during respiration
Bacterial cytoplasm
aqueous solution, proteins + metabolites
-contains DNA (no nuclear membrane)
Bacterial ribosomes
70S, mRNA can be polycistronic
Bacterial nucleoid
DNA of bacteria located in this distinct region
DNA tightly packed, supercoiled
No nuclear membrane → transcription/translation coupled
Bacterial chromosome
single ds-circular DNA
Bacterial plasmid (4)
extrachromosomal, self-replicating, DNA molecules
Smaller than chromosomes
Not essential for viability
R Factors: genes that carry resistance to antibiotics
Bacteriophages
viruses that infect bacteria
Can integrate into bacterial chromosomes and replicate as part of the chromosome
Gram+ bacteria
Thick, extensively cross-linked peptidoglycan layer, also contains:
- teichoic acids
- Lipoteichoic acids
Techoic Acids
repeating polyglycerol-P or polyribitol-P backbone covalently attached to peptidoglycan layer
-embedded in peptidoglycan layer of gram + bacteria
Lipoteichoic acids
attached to underlying cytoplasmic membrane - anchors cell wall to membrane
present in gram+ bacteria
Function of teichoic acids (3)
1) Ion homeostasis
2) Adherence and colonization
3) Interacts with innate immune system through TLR for bacterial recognition and inflammation
Gram + stains ______, while gram - stains _______
purple
red
Bacterial endospores
Produced by some G+ bacteria (Clostridium, Bacillus)
Dormant (non-growing, non-metabolising) - resting stage to endure tough times - when environment improves it will grow
Highly resistant to environmental stresses, high temp, disinfectants, desiccation, oxygen
Gram- bacteria
Thin, sparsely cross-linked peptidoglycan layer with other major components on exterior of peptidoglycan
-Second outer membrane
What is contained in second outer membrane of gram-neg bacteria? (4)
asymmetric lipid bilayer
1) Lipopoilysaccharide
2) Lipoproteins
3) proins
4) phospholipids
Lipopolysaccharide (LPS) made up of ______, ______, and ______ located exclusively on the _______ of the second outer membrane.
LPS can be recognized by _________
Lipid A (endotoxin) Core polysaccharide O side chain oligosaccharides (somatic antigens, O antigen)
outer leaflet
innate immune system –> inflammation and endotoxic shock
Bacterial growth
Growth via binary fission → two cells of equal size
All bacteria are thus the same “age”
4 phases of bacterial growth
1) Lag phase
2) Exponential phase
3) Stationary phase
4) Death phase
Lag phase
period of physiologic adjustment (inoculum)
Establish proper intracellular environment for optimal growth
Exponential phase
rate of cell division maximal for available nutritional conditions
Stationary phase
essential nutrients are consumed, toxic products of metabolism accumulate
Cell growth slows or ceases
Slow growing cells can be resistant to abx
Where bacteria spend most of their time in nature
Death phase
number of viable bacteria decrease over time
Heterotrophic vs. autotrophic bacteria
Heterotrophic bacteria: require organic carbon source
Autotrophic: obtain carbon exclusively from CO2
Fastidious bacteria
require, in addition to sources of carbon/energy, a number of essential growth factors
Obligate intracellular bacteria
growth within eukaryotic cells, cannot be cultivated on artificial media
Aerobic bacteria
require oxygen for growth
Produce ROS, and thus must produce catalase, superoxide dismutase, etc. to protect themselves against ROS
Anaerobic bacteria
do not require oxygen for growth
Indifferent bacteria
ferment in presence or absence of O2
Facultative bacteria
respire with O2, ferment in absence of O2
Sporulation
response to adverse nutritional condition
Spores
specialized cells produced by certain bacteria when nutritional supply is limited
Adapted for prolonged survival under adverse conditions
Can convert back to vegetative cells via germination
______ + _______ = “Energy Currency”
ATP + electrochemical gradient
Fermentation
catabolic, organic compounds are e- donors and acceptors
No net oxidation of substrates
Anaerobic, facultative/indifferent bacteria that grow under anaerobic conditions must get energy via fermentation of organic substrates
CANNOT do respiration
Respiration
generate ATP via e- transport, use O2 as final e- acceptor
Anaerobic respiration → use inorganic substrates as e- acceptor
Mechanisms of genetic variation (3)
1) Spontaneous Mutation
2) Recombination
3) Acquisition of new DNA segments
Spontaneous mutation
spontaneous single base change, deletion, insertion
Selective pressure for preferential growth of preexisting mutant within a population
→ resistance to antimicrobials, DOES NOT HAPPEN BERY OFTEN
Recombination
Site-specific or homologous recombination within a particular organism
OR genetic exchange/recombination between closely related organisms
→ new strains, new properties
Acquisition of new DNA segments
acquire new genes by LATERAL TRANSFER from other bacteria, or unrelated species
→ Alters virulence potential, survival characteristics, or antimicrobial resistance
Transposable elements
segment of DNA contained in bacteria/phage chromosome/plasmid that is enzymatically moved from one DNA location to another
(can make it mobile if it goes to a plasmid!)
How can you acquire new DNA segments? (4)
1) Transposable elements
2) Bacteriophage conversion
3) Acquisition of plasmids
4) Acquisition of pathogenicity islands
Conjugative plasmids
self-transmissible, mediate their own transfer between cells
Non-conjugative plasmids
mobilizable - can be passively transferred during conjugation
Can still be transferred by transformation or transduction
Bacterial plasmids can be transferred by _________ in gram+ bacteria
generalized transduction
Pathogenicity Islands
Insertions of one or more genes when comparing the genomes of two isolates of same species
-Encode genes that influence pathogenicity of strain
-Often appear as if acquired from an unrelated organism
(Genetic characteristics of bacterial viruses)
-Acquisition/loss important for evolution of pathogen
Transformation
Exchange of naked DNA of naked plasmid DNA (released from lysing cells)
DNA uptake into bacterial chromosome occurs only at certain points in growth cycle - specialized proteins needed to mediate uptake
Transduction
Gene transfer mediated by bacteriophage
Bacteriophage transfers segments of plasmid or chromosomal DNA from one cell to another
Conjugation
Genetic transfer dependent upon physical contact between donor and recipient cells - mediated by bacterial plasmids
Mechanisms of conjugation:
1) Cells come in contact, conjugation initiated (sex pilus bridges F+ and F- cell)
2) ss nick on oriT and binding of protein at 5’ end (in F+ cell) → initiate rolling circle replication
3) ss DNA transferred to F- cell via bridge and complementary strand synthesized
4) Cells separate at end of transfer
Conjugative transposons
DNA element that can excise themselves to form a covalently closed circular intermediate.
-circular intermediate can either reintegrate in the same cell (intracellular transposition) or transfer by conjugation to a recipient and integrate into the recipient’s genome (intercellular transposition)
Can encode abx resistance (esp Tetracycline)
Lytic state
Adhere to bacteria, inject DNA into bacteria
Progeny virus assembly/multiplication in cell and host cell lysis
Lysogenic state:
host cell remains viable, infecting phage DNA maintained by host cell in noninfectious state = prophage
Viral DNA injected, integrates into host chromosome → replicated as part of host chromosome (keep lytic stuff silent)
Maintained by prophage-encoded repressor protein that inhibits lytic development (can transform to lytic state)
Can convert phenotype of bacterial cell by formation of a lysogen
Prophage
phage DNA passively replicated as part of bacterial chromosome
Lysogenic Conversion
Temperate bacteriophages encode gene only expressed during lysogenic state → new phenotype in lysogenic host
Genes controlling the new phenotypic trait found ONLY as a component of the phage genome (not normal constituent of bacterial genome)
Generalized transduction
Any segment of donor cell genome may be passed into another cell
Sometimes get bacterial chromosomal DNA in virus capsule instead of viral DNA as an error during phage assembly
→ Integrate piece of bacterial DNA into another bacteria cell
Staphylococcus aureus is ______, _______ and ______ positive
catalase, coagulase, and gram
Staph. aureus abx resistance (3)
ABX resistance a serious concern
1) Penicillin-R
2) Methicillin-R (MRSA)
3) Vancomycin-R (emerging)
Manifestations of disease in staph aureus is…
STRAIN DEPENDENT
3 common types of diseases with staph aureus
- Cutaneous infection (localized focal abscess, can still spread)
- Toxinogenic infections (SSSS, TSS, food poisoning)
- Pneumonia (immunosup. with ~50% mortality)
staph aureus has ______, _______, ________ and _______ associated with its cutaneous infections
1) fibrin capsule
2) coagulase
3) alpha-toxin
4) foreign bodies