Unit 4 - Ch. 21: Genomics Flashcards
What is a genome?
The total genetic material of an organism
What is genomics?
Molecular analysis of an organism’s entire genome
What are molecular markers?
Polymorphic DNA sequences used to map genes or track inheritance
What is RFLP?
A type of molecular marker that uses restriction enzymes to create different fragment sizes
What are microsatellites?
Short repeated DNA sequences used as PCR-amplified markers (e.g., (CA)n
What is an STS (sequence tagged site)?
A specific microsatellite region amplified using PCR
What is shotgun sequencing?
A method that sequences many small DNA fragments and assembles them computationally
What was the Human Genome Project?
A 13-year effort (1990–2003) to sequence the human genome and develop genome tech
What are examples of next-generation sequencing (NGS) technologies?
Illumina, Pacific Biosciences SMRT, Nanopore
What is metagenomics?
Studying genetic material from environmental samples (e.g., soil, water)
What is RNA-Seq used for?
Identifying and comparing gene expression across different samples or conditions
How does habitat fragmentation affect genetics?
↓ Genetic diversity, ↑ inbreeding, ↓ connectivity between populations
What was studied in the Sabatia angularis case?
How land use and soil environment affect population genetics and connectivity