Unit 3.1 - biological molecules Flashcards
what are monomers?
they are the smaller units from which larger molecules are made
what are polymers?
they are molecules from a large number of monomers joined together
what are carbohydrates made up of?
hydrogen, oxygen and carbon. they have a general formula of (CH2O)n
what are carbohydrates?
they are polymers whose monomers are simple sugars
what are monosaccharides?
they are the monomers from which larger carbohydrates are are. glucose, galactose and fructose are common examples
what is a condensation reaction?
it joins the two molecules together with the formation of a chemical bond and involves the elimination of a molecule of water
what does a condensation reaction between two monosaccharides form?
a glycosidic bond
how are disaccharides formed?
by the condensation of two monosaccharides
what is maltose?
its a disaccharides formed by condensation of two glucose monomers
what is sucrose?
its a disaccharides formed by condensation of a glucose molecule and a fructose molecule
what is lactose?
its a disaccharides formed by condensation of a glucose molecule and a galactose molecule
what are glucoses two isomers?
a glucose and b glucose
what categories do monosaccharides fall into?
- 3 carbons triose
- 4 carbons tetrose
- 5 carbons pentose
- 6 carbons hexase
why is the reaction between two monosaccharides a condensation one?
when 2 glucose monomers are joined by one oxygen atom, the two hydrogens and single oxygen atom are lost which form water
what happens during a condensation reaction?
the reaction joins two molecules (monosaccharides) together with the formation of glycosidic bond and involves the elimination of a molecule of water
what is a hydrolysis reaction?
it breaks a chemical bond between two molecules and involves the use of a water molecule
what are the polysaccharides?
starch, glycogen and cellulose
how are glycogen and starch formed?
by the condensation of alpha glucose
how is cellulose formed?
the condensation of beta glucose
what is the structure of starch?
its a mixture of two polysaccharides of alpha glucose - amylopectin and amylose
what is amylopectin?
a long, branched chain of alpha glucose, its side branches allow the enzymes that break down the molecule to get at the glycosidic bonds easily so glucose can be released quickly
what is the amylose like?
a long unbranched chain of alpha glucose, the angles of glycosidic bonds give it a coiled structure, like a cylinder. this makes it compact, so its good for storage as you can fit more into a small space
what is starch used as and for?
- a storage molecule, its compact (amylose) to fit into small spaces
- it can be broken down quickly to release glucose (amylopectin)
- its large and insoluble so has no impact on osmosis
what is glycogen?
its a polysaccharide of alpha glucose. its structure is similar to amylopectin but is shorter and has more side branches, which means stored glucose can be released quickly which is important for energy release in animals.
- also very compact and insoluble
what is cellulose?
its found in plant cell walls, its not an energy store it has a structural purpose.
what is the structure of cellulose like?
made of lomg, unbranched chains of beta glucose.
- when beta glucose molecules bond they from straight cellulose chains
- the chains are linked together by hydrogen bonds to form strong microfibrils which means cellulose provides structural support
how do the polymers lie in cellulose?
they lie close to one another and cross linkages form from hydrogen bonds between them. this makes cellulose strong and stable, which is what makes the cell strong
What is a water molecule made up of?
Two atoms of hydrogen and one of oxygen, it has no overall charge and has both slight negative and positive poles and is dipolar
How do hydrogen and water bond?
The positive pole of one water molecule will be attracted to the negative pole of another water molecule. The attractive force is the hydrogen bond
What are hydrogen bonds like?
Each bond is fairly weak (tenth as strong as a covalent bond), many of them together form important forces that cause the molecules to stick together
What happens due to water molecules sticking together?
It takes more energy (heat) to separate them than would be needed, so the boiling point of water is higher than expected
- without hydrogen bonding, water would be a gas
Why does water have a high specific heat capacity?
the hydrogen bonds between water can absorb a lot of energy, so it has a high SHC. its useful in living organisms as it means that water doesn’t experience rapid temperature changes, this makes water a good habitat as the temp under water is likely to be more stable than on land
- also remain stable inside organisms helping them to maintain a constant body temp
What is the latent heat of vaporisation?
it takes a lot of energy to break the hydrogen bonds between water molecules, so water has a high LHofV as a lot of energy is used up when water evaporates
what is cohesion in water?
the tendancy of molecules to stick together is known as cohesion; with its hydrogen bonding, water has large cohesive forces & these allow it to be pulled up through a tube eg xylem vessel AKA capillary pressure in plants.
what happens when water molecules meet air?
they tend to be pulled back into the body of water rather than escaping from it. this force is cohesion tensions and means that the water surface acts like a skin and is strong enough to support small organisms due to the flat surface as it reduces pressure.
how is water used in metabolism?
- water is used to break down many complex molecules by hydrolysis eg proteins into amino acids
- its also produced in condensation reactions- chemical reactions take place in an aqueous medium and is a major raw material in PHs
What does water readily dissolve?
- gases eg oxygen and carbon dioxide
- waste eg ammonia and urea
- inorganic ions and small hydrophilic molecules (water loving) eg amino acids, ATP and monosaccharides
- enzymes, whose reactions take place in solution
what are the other important features of water?
- its evaporation cools organisms and allows them to control their temperature
- its not easily compressed and therefore provides support
- its transparent so aquatic plants can photosynthesis and light rays can penetrate the jelly like fluid that fills the eye
what’s the test for reducing sugars?
- add benedicts solution and heat in a water bath (at least 85 degrees) almost boiling point
- red/orange/yellow colour means reducing sugar is present
what’s the test for non reducing sugars?
- a negative test at first with benedicts
- boil the sugar with HCL for 5mins
- neutralise with sodium carbonate
- re-test with benedicts
- = positive test
what are lipids like?
- they are made up of carbon, oxygen and hydrogen
- they have less oxygen than carbohydrates
- they are insoluble in water -> hydrophobic
- they are soluble in alcohol and acetone (organic solvents)
what do lipids do?
- cell membrane - phospholipids provide flexibility and control movement of substances
- protection - fat is around delicate organs
- insulation - fats are slow conductors of heat so a layer of this in the body preserves heat, they also insulate neurones (myelin sheath)
- energy - when oxidised fats release x2 energy of carbohydrates whilst releasing water
- waterproofing - plants/insects rely on waxy cuticles to make them waterproof eg mammals release an oily secretion
what are triglycerides?
they are formed by the condensation of one molecule of glycerol and three molecules of fatty acids
what are the ester links?
the ester bonds are formed from a condensation reaction between glycerol and a fatty acid, they can be broken down by hydrolysis.
- the 3 fatty acids are bound to the glycerol via ester linkages.
what is produced/released when a triglycerides are formed?
A total of 3 molecules are produced when a triglyceride form, one water molecule if removed from each ester bond
why are triglyceride’s non polar?
they are unable to form hydrogen bonds with water
what is a saturated triglyceride/fatty acid?
a fatty acid where all the carbon-carbon bonds in the hydrogen chain are single bonds
what is a unsaturated fatty acid?
a fatty acid where there are double bonds between some carbons so potentially more hydrogen could bind
what is a monounsaturated fatty acid?
a fatty acid where one of the carbon-carbon bond is a double bond
what is a polyunsaturated fatty acid?
a fatty acid where more than one carbon-carbon bond is a double bond
what are phospholipids?
they are based on glycerol but only two fatty acid molecules are bonded to the glycerol, the third is replaced by a phosphate group
what is the structure of phospholipid?
the phosphate group is iconic and the hydrogen chains of the two fatty acids are covalently bonded, there are two regions
- hydrophilic phosphate ‘head’
- hydrophobic ‘tails’ which HATES water
what happens when phospholipids are placed in water?
phospholipids become organised into a bilayer, in which the hydrophilic head faces outwards into the water and the hydrophobic tails face inwards, away from the water.
- the phospholipid bilayers are the bases of plasma membranes
What are inorganic ions?
They are found in organisms where they occur in solution (dissolve easily) in the cytoplasm of cells and in bodily fluids as well as part of larger molecules
What may inorganic ions be in?
Concentrations that range from very high to low
What do inorganic ions perform?
A range of functions due to their size and functiona, the specific function a ion performs is related to its properties