unit 1: Intro and review of organic compounds Flashcards
_____: the science of sub. that occur in living tiss. and the metab, fxn, and excretion of metab wastes of these sub. by the tiss
biochemistry
_____ is the breakdown of compounds
cabolism
____ is the building of compounds
anabolism
def: _______ : originating from within an organism
endogenous
Where does the body obtain substance that make up the body
- endogenous ex: liver making glucose
2. diet
What happens when the body catabolizes compounds?
releases biochemically available energy
_____: occur as salts, free ions or bound to organic molecules
inorganic compounds
inorganic compounds occur as ____, free ____, or bound to ______
salts
ions
organic molec.
what makes a compound an “organic compound”
carbon compounds
exception is urea
What is the one exception of an organic compound ?
urea
O= C(NH2)2
_____ are the most reactive part of a molec
functional group
Organic compounds can possess ________ functional groups
one or more
What is used to classify a compound?
functional group
Name in order the 6 functional groups that are prioritized from 1 through 6
- Carboxyl -COOH
- Aldehyde -CHO
- Ketone - >C=O
- Alcohol -OH
- alkyne Carbon triple bone
Carboxyl group
-COOH
Aldehyde group
-CHO
Ketone group
> C=O
Alcohol group
-OH
alkyne group
triple carbon bond
Amine group
-NH2
Ether
-ROR
Aryl
-Ar
Halogen
-X
Alkyl
-R
Alkane
C-C
What is a conjugate ring
a ring that has alternating double bonds
What are hydocarbons composed of?
only C and H
_______ are single convalent bonds between carbons
alkanes
______ alkanes are open chain hydrocarbons
aliphatic
straight chain
_____ are alpha amino acids
alanine
equation for H’s in an alkane
2n+2
___________: are cyclic carbone alkanes
alicyclic (or carbocyclic)
2n
_____ are double bonded carbons
alkenes
beta-carotene is an example of an alk___
alkene
_____ alkenes are open chain hydrocarbons
aliphatic
?? _____ are non-aromatic rings
alicyclic
____ are conjugated rings that alternate double bonds
aromatic
Equation for H’s on a alkene
2n
_____: two compounds with the same molecular formula but different structural formulas
isomer
structural isomers are?
two compounds with the same molecular formula but different sructural formulas
_____: two molecules that have the same molecular and structural formulas but different spatial arrangement and different properties
stereoisomerism
Stereoisomers have the same molecular and structural formula but different _______
spatial arrangement –> the 3D orientation is different
thus making different properties
Cis and trans isomers are ______
stereoisomers
_____ are triple bonds btw carbons
alkynes
are alkynes found in living tissue?
no
-al
aldehyde
another name for functional group
alkyl
_____: is a functional group derived from from the removal of a hydroxyl group
acyl
______ is sugar alcohol
- ol
- alcohol is insoluble & our body as a fatty chain so it can store it
3 alcohols found in living tissue
- glycerol
- D-sorbitol
- cholesterol
_____ is a hydroxyl group attached to a cyclic aromatic structure
phenol
catacholamine has a _____ structure
phenol
_____ is a cyclic=O
quinone
not aromatic - has double bonds but not conjugate
Ubiguinone (Coenzyme Q or CoQ) is a component of the ______ in the ____
electron transport chain in the mitochondria
_____ can be formed by the condensation of acid and alcohol
ester
Triglycerides are formed from one ___ and three ______
1 glycerol
3 fatty acids
Amines are formed by : _____
replacing one or more H of the NH3 with an alkyl
_____: formed by carboxylic acids and amines
Amide
( amines have an H replaced by a different fxn group. Amides– has a carboxylic acid
______ are used to make amino acid chains
amides
carboxylic acid + amine = ____
amide
amide bond is a _______ bond
peptide
_____: oxygen btw 2 alkyl groups
ether
R-O-R
tetrahydrofuran is a ______
cyclic ether
- a base for carbs
tetrahydropyran is a ___
cyclic esther
- a base for carbs
two cyclic ethers that are the bases for carbs
tetrahydrofuran (5 carbons) (5 carbons)
tetrahydropyran
the phospholipid bilayer is embedded with ___ & ___
protein and cholesterol
______ : are receptors, transporters, ion channels, cytoskeleton in the cell membrane
protein
___: affect fluidity of the cell membrane
cholesterol
______: is the soluble part of cytoplasm. contains water soluble cellular sub.
(such as amino acids, glucose, vit. , ions, and enzymes
cytosol
______: is a double membrane structure, the power plant of the cell
mitochondria
_____ : works to deamination
mitochondria
removal of amine
______:in the cell helps to synthesis urea
mitochondria
______: are vesicles with hyrolytic enzymes to degrade intracellular organic compounds
lysomes
_______: contains enxymes for glycosylation of proteins
golgi apparatus
- substance sto be secreted from the cell are packed into vesicles
Define glycosylation
adding sygar to protein
_____ : contains enxymes for phospholipid, steroid, proteoglycan synthesis.
Endoplasmic reticulum
with ribosomes, _______ systhesis protein
Rough ER
_____: vescicles structures that contain oxidase
peroxisome
Mitochondria synthesises ATP by a process called ______
oxidative phosphorylation
_____ does protein synthesis within the cell
ribosomes
cytoplasm stores ____ & ____
glycogen and fat
initial catabolism occurs in the ____
cytoplasm
The nucleus is surrounded by a ___
nuclear membrane
The nucleus contains what 3 things?
chromosomes
nucleolus
nucleoplasm
_____: made of rRNA, when complexed with certain proteins form ribosomes
nucleolus
_____: contains soluble sub. and enzymes in the cell
Nucleoplasm
____: is composed of DNA and proteins
chromosomes
_____ are segments of DNA
genes
The primary fxn group in amino acids, peptides, and proteins is ____
COOH
______: is a compound consistng of repeating structural units
polymer
Primary fxn groups in carbohydrates are : _____&____
aldehyde or ketones
Fats/oils have ____ fxn group
ester (c=oo)
Fatty acids have ____ fxn group
carboxylic acid
steroids have _____& _____ fxn groups
alcohol or ketones
The primary fxn group in a nucleic acid is ____
phosphoric acid
- polymers are phosphodiester