Unit 1: Evolution Flashcards

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1
Q

Basic Face Concerning Life on Earth (4)

A

Earth formed 4.3 to 4.5 Ga (billion years) ago; first life 3.5 to 3.8 Ga

Stromatolites as one of the first organisms on Earth at ~ 3.7 Ga.

3 Distinct Lineages of Organisms: Bacteria, Archaea, Eukarya

Ursus spelaeus vs. Panthera leo spelaea: former is genus but latter is a subcategory of that genus

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2
Q

Eukarya: General Characteristics, [X]-karyon, Life Cycle

A

aka Fungi – comprised of filaments (hyphae), where many hyphae together become mycelium

General Characteristics: non-motile filamentous (not-moving, thin, long) absorb nutrients; cell walls composed of chitin; a/sexual reproduction; heterotrophic decomposers

MONOkaryon: each cell contains a single nucleus
DIkaryon: cells of different hyphae fuse with each nuclei remaining distinct within the new hypha (present in Karyogamy)

Fungi Life Cycle: 1. Meiosis (division of cells into four haploids); 2. Plasmogamy (cytoplasm of two parent cells fuses together without the fusion of nuclei, effectively bringing two haploid nuclei close together in the same cell); 3. Karyogamy (final step in the process of fusing together two haploid eukaryotic cells to create a diploid)

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3
Q

Plants: General Characteristics, Algae Groups

A

General Characteristics: cellulose cell wall, photosynthesis, possess alternation of generations

Algae: both a/sexual reproduction where alternations of generations occur in the sexual cycle
Algae Group 1: unicellular only (eg. plankton); common types include diatoms and dinoflagellates
Algae Group 2: unicellular AND multicellular (eg. seaweeds); most common being red, green, and brown algae

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4
Q

4 Plant Life Cycles to Know

A

Byrophytes, Ferns, Gymnosperms, Angiosperms

BYROPHYTES – eg. mosses and liverworts; small, alternation of generations, dominance of gametophyte, development of archegonium and antheridium; 1. Meiosis (produces haploids wiht sexual being antheridia; asexual being archegonia), 2. Fertilization (fusion of haploids to create diploids)

FERNS – 1. Meiosis (release of spores; sperm use flagella to swim form the antheridia to eggs in the archegonia); 2. Fertilization (zygote develops into new sporophyte w reproductive leaves w spots called sori w clusters of sporangia)

GYMNOSPERMS – 1. Meiosis (female gametophyte w sperm nucleus) 2. Fertilization (ovulate cone and pollen cone as parents to create megaspore; pollen is microsporangia)

ANGIOSPERMS – 1. Meiosis (ovary into megasporadium; microsporocytes into microspore w male gametophyte); 2. Fertilization (egg nucleus germinates)

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5
Q

Chauvet Cave
Aristotle
Great Chain of Being

A

CHAUVETCave: located in Ardeche River Valley, Southern France( ~ 32 ka); has paintings of animals, footprints, cranium on a pedestal

ARISTOTLE: “father of biology”; did dissections

GREAT CHAIN OF BEING: aka scala naturae; an idea of a universal hierarchy; metaphysical concept with gods tiered at the top, humans in the middle, and animals underneath

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6
Q

Nicholas Steno
Law of Superposition
Age of Discovery

A

Nicholas STENO: studied genealogy from theological point of view; provided insight into fossil record: “tongue stones” were sharks teeth, realizes that it must’ve represented something that lived and died

Law of SUPERPOSITION: discovered by Steno; lower levels of stratification are older than upper layers

AGE OF DISCOVERY: Joseph Banks brought botanist James Cook on European exploration (15-17th century)

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7
Q

Natural Theology
Carl Linnaeus
Argument from Design

A

NATURAL THEOLOGY: school of thought to prove the existence of God and divine purpose through observation of nature and the use of human reason; not dependent on revelations

Carl LINNAEUS: created system of binomial nomenclature in Latin; transcended scientific category for all languages → now called taxonomy: inventory of life

ARGUMENT FROM DESIGN: founded by William Paley; organisms exist and function well therefore they were created by a being of high intelligence → watch example (if you go outside and find a watch, you would think that someone had made it because it functions well; same with organisms)

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8
Q

Adaptation
Gradualism
Extinction
Uniformitarianism

A

ADAPTATION: “form fits function” → bird beak example

GRADUALISM: founded by James Hutton; earth changes slowly but incrementally, thereby creating large changes with time → eg. Grand Canyon

EXTINCTION: discovered by Georges Cuvier; realized that some species die off without branching out to other forms of life

UNIFORMITARIANISM: founded by Charles Lyell; says that we can’t assume anything that we can’t see, therefore he pushed for concrete evidence to prove theories

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9
Q

Jean Lamarck (2)
Erasmus Darwin
Alexander von Humboldt

A

Jean LAMARCK:

  • Principle of Dis/Use: parts of an organism’s body that are used become more developed; parts that are not used become smaller and may disappear
  • Inheritance of acquired characteristics: changes achieved over an organism’s lifetime are passed on to its offspring

ERASMUS Darwin: writings inspired his grandson; came up with Zoonomia, aka laws of organic life (deals with pathology, anatomy, psychology and the functioning of the human body)

Alexander von HUMBOLDT: discovered biological changes in altitude by surveying plants along the way to the top of a volcano; inspiration to Darwin

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10
Q

Charles Darwin (4)

A

HMS BEAGLE: five year contract; discovered many things; read Lyell and Humboldt; collected fossils and specimens through hunting expeditions; saw world in comparison framework

LAW OF SUCCESSION OF TYPES: finding that living species generally resembled fossil forms of species from their same location

GALAPAGOS ISLANDS: endemic fauna; volcanically created chain of islands that was a good distance from South American coastline, preventing most species from traversing the coast; created an insular habitat and exclusive species with differences in form and behavior

SUBSIDENCE OF LAND HYPOTHESIS: refers to the creation of coral atolls (eg. Mo’ orea in the Southern Pacific); coral grows upward and outwards as the inner island disappears → Volcanic island - fringing reef - barrier reef - coral atoll

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11
Q

Morphological convergence
Alfred Russel Wallace
Fecundity

A

MORPHOLOGICAL CONVERGENCE: observed similarities across species in similar but distant environments → e.g. sugar glider and flying squirrel

Alfred Russel WALLACE: unsung hero who collected specimen in the Amazon and worked with Darwin that came up with same ideas but in a different area; working class naturalist who published The Geographical Distribution of Animals

FECUNDITY: large amount of offspring but only a few survive; AKA surplus production of offspring

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12
Q

Individual variation
inheritance
“Struggle for Existence”

A

INDIVIDUAL VARIATION: Genetic differences that are usually heritable; lead them to survive better in the wild (natural selection) or be chosen for animal husbandry (artificial selection)

INHERITANCE: preservation of favored traits thru process of genetic transmission of characteristics from parent or ancestor to offspring

“STRUGGLE FOR EXISTENCE”: leads to differential survival / reproduction with successful traits as heritable and preserved due to the characteristics of nature

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13
Q
Pattern of evolution
Explanatory power (6)
A

PATTERN OF EVOLUTION: from Darwin; continuous, slow, gradual; change by “insensible degrees” → eg. Darwinian giraffes

EXPLANATORY POWERr:

  1. Analogy: similarity of function and superficial resemblance of structures that have different origins e.g. wings in different organisms
  2. Convergence: organisms not closely related (not monophyletic), independently evolve similar traits as a result of having to adapt to similar environments or ecological niches
  3. Homology: shared descent from a common ancestor
  4. Vestigial structures: rudimentary organs
  5. Embryology
  6. Fossil record
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14
Q

Difficulties on Theory (3)

A

missing links exist bc of poor preservation of the past

AGE OF THE EARTH: Ussher; Biblical Chronology: Oct 6, 4004 BC, 9:00AM

ORGANS OF EXTREME PERFECTION: critics asked how does a highly functioning organ come to be thru evolution → Darwin argues that the final form came about thru minor steps that have been perfected bc whole parts are developed in useful and gradual stages (Eg. hawk eyes)

BLENDING inheritance: offsprings uniformly blend the features of the parents; theory of pangenesis → eg. two extremes have offsprings who have offsprings… until offsprings “wash out” with no genetic variation

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15
Q
Gregor Mendel
Genetic locus
Gene
Gene pool
Inbreeding coefficient
A

Gregor MENDEL: came up with theory of particulate inheritance through pea plants are bi-allelic (only 2 alleles are observable / important); used findings towards the genetic foundation of evolution

Genetic LOCUS: position on the chromosome

GENE: unit of heredity that is transferred from a parent to offspring and is held to determine some characteristic of the offspring; made of 2 alleles

Gene POOL: represents all the alleles at all loci in all individuals

INBREEDING coefficient: has negative correlation with verbal IQ due to the probability that a person with two identical genes received both genes from one ancestor → eg. incest

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16
Q

Rules of Probability

A

Rule of MULTIPLICATION: the probability that independent events A and B will occur simultaneously is the product of their individual probabilities

Rule of ADDITION: the probability that event A or event B will occur is equal to the probability of A plus the probability of B

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17
Q

Hardy-Weinberg principle

5 Population Assumptions

A

mathematical method to determine whether a species was evolving → p2 + 2pq + q2 = 1

Population assumptions: under these assumptions, allele frequencies in the gene pool will not change aka evolution isn’t happening

  1. No mutations
  2. Large (infinite) population
  3. Isolated (no gene flow)
  4. Random mating
  5. No natural selection
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18
Q

Microevolution Forces (5)

A

MODERN SYNTHESIS: aka neo-darwinism; articulated a new field of biology where you can identify the driver of the evolutionary process

MUTATION: random change in DNA

GENETIC DRIFT: drift to loss or fixation occurs faster and is more likely in smaller populations; occurs bc populations are not infinitely large → produces random changes in allele frequencies that may lead to a loss of genetic varation

  • Founder effect: higher incidence in population due to founding population having high frequency of the allele (lack of gene flow) → e.g. Amish of Lancaster County, PA where Ellis-van Creveld syndrome allele frequency is, PA vs. World: 0.07 vs 0.01
  • Bottleneck effect: large population shrinks to smaller population which leads to diversity loss → e.g. greater prairie chicken and northern elephant seal

GENE FLOW: the movement of genes among populations due to migration and interbreeding → e.g. copper tolerance in bent grass near a mine, where the wind carries copper-tolerant alleles to non copper-tolerant plants, resulting in the the spread of this tolerance as a result of reproduction (not adaptation)

NON-RANDOM MATING: can lead to changes in genotype frequencies

  • Assortative: individuals tend to mate with individuals that are phenotypically similar to them
  • Disassortative: individuals breed with individuals unlike themselves
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19
Q

Fitness
Directional selection
Stabilitizing selection
Disruptive selection

A

FITNESS: relative contribution an individual makes to the gene pool of the next generation; an individual’s ability to produce viable and fertile offspring; environmentally dependent

DIRECTIONAL selection: select away from original ideal towards one phenotype better adapted to the environment → i.e. dark mice living on dark lava flow

STABILIZING selection: individuals in the middle are most advantageous; select against extremes; actively maintains genetic diversity

DISRUPTIVE selection: select against intermediate phenotypes; extremes are favored while anything in between is no → Eg. seacracker birds with heavy/large bills exploit large seeds and birds with small/fine bills exploits small seeds BUT middle bills can’t exploit either

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20
Q

Normal Distribution
Bimodal distribution
Phenotypic variation

A

Normal distribution: aka Gaussian distribution; bell shaped curve

Bimodal distribution: two distinct peaks

Phenotypic variation : bimodal because gender based → eg, men are typically taller than women

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21
Q

Sickle-cell anemia (2)

“Good Genes” hypothesis

A

SICKLE-CELL ANEMIA: brought questions as to why diversity existed if “lesser” traits were destined to die out

  • Point mutation: changed the shape of blood cell due to incomplete dominance (aka heterozygous)
  • Heterozygote advantage: allowed for higher tolerance / immunity to malaria but can clog in bloodstream / lead to other health consequences

“GOOD GENES” hypothesis: questioned whether displays were allowing poor survival fitness genes to be passed OR display showcase both plumage and fitness

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22
Q
Frequency dependent selection
Sexual selection (3)
A

FREQUENCY DEPENDENT: common phenotype at a disadvantage; rare phenotype selected for → Eg. scale eating cichlid has individuals that are let and right mouthed; dominant population vs surviving populations shifts as prey fish adapt to react to the dominant population’s attack but not the (ultimately surviving) population

SEXUAL:

  1. Intrasexual selection: selection within the SAME sex;; typically accompanied by sexual dimorphism (difference in appearance) → eg. males compete among each other for access to females
  2. Intersexual selection: females choose mates due to limited offspring / energy to raise them, therefore more invested in who her partner will be; typically accompanied by epigamic traits (selected for by the opposite sex) → eg. paradise birds: males show themselves to females and have females choose; i.e. bird makes nest really pretty
  3. Anisogamy: sexual reproduction by the fusion of dissimilar gametes → eg. bowerbird female gamesters are larger in size than male gametes
23
Q

SPECIES CONCEPTS:
Morphological
Biological
Phylogenetic

A

MORPHOLOGICAL (MSC): characterizes a species by body shape and other structural features and is applied to asexual and sexual organisms → useful when information on gene flow is unknown

BIOLOGICAL (BSC): species as a population (or a group of populations) whose members have the potential to interbreed in nature and produce viable, fertile offspring (emphasis on reproductive isolating mechanism)

PHYLOGENETIC (PSC): apples phylogenetic systematics, cladistic analysis, and assessment of relationships of genealogy in order to determine what should be called a valid species based on evolutionary history

24
Q

Polymorphism
Phenotypic plasticity
Ring species
Hybrid zones (3)

A

POLYMORPHISM: many phenotypic variations between closely related organisms due to the presence of multiple alleles

PHENOTYPIC PLASTICITY: degree to which an organism’s phenotype changes depending upon its current or past environment

RING SPECIES: connected series of neighboring populations that can interbreed with relatively closely related populations but for which there exist at least two “end” populations (too distantly related to interbreed) → eg. Ensatina salamanders ring distribution formed due to heat

HYBRID ZONES: population with high gene flow - barrier forms, creating divergent patterns - might hybridize and interbreed → THREE OUTCOMES:

  1. Reinforcement: populations develop to divergently that hybridizing is no longer possible
  2. Fusion: merging of divergent populations into a single population
  3. Stability: existence of the divergent populations AND hybrid population concurrently
25
Q

Reproductive Isolation

  • Pro zygotic (5)
  • Post zygotic (3)
A

PREZYGOTIC mechanisms: locked in DNA before the zygote forms

  1. Habitat isolation: spatially separated
  2. Temporal isolation: different breeding times (eg. one species breeds in the spring; the other in the summer)
  3. Behavioral isolation: organisms can only recognize others of their species through a specific ritual → especially crucial in identifying potential mates
  4. Mechanical isolation: sexual organisms don’t “fit” together and physically cannot mate → eg. snails and their spirals
  5. Gametic isolation: not fusing at the gametic level even if copulation occurs

POSTZYGOTIC mechanisms: prevents the formation of fertile offspring

  1. Reduced hybrid viability: inability to form normal gametes during meiosis → eg. ensatina salamanders that live in the same region / whatnot may attempt to hybridize but the majority will fail
  2. Reduced hybrid fertility: inability to breed, therefore infertile or sterile; usually a result of cross species offspring → eg. mule as a result of crossing a horse and donkey
  3. Hybrid breakdown: aka hybrid lethality; some first generation hybrids may be fertile but subsequent generations eventually lose their fertility → eg. wasps
26
Q

Speciation / Cladogenesis

  • Allopatric
  • Sympatric (2)
A

SPECIATION: aka cladogenesis; refers to a lineage-splitting event that produces two or more separate species

ALLOPATRIC speciation: different species in different areas (“allo” meaning other)

SYMPATRIC speciation: different species in the same area

  • Role of microhabitat specificity → eg. fruit fly behavioral divergence
  • Polyploidy: containing more than two paired (homologous) chromosomes
27
Q

Node
SIster taxa
Polytomy
Common ancestor

A

NODE: connecting point denoting a common ancestor in phylogenics or cladograms

SISTER TAXA: two phylogenetic groups (clade or species) that are each other’s closest relatives

POLYTOMY: indication that more research is needed; relationships cannot be fully resolved to dichotomies, which results in odd looking cladograms

COMMON ANCESTOR: found at the nodes that connect two or more taxa

28
Q

Tetrapoda
Amniotes
Synapomorphy

A

TETRAPODA: four-footed animal, especially a member of a group that includes all vertebrates higher than fishes

AMNIOTES: typically refers to mammals, birds, reptiles → amniotic egg: embryo development occurs in this; common synapomorphy

SYNAPOMORPHY: indicated by hashes; characteristic present in an ancestral species and shared exclusively by its evolutionary descendants; can be morphological, molecular, behavioral, etc.

HOMOPLASY: characteristic present in a set of species but not in their common ancestor

29
Q

Paraphyly
Polyphyly
Monophyly

A

PARAphyly: includes an ancestor but not all descendants

POLYphyly: does not include the common ancestor of all members of the taxon

MONOphyly: refers to a clade; consists of a single ancestral species and its descendants

30
Q

Crown group

Stem group

A

CROWN: regarding extant taxa, their common ancestor, and all descendants from that common ancestor ; includes extinct taxa but not extinct taxa

STEM: very closely related to crown group but are not included; therefore considered t o be paraphyletic to the crown group

31
Q

Ingroup
Outgroup
Character matrix
Principle of parsimony

A

INgroup: specific division of taxa whose evolutionary relationship is being determined
OUTgroup: taxon chosen to help polarize the characteristics but similar enough to relate to ingroup, even if they don’t particularly belong in it

CHARACTER MATRIX: choose characteristics (present in taxon) you’re interested in studying and then score taxa based on whether the characteristics are present → allows for easier construction of cladograms

Principle of PARSIMONY: aka Occam’s Razor; simplest explanation that can explain the data is preferred; don’t make any more assumptions than necessary

32
Q

Paleontology
Taphonomy
Index fossils
Radiometric dating

A

PALEONTOLOGY: study of biological organization across deep time at all levels of organization

TAPHONOMY: “laws of burial”; process by which organisms are preserved via fossilization

INDEX FOSSILS: good for identifying where in time you are; useful for dating / correlating the strata in which it was found

RADIOMETRIC DATING: dependent on isotopes present (must decay into other isotopes) due to variants in neutrons

  • Parent and daughter isotopes
  • Half-life → eg. 14 C is 5.73 Ka
33
Q

Types of Fossil Preservation (6)

A
  1. INTACT OR BODY FOSSILS: preserving both flesh and bone; 3D with original material → eg. frozen tundra; amber
  2. COMPRESSION: usually of plants preserved in sedimentary rock via physical compression
  3. REPLACEMENT: external materials (eg. minerals) replace original material via diogenesis process → original morphology usually preserved
  4. MOLDS AND CASTS: original material no longer present but morphology still exists → negatives (eg. indents) and positives (eg. filled snail shells)
  5. TRACE FOSSILS (ichnofossils): typically made of footprints; indicative of migrant behavior, population, etc.
  6. LAGERSTATTE: cases of SPECTACULAR sedimentary preservation; might be the best ever → eg. full body squid even though squids are soft bodied and hard to preserve
34
Q

Milley-Urey experiment

Tetrapod origins

A

MILLEY-UREY experiment: helped convince scientists that living organisms came from inorganic compounds → answered the “how did life come from the void” question by creating amino acids (basic building blocks of life) from chemical composition of rocks

Tetrapod origins: biological superclass that t includes all living and extinct amphibians, reptiles, birds, and mammals → eg. Tiktaalik: aka fishapod; the transitional form from fish to amphibians

35
Q

Multicellular animals
Cambrian explosion (2)
Cambrian substrate revolution

A

MULTICELLULAR animals: multicellular complexity developed among the eukaryotes
Dichinisonia costata

CAMBRIAN EXPLOSION (542 Ma): lots of evolution as a result of the experimental explosion, most of which died off
- Burgess shale: fossil-bearing deposit exposed in the -
 Canadian Rockies of British Columbia, Canada; famous for the exceptional preservation of the soft parts of its fossils

CAMBRIAN SUBSTRATE REVOLUTION: priapulid worms burrow into the marine sediment, thereby introducing oxygen into a formerly anoxic sea floor → new potential for life!

36
Q

Exaptation

Tinkering

A

EXAPTATION: cooperation of an existing structure for use in a new functional context ; viable explanation for how complex evolutionary beings develop over time, leading to speciation within lineages → Pitcher plants, flytraps : adapted leaves VS Sundews: rely on modified trichomes to capture insects

TINKERING: rebuilding function from organs / abilities that were not evolved for a particular reason or were byproducts of evolution; lends to the creation of novelties → eg. Archopteryx: origin of flight in birds with different feathers for different purposes

37
Q

Tempo and mode of evolution (2)

A

PHYLETIC GRADUALISM: model of evolution which theorizes that most speciation is slow, uniform, and gradual; steady transformation of a whole species into a new one

PUNTUATED EQUILIBRIUM: morphological stasis interrupted by bursts of evolution
- Morphological Stasis: refers to the period of time in which a species accrues little to no morphological change → eg. dawn redwood trees; horseshoe crabs

38
Q

Levels of selection

“Evo-Devo” Biology

A

LEVELS OF SELECTION: ongoing debate about blank → species selection: consider that lineages are comparative to alleles thus creating macroevolutionary changes through different rates of replication and the extinction of lineages

EVOLUTIONARY DEVELOPMENTAL BIOLOGY: study of developmental biology to shed light on evolutionary dynamics

39
Q

Just-so stories
Lactation
Basal synapsids

A

JUST-SO stories: origin myths that explain a natural being or phenomenon; not testable in a scientific context + no evidence in the evolutionary record → eg. elephant got its long trunk through a crocodile pulling on it

LACTATION: delivers really high quality nutrition to offspring

BASAL SYNAPSIDS: on the evolutionary path to us! mammal-like reptiles named so by the fusion of their skulls (as opposed to diapsids with two holes in their head) ⇒ incorrectly named because they’re not reptiles OR mammals → eg. Dimetrodon (270 Ma): vertebral spines: rigid canals that carry blood into “fins” for temperature control (warming their blood via sun or evaporative cooling)

40
Q

Big 5 Mass Extinctions

K-Pg event (2)

A
  1. End of Ordovician (~444 Ma)
  2. Late Devonian (~375 Ma)
  3. End of Permian (~251 Ma)
  4. End of Triassic (~200 Ma)
  5. End of Cretaceous (~66 Ma)

K-PG EVENT (65.5 Ma): aka KT- extinction; end of Mesozoic era; contact zone between mesozoic / cenozoic era; extraterrestrial explanation as a simple / catastrophic explanation for the mass extinction

  1. Iridium later, Chicxulub crater: evidence found in the iridium layer (bc asteroids contain iridium) and dated to be around the time of extinction + found a crater!
  2. Nuclear winter: posited as a result of the asteroid landing; prolonged and worldwide cooling and darkening caused by sunlight-blocking smoke and soot entering the atmosphere
41
Q

Plate tectonics

  • Pangaea
  • Biogeography
A

Earth very dynamically shifting via plates located under continents; concept solidified in the 1950s

PANGAEA: megacontinent from which the continents were broken up from (225 Ma) → split into two continents (Laurasia as top; Gondwanaland as bottom) (200 Ma) → vicariance ??? → more splitting (specifically South America and Antarctica) (150 Ma) → splits again for India, Madagascar, more (85 Ma) → present day world (as in New World separated from Old World)

BIOGEOGRAPHY: correlation of fossils and geography based on pangeanic history, overlap of fossils, and fitting of continental edges

42
Q

Permo-triassic extinction

  • Possible mechanisms (3)
  • Formation of Pangaea
A

353 Ma — no single cause → lots of overlap and multiple hypotheses are valid

Possible mechanisms:

  1. Plate tectonics: sea-level change; increased aridity; habitat loss
  2. Volcanism: greenhouse effect, ocean anorexia, ozone depletion; increase in UV radiation
  3. Methane belch (?) : from sea floor; creates greenhouse gases that are more dangerous than CO2

Formation of Pangea increased competition during the adjustment to a new equilibrium + resulted in the loss of coastal habitat and different climates

43
Q

Out of Africa, Part 1

Homo sapiens

A

OUT OF AFRICA, Part 1 — 1.8 Ma → Dmanisi, Georgia: skulls of a species closer in relation to us than monkey but not exactly homo sapiens; heavy brow ridge, slight projecting of the lower facial profile (prognathism), larger brain than ancestral primate forms (still smaller than ours though)

HOMO SAPIENS — ~300 Ka → Jebel Irhoud, Morocco (North Africa): earliest (currently known) representation of anatomically modern humans; reduced (but still heavy) brow ridge, similar facial profile and dental configuration to us; strong evidence of tool making / usage of fire, dated through thermal luminescence (property of some materials to become luminescent in high temperatures after accumulating energy for a long period of time)

44
Q

Out of Africa, Part 2

Immigration into America (2)

A

OUT OF AFRICA, Part 2 — ~100 Ka: moved throughout Western Europe and Australia; ice glaciers blocked passage into the New World until 20 Ka

IMMIGRATION INTO AMERICAS — ~14.5 Ka:

  • Beringian land bridge: allowed for passage into the Americas during the warm season; nomadic homo sapiens likely followed food
  • Mastodon kill site in Florida: aka Page-Ladson site; underwater archaeological site with great preservation of stone tools and Mastodon (relatives of elephants) bones
45
Q

Late Pleistocene Extinctions (2)

Are we in a 6th Mass Extinction ??

A

LATE PLEISTOCENE EXTINCTIONS:

  • Richard Owen was the first to suggest that ancient megafauna may have been driven to extinction by the “agency of man” through his studies of the extinct Moa birds of New Zealand and large invertebrates of Australia
  • Megafauna: extinction correlated in time with the arrival of humans → CAUSAL RELATIONSHIP since larger animals were in direct competition with humans for resources and had longer reproductive cycle (with low numbers of offspring per cycle)

MASS EXTINCTION #6 ? : striking similarities between past mass extinctions and extinctions of today with an overall reduction in faunal body size; high rate of species loss per unit of time as compared to background extinction rates of the fossil record (measurable although difficult)

46
Q

Anthropocene (2)

  • Plastiglomerates
  • CO2 Anomaly
A

defined as the period during which human activity has been the dominant influence on climate and environment → start of which indicated by two hypothesis, as follows

PLASTIGLOMERATES: acted as marker / deposit for the start of Anthropocene; new kinds of rocks on Hawaii where debris plastics are deposited on beaches, mixed with sands / shells / rocks, and then heated over time (eg. through bonfires) to create plastic conglomerates with natural materials

CO2 ANOMALY (c. 1610 CE): “discovery” of the Americas and the subsequent population decimation (as a result of warfare and disease) allowed flora to grow and therefore absorb more CO2, leading to a global change in altered carbon isotope budgets → change in atmospheric chemistry related to the sequestration of CO2 by plants

47
Q

Archaea
Bacteria (3)
Origin of Eukaryotes

A

ARCHAEA: aka extremophile; organisms that can survive in extreme conditions via biological / chemical changes in their composition

BACTERIA:

  • Stromatolites within biofilms (communities that grow up and up)
  • Cyanobacteria: photosynthesize and produce oxygen by taking in CO2; helped create an oxygenated atmosphere
  • Oxygen revolution (2.7 Ga): became a toxic environment for anaerobic organisms; helped promote life for aerobic organisms → creation of ozone layer in the atmosphere + iron bands in ocean (iron oxide rust on sedimentary rock is evidence of oxygenic photosynthesis by cyanobacteria)

Origin of EUKARYOTES (2.1 Ga): includes humans; very hard to preserve microorganisms; evolved from prokaryotic ancestry
- Endosymbiosis: idea solidified by Lynn Margulis; some eukaryotes took prokaryotes into their own cells via serial endosymbiosis → eg. evolution of the heterotrophic eukaryote that eats the food from other things

48
Q

DNA-DNA Hybridization

Genetic sequencing

A

DNA DNA HYBRIDIZATION: historical study where single strands of DNA taken from each of 2 species then hybridize their DNA strands into a new double helix, then apply heat to separate the newly made strands; the more heat (energy) needed to separate the two strands, the stronger the DNA bonds (the closer the two species are to each other)

GENETIC SEQUENCING: modern study concerning DNA alignment (process of sequencing each base pair and determining structure)

49
Q

Phylogenomics
Phylogram
Extant phylogenetic bracket

A

PHYLOGENOMICS: refers to the study of whole genomes; study individual genomes in animals that are indicative of certain characters + deletion of certain genomes indicate something happened within the lineage (practiced in lab)

PHYLOGRAM: different from cladogram since branch lengths are indicative of distance/relationship genetically or recency of evolutionary split

EXTANT PHYLOGENETIC BRACKET: behavioral information (crocodiles vs. birds raising youngs on nests)

50
Q

Rafflesia
Hyrax
Mapping characters on tree stick insects (2)
Parental care and nest brooding

A

RAFFLESIA: molecular analysis of floral gigantism

HYRAX: little thing that looks like a rat; elephants are closely related to it?? → Unresolved polytomy: we don’t know if they’re closer to manatee or elephant

MAPPING CHARACTERS on tree stick insects

  • Bats: most derived clades of bats are Central and South American
  • Body lice: connecting between when they evolved and when humans started wearing clothes

PARENTAL CARE AND NEST BROODING: Oviraptor fossil showing parental behavior (guarding young in nest) passing on to current animals like birds and crocodiles

51
Q

Adaptive radiation

  • Hawaiin Archipelago (2)
  • African Great Lakes (4)
A

period of relatively rapid speciation that coincides with the evolution of beneficial phenotypes → as opposed to EVOLUTIONARY radiation (explosive evolution / diversification of a group of organisms into forms filling different ecological niche)

HAWAIIN ARCHIPELAGO:

  • Silversword alliance: California tarweed landed in Hawaiian Archipelago and radiated there, creating different niches of plants
  • Hawaiian Drosophila: fruit fly, changes in where they oviposit

AFRICAN GREAT LAKES:

  • Cichlid species flocks: group of organisms that underwent a lot of cladogenesis
  • Lake Malawi and Lake _____ has 500 species of cichlids each, convergent evolution
  • Community structure
  • Ecomorphology: combining study of form and function the form is in (the ecology)
52
Q

Trophic (feeding) guild (2)

Coevolution

A

TROPHIC (FEEDING) GUILD:

  • Sympatric carnivores of Israel
  • Community assembly: structure prey-predator relationships developing in close geographical places

Coevolution: direct adaptations by one organism in response to the adaptations of another organism → e.g. Darwin’s Orchid and Morgan’s Sphinx

53
Q

Batesian vs Mullerian Mimicry
Aposematism
Biological arms race (2)

A

BATESIAN vs MULLERIAN MIMICRY:

  • Bates: A harmless species looks like a dangerous (distasteful) one
  • Muller: A harmful (distasteful) species looks like a harmful (distasteful) one

APOSEMATISM: aka unken reflex; animal exposes a colorful part of themselves and shows that they’re dangerous → e.g. newt

BIOLOGICAL ARMS RACE:

  • Newt, garter snake: tetrodotoxin (poison) in newts but the snakes eat them, newts just keep getting more poisonous and snakes keep adapt
  • Yellow-eyed Ensatina: mimics local highly toxic newts; Batesian mimicry