Uniparental Inheritance Flashcards

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1
Q

What is Uniparental Inheritance?

A

Uniparental Inheritance:
- A non-Mendelian form of inheritance that consists of the transmission of genotypes from ONE parental type to all progeny
(inheritance matters based on what you get from one parent (not from other) )

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2
Q

what is an example of parental inheritance ?

A

The Y chromosme can be an example of parental inheritance
-anything that a child inherits on Y chromosome will come from father.
(only affects sons, NOT daughters)

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3
Q

Compare and Contrast the Y chromosome to X chromosome

A

-The X and Y chromosomes pair during meiosis
-The X is much LARGER and carries MANY types of genes
-The Y chromosome is SMALL and has LESS than 100 genes
-Most Y genes control sex determination or Spermatogenesis (production of sperm)

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4
Q

Explain how Y-linked traits are passed down to children. Include What each child receives from Father

A

-Each son receives his Y from his father
-Each daughter receives an X from her father
-Thus, the Y chromosome is passed in an UNBROKEN chain father to son
Y-linked traits should be passed to ALL SONS and NO Daughters

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5
Q

What is an example of a rare Y-linked mutation that is passed on to children?

A

HEARING IMPAIRMENT (Y-linked mutation that causes hearing impairment)
-affected males pass on trait to all sons, Not to daughters

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6
Q

Explain the major Y genes that are required for male production. What happens when there is a mutation in one of these genes?

A

The major Y genes required for male reproduction;
-*The SRY gene (initiates Male DEVELOPMENT
(SRY: Sex determining region Y gene; aka TDF gene (test determining factor) )
-mutations in the SRY cause XY individuals to develop as females
-These SRY females have DEFECTIVE Gonads
-**Many genes in the AZF region control Spermatogenesis
-most mutations in these Y genes cause STERILITY

(SRY gene is reason why males are identified. mutation in this gene prevents Y from becoming male, and ends upping female. SRY mutant females do NOT reproduce; ovaries are messed up)

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7
Q

Further explain how SRY gene controls male development. Include examples and discuss method used to determine if there is a mutation in gene

A

The SRY gene controls male development
- A family with two daughters who are each XY^SRY
- Southern Blots were probed with DNA that binds the SRY gene
-No band NO Y
-Three band= NORMAL SRY
-Two bands= MUTANT SRY
The father must have had a SRY mutation in his testes
(this is a very rare case, where Dad is normal phenotype, but has mutations in Y gene that changed Y to decreased gene and passed on to children. End up having 1 normal daughters, two daughters with mutant alleles in SRY gene, and 1 normal son; germline mutation)

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8
Q

What are germline mutations?

A

Germline mutations: new mutations or changes in DNA that you inherit from sperm and egg during conception)
(parents are not affected, but children are from new mutation)

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9
Q

What kind of mutations are cause Y chromosome defects?

A

Y chromosome defects are almost always SPONTANEOUS MUTATIONS
The Y chromosome has FEWER genes than the X
-Most Y-linked genes are required for Fertility.
-Sex-determination genes like SRY
-Spermatogenesis genes
**Thus, most Y mutations are NOT passed on to future generations

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10
Q

What is Sex-specific imprinting? What genetic disorders are examples of this?

A

Sex-specific chromosome imprinting: epigenetic process that marks chromosome (hence only one copy of gene is expressed; whether father or mother, while the other gene is suppressed)
2 genetic disorders that use this imprinting:
-Angelman Syndrome
-Prader-Willi syndrome

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11
Q

What is Angolan Syndrome and what are its symptoms?

A

Angelman Syndrome: genetic disorder causing developmental disabilities.
Symptoms:
-Small head
-Intellectual disability
-Developmental disability
-Problems with speech, balance, movement, seizures, and sleep.
-Affected children are usually happy (mood happy) and interested in WATER

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12
Q

What are the clinical features of Prader-Willi Syndrome ?

A

Prader Wili-Syndrome:
-Weak muscles
-Slow development
-Constant hunger:
-Severe obesity
-Type 2 diabetes
-Short with small hands and feet and narrow forehead

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13
Q

What do Angelman Syndrome and Prader-willi syndrome have in common ? How are they differen

A

The same mutation causes both Angelman Syndrome and Prader-Willi syndrome
(they are both caused by same deletion of same part of chromomse)
- The SAME mutation deletion can cause both disorders
- In most cases, these very Different diseases are caused by a DELETION of the same part of chromosome 15.
-***The key difference is whether the maternal or paternal chromosome is affected.

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14
Q

Describe how maternal and paternal chromosomes are normally treated vs in rare cases.

A

To form offspring, you need sperm and egg to fuse together, and mother and father will each carry single copy of each chromosome and have child diploid for each chromosome
- In rare ceases, these chromosomes are treated differently

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15
Q

What are parts of the chromosomes are IMPRINTED in the egg or sperm?

A

Some parts of chromosomes are Imprinted in egg or sperm:
**The PWS region is marked for inactivation in the mother’s egg
-So in the child, only the Paternal copy is used.
-if the paternal copy is missing, the Child develops PRADER-WILLI SYNDROME
The AS region is marked for inactivation in the Father’s sperm
-
so in the child, only the Maternal copy is used
- If the maternal copy is missing, the child develops ANGELMAN SYNDROME

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16
Q

Explain the molecular view of what causes Prader-Willi syndrome

A

Molecular view of the Prader-Willi cause
- if the father’s PWS-AS region is DELETED, a child Only expresses the mother’s AS gene
-The maternal PWS region is inactivated, resulting in Prader-Willi syndrome

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17
Q

Discuss the molecular view of what causes Angelman syndrome?

A

The molecular View of Angelman syndrome:
-If the mother’s PWS-AS region is DELETED, a child Only expresses the father’s PWS gene
-The paternal AS region is inactivated, resulting in Angelman syndrome.

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18
Q

How does Chromosome imprinting affect the genome? What are examples of imprinting that occur?

A

Chromosome imprinting:
-Parental imprinting affects only a SMALL part of the human genome
-The Prader-Willi and Angelman region was the first case described where it occurs
-In imprinting, regions of DNA are marked so they will remain turned off:
-Some marks involve DNA methylation
-Some marks change the histones that package DNA

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19
Q

How does DNA from nucleosomes?

A

DNA wraps around histone octamers to form nucleosomes
many types of histone marks can regulate DNA
(can affect whether DNA is likely or not likely to be used; and describe how DNA is used)

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20
Q

What are other examples of imprinting?

A

Othere examples of Imprinting:
-Beckwith-Wiedemann syndrome
-The DIRAS3 gene on chromosome 1
- Silver Russel Syndrome;
-half of cases have too little methylation of the H19 and IGF2 genes
-Rare form of dwarfism
-can be treated by diet and growth hormones

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21
Q

What is mitochondria? Describe the structure.

A

Small membranous cells that generate the energy needed to survive
2 sets of membrane:
outer membrane and inner membrane (electron transport chemistry occurs here)
They also have a matrix with ribosomes and chromosomes (suggesting they have DNA)

22
Q

What is the role of Mitochondria?

A

Mitochondria controls Oxidative Phosphorylation (process of obtaining energy)
(through chromosomes that encode proteins to control oxidative phosphorylation)

23
Q

What are the traits that bacteria shares with Mitochondria ? What part of the mitochondria resembles bacteria?

A

Mitochondria shares many traits with bacteria:
-Mitochondria and bacteria BOTH have CIRCULAR genomes
-Mitochondrial and bacterial genes Both LACK INTRONS
-Mitochondria and bacteria both have 70s ribosomes.
-Mitochondria and bacteria both Reproduce by FISSION
-The inner mitochondrial membrane resembles bacterial membranes

24
Q

Explain what occurs in the Endosymbiotic Theory?

A

The Endosymbiotic theory (by Lynn Margulis)
-Theory: the ancestor of all eukaryotic cells incorporated a bacteria that was good at managing O2 (used it for energy)
-In stead of degrading bacteria, the eukaryotes used bacteria as Symbiont (use the energy bacteria produces in a useful, chemical form)
Plants also incorporated separate organelle, chloroplasts that descended from bacteria (have circular chromosome) allows them to do photosynthesis
(bacteria are very good at certain kinds of chemistry, useful for life on earth)

all animals, plant, fungi bodies have adopted O2 utilizing powers of one bacteria; plants adopted bacterial ability to do photosynthesis (by engulfing and taking up bacteria)

25
Q

What occurs in the evolution of Eukaryotic symbionts?

A

Evolutionof Eukaroyitc symbionts lead us to learn that within our cell, we have organelles that have their own DNA
(DNA that they inherit and reproduce)

26
Q

How does human mitochondrial genome compare to bacterial genomes? How many tRNA are genome?

A

The human mitochondrial genome is SMALLER than bacterial genomes
-22 tRNA-encoding genes
-13 protein-encoding regions
(most things occur in mitochondria, controlled by normal Mendalian genetics

27
Q

What happened to mitochondrial genes in evolution?

A

Many mitochondrial genes moved to the nucleus during evolution
Electron transport pathway: different complexes involved moving energetic electrons through, to gain energy to release ATP
small number of things made in mitochondria; large number made by single gene making mRNA, making a protein in cytoplasm

(Some proteins made from mitochondrial genes to work on mitochondria and keep use live)

28
Q

What are effects of the. Mitochondrial inheritance? Where is sperm mitochondria located?

A

Mitochondrial inheritance affects energy production
(mitochondria have their own DNA; they are NOT passed on from FATHER) Mitochondria
-Sperm mitochondria are located in the MIDPIECE of the sperm structure
(between head and tail)
Sperm do have mitochondria, but need the energy from the mitochondria to move and find the egg.

29
Q

Explain what occurs in fertilization with sperm mitochondria and egg

A

Initially, Sperm mitochondria enters the egg at fertilization
The sperm mitochondria are then degraded in egg
-mammalian sperm mitochondria are marked with Ubiquitin
-After fertilization they are recognized and destroyed, leaving only oocyte mitochondria
(Both egg and sperm all start out with mitochondria, but everyone ends up inheriting mitochondria from mm)

30
Q

What is the basic mitochondrial inheritance pattern pedigree ?

A

basic mitochondrial inheritance pattern:
-A trait is passed down from a mother to ALL of her children
(father will not pass down trait to children)
**mitochondrial inheritance is the REVERSE form of Uniparetnal inheritance from Y chromosome **

31
Q

How many mitochondria do mature oocytes and primordial germ cells have?

A

-Cells have thousands of mitochondria
The mature oocyte has about 500,000
-But all of these mitochondria are descended from LESS than 200 in a primordial germ cell.
(primordial germ cells have a few mitochondria).
**Primordial cells have 10-200 in mtDNA copy numbers and is the Mitochondrial genetic BOTTLENECK
(primordial germ cells; early germ cells that give rise to all eggs if one is females or sperm if males, have few mitochondria)

32
Q

What does a regular mitochondrial inheritance pedigree look like?

A

Regular Mitochondrial inheritance pedigree; can involve incomplete penetrance
defective mother; her children will be affected to varying degrees (1 could look so normal, but still have defective gene; another child could be severely affected, even higher than mother.
The daughters can pass this on to children at higher or lower levels.
But the sons can never pass it on.

33
Q

How are defective mitochodria arranged? What are ways for how you can get mix of defective/normal mitochondria

A

Defective Mitochondria are RANDOMLY assorted into oocytes
some eggs will get a lot of normal mitochondria (small amount of defective mitochondria), other cells will get a lot of defective mitochondria
(hence variability of eggs of children)
Formation of oocytes in nucleus are controlled by law of Meiosis and Medellin segregation to equally do one of two copies of each chromosome

mitochondrial pedigree: in practice, mix of good and defective mitochondria.
You could get mutation on mitochondrial genome (unhealthy mitochondria) and also get genes in nucleus (which control Mendel laws; control mitochondria uses) that can be inherited from mom or dad

34
Q

What are symptoms of mitochondrial cytopathies?

A

common mitochondrial disease have complicated symptoms; They involve parts of the body that use high amounts of energy such as Nervous System, muscular system and endocrine system
-These mitochondrial diseases affect the ability of our cell to produce energy (Tissue like nerve and muscle are especially affected)

35
Q

What is Leber’s Hereditary Optic Neuropathy (LHON) ? What kind of disorder is this?

A

Leber’s Hereditary Optic Neuropathy
-also known as LHON
-Onset is usually in the 20s or 30s (age)
-For UNKNOWN reasons, the disorder predominantly affects the EYE
-Caused by mutations in the mitochondrial genes for NADH Dehydrogenase (Complex I; starts ETC)
**Shows a typical mitochondrial Inheritance pattern
LHON is the most characteristic of mitochondrial inheritance, but hardest to understand.

36
Q

How does LHON (Leber’s Hereditary Optic Neuropathy) affect eye?

A

In patient with LHON, there is damage to optic nerve
-ex: in left eye, visible retinal damage is seen in affected patient

37
Q

What amount of the Europeans carry a mutation that causes LHON? How is LHON treated ?

A

LHON can be treated with drugs that help the electron transport chain
-About 1/40000 (rare) Europeans carries a mutation in mitochondria that could cause LHON
-Many people with the mutation never develop visual problems
-IDEBENONE can help further prevent further vision loss
-However, drug treatment CANNOT restore lost vision

38
Q

What is Mitochondrial Encephalomyopathy, Lactic acidosis and stroke-like episodes (MELAS) ? what are the clinical features and what mutation is seen in majority of the cases?

A

Mitochondrial Encephalomyopathy, lactic acidosis and stroke-like episodes
-also known as MELAS
-Usually starts as a Degenerative process in childhood
-Affects much of the body, particularly the nerves and muscles (since they use energy at high levels)
-Key symptoms included elevated Lactic acid levels in blood, and enlarged mitochondria in muscle
-mutations in the mitochondrial tRNA ^leu (problem with leucine being place on gene) causes 80% of the cases
Show a typical mitochondrial inheritance pattern

39
Q

What is observed in the mitochondria of an affected patient with MELAS?

A

Enlarged mitochondria with Thickened christate muscle (due to defective mitochodinral function) of an 11-year old body with MELAS
-Electron Micrograph (courtesy of Dr. R. Saneto)

40
Q

Explain what Myoclinic Epilepsy with ragged-red fibers (MERRF) is and the symptoms involved. Which mutations causes this disease?

A

Myocloinc epilepsy with ragged-red fibers
-also called MERRF
-The disorder causes progressive myoclonic epilepsy
-Symptoms include uncontrolled muscle contractions, dementia, ataxia and myopathy
-The ragged-red fibers of muscle indicate proliferation of Defective mitochondria
-Usually caused by a mutation in the mitochondrial tRNA^lys or tRNA^his genes
**Shows a typical Mitochondrial Inheritance pattern **
MERRF is similar to MELAS (share symptoms, mitochondrial inheritance)
(NO CURE for disease)

(can see clumps of diseased mitochondrial stained red with Gomori trichrome stain)

41
Q

Explain how the cells are changing in patients with MERRF

A

Defective muscle fibers in a MERRF patient have DYING CELLS
-COX staining (brown) shows areas with active mitochondria
-Hoechst 33258 staining shows nuclei
-TUNEL staining (black) shows dead cells

42
Q

What is Kearns-Sayre Syndrome? What kind of disorder is it and what are its clinical features?

A

Kearns-Sayre syndrome
-Onset during mid to late childhood
-The disorder is progressive
-Symptoms include ophthalmoplegia (right), ptosis (not able to control eyelids), atypical rentinitis pigmentosa, ragged-red fiber myopathy, ataxia, deafness and cardiomyopathy.
-usually caused by a large DELETION in the mitochondrial genome
**Usually shows SPORADIC inheritance pattern (Spontaneous, New Mutation ) , but other patterns have been observed too.
(ex:family; where no mutation occurs, but daughter randomly has mutation)

43
Q

What is Chronic progressive Opthalmoplegia? What are its clinical features?

A

Chronic Progressive External Opthalmoplegia;
-also called CPEO.
-symptoms include opthalmoplegia, ptosis (drooping of the eye) (right), atypical retinitis pigmentosa, ragged-red fiber myopathy, ataxia, deafness and cardiomyopathy (nerve/muscle problems)

44
Q

What are the different causes of Chronic Progressive Opthalmoplegia?

A

Chronic Progressive Opthalmoplegia:
-sometimes caused by ** Maternally inherited mitochondrial deletions (inherited from mother) **
-Also can be caused by **autosomal Dominant mutations in Twinkle (a helicase), which leads to mitochondrial deletions (dad can pass this down to children)
-Also can be caused by Autosomal Dominant mutations in ANT1 (adenine nucleotide transporter 1)** (ANT1 helps get ATP out)
-Also can be caused by **
Dominant or recessive mutations in POLG1 (a mitochondrial DNA polymerase)

45
Q

What are the advantages of using mitochondrial DNA reconstruct evolution?

A

Advantages of using mitochondrial DNA to reconstruct evolution:
(simple mother to daughter inheritance)
-Mitochondrial DNA changes relatively quickly, so it can be used to reconstruct Recent evolution
-Mitochondrial DNA is ONLY inherited from one parent, so we don’t need to worry about genetic recombination
-Mitochondrial DNA is SMALL And Easy to Isolate and sequence
-Many of these advantages also apply to the Y (Y chromosome; also used study human inheritance pedigree)

46
Q

What do mitochondiral and y-chromosome DNAs reveal?

A

Mitochondrial and Y-chromosomes DNAs reveal the path of human migrations
modern humans evolved in Africa (hence Africa is very diverse)

Migration: move from Africa–> Middle East–> Europe–> Asia–> Australia–> North America and South America

47
Q

Explain why mitochondrial phylogenies miss some details of evolution

A

Mitochondrial phylogenies miss some details of evolution
-Because mitochondrial DNA is only inherited from mothers, we can lose details from evolution
-All people could share mtDNA (mitochondrial DNA) from one recent woman, But NOT have inherited all nuclear DNA from her.

(ex: children only inherit mtDNA from one-great grandparent (mother’s mother’s mother; hence lose some evolution)

48
Q

What is another important use of Y chromosome? Provide an example of this.

A

Y chromosomes sequences can be used to Track cultural history
-The majority of Jewish Kohanim (PRIESTS) share an ancient Y chromosome pattern

49
Q

What population in the world are descendants of Genghis Khan?

A

Almost 1/200 men in the world are Descendants of Genghis Khan (number is higher in Asia).

(due to conquerors from mongol empire founded by Khan)

50
Q

Where is the Y chromosome inherited from? why is the important?

A

The Y is Only inherited from the FATHER
-it contains genes needed for male reproduction

51
Q

Where is the mitochondrial genome inherited from? Why is it important ?

A

The Mitochondrial genome is Only inherited from the Mother
-It contains genes needed for the Electron transport chain and energy production
-Each cell has many mitochondria and only some of them are defective in people with disorders

52
Q

What genetic disorders show a typical mitochondrial inheritance pattern?

A

Genetic diseases that have typical mitochondrial inheritance pattern:
-LHON (Leber’s Hereditary Optic Neuropathy)
-MELAS (mitochondrial Encephalomyopathy, lactic acidosis, and stroke-like episodes)
-MERRF
-Chronic Progressive external ophthalmoplegia (CPEO)