Topic 8 - The Control Of Gene Expression Flashcards

1
Q

Gene mutation

A
  • Change in DNA base sequence of a gene
  • mainly occurs in DNA replication
  • occur spontaneously, but frequency is increased by exposure to mutagenic agents
  • can result in different amino acid sequence in primary structure - causes hydrogen and ionic binds to from in different locations - results in different tertiary structure and therefore different 3D shape - different shape results in different function or non-functioning protein
  • alterations to genes can result in a mutation that causes cancer
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2
Q

6 types of Gene mutation

A
  1. Addition
  2. Deletion
  3. Substitution
  4. Inversion
  5. Duplication
  6. Translocation of bases
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3
Q

Addition Mutation

A
  • One extra base is added to sequence
    Original - TAC TTC AGG TGG
    Mutation - TAC ATT CAG GTG G
  • all subsequent codons are altered (frame shift) - all altered codes could potentially code for different amino acids and result in very different sequence if amino acids resulting in a non-functioning protein
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4
Q

Deletion Mutation

A
  • deletion of a base in a sequence
    Original - TAC TTC AGG TGG
    Mutation - TAC TCA GGT GG
  • Causes frame shift to the left - could result in different polypeptide chain and a non-functioning protein
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5
Q

Substitution mutation

A
  • one base changed for different base
    Original - TAC TTC AGG TGG
    Mutation - TAC ATC AGG TGG
  • results in only one codon changing and due to genetic code being degenerate it may still code for same amino acids and result and therefore have no impact. If mutation is in the introns it would also have not changed the amino acids coded for
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6
Q

Inversion Mutation

A
  • section of bases detach from DNA sequence, but when they rejoin they are inverted, so section of code is back to front. Results in different amino acids being coded for in this region
    Original - TAC TTC AGG TGG
    Mutation - TAC GGA CTT TGG
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7
Q

Duplication mutation

A

One particular base duplicated at least once in the sequence. Causes frame shift to the right and a different sequence of amino acids are coded for
Original - TAC TTC AGG TGG
Mutation - TAC TTT TCA GGT GG (2 duplications)

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8
Q

Translocation of bases

A

Section of bases on one chromosome detaches and attaches to different chromosome
Substantial alteration and can cause significant impacts on gene expression and therefore resulting phenotype

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9
Q

Stem cells

A
  • multicellular organisms have a diverse range of specialised cells that all originate as undifferentiated stem cells
  • stem cell are undifferentiated cells that can continually divide and become specialised
  • differentiation is process by which stem cells become specialised
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10
Q

Types of Stem cells

A

Each type of stem cell have different differentiation abilities.
- totipotent
- pluripotent
- multipotent
- unipotent

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11
Q

Totipotent stem cells

A

Can divide and produce any type of body cell
Totipotent cells occur only for a limited time in early mammalian embryos

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12
Q

Pluripotent stem cells

A
  • found in embryos
  • an divide into unlimited numbers
  • used in treating human disorders
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13
Q

Multipotent stem cells

A
  • found in mature mammals
  • can divide to form a limited number of different cell types
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14
Q

Unipotent stem cells

A
  • found in mature mammals
  • can divide to form a limited number of different cell types
  • used to make cardiomyocytes
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15
Q

Induced Pluripotent Stem cells (iPS cells)

A
  • produced from adult somatic cells using appropriate protein transcription factors to overcome some of the ethical issues with using embryonic stem cells
  • to do this, genes that were switched off to make cell specialised must be switched back on. This is done using transcriptional factors
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16
Q

Control of Transcription

A
  • In eukaryotes, transcription if target genes can be stimulated or inhibited when specific transcriptional factors move from cytoplasm into the nucleus
  • this can turn on/off genes so only certain proteins are produced in a particular cell
  • turning on/off particular genes in a cell is what enables them to become specialised
17
Q

Transcription Factors

A
  • Transcription of a gene will only occur when a molecule from cytoplasm enters the nucleus and binds to the DNA in the nucleus
  • these molecules are proteins called transcription factors - each one can bind to different base sequences on DNA, and therefore initiate transcription of genes
  • once bound transcription begins creating mRNA molecule for that gene which can be translated in cytoplasm to create the protein
  • without binding of transcription factor, the gene is inactive and protein won’t be made
18
Q

Oestrogen

A
  • Steroid hormone that can initiate transcription - binds to receptor site on transcriptional factors
  • when it binds to transcriptional factor is causes it to change shape slightly - makes it complementary and able to bind to the DNA to initiate transcription
19
Q

Control of Gene Expression

A

In eukaryotic organisms, another way gene expression (protein synthesis) is controlled is by epigenetics

20
Q

Epigenetics

A
  • Heritable change in gene function, without changing the DNA base sequence
  • these changes are caused by changes in the environment and can inhibit transcription
21
Q

Methylation of DNA

A
  • increased methylation of DNA inhibits transcription
  • when methyl groups are added to DNA, they attach to the cytosine base - prevents transcriptional factors from binding and attracts proteins that condense the DNA-histone complex. In this way, methylation prevents a section of DNA from being transcribed
22
Q

Acetylation of Histone Proteins

A
  • decreased acetylation of associated histones proteins on DNA inhibits transcription
  • if Acetyl groups are removed from DNA then histones become more positive and are attracted to the phosphate group on DNA - this makes DNA and histones more strongly associated and hard for the transcription factors to bind
23
Q

RNA interference (RNAi)

A
  • In eukaryotes and some prokaryotes, translation of mRNA produced from target genes can can inhibit led by RNAi
  • this is when an mRNA that has already been transcribed gets destroyed before it is translated to create a polypeptide chain
  • small interfering RNA (siRNA)
24
Q

Small interfering RNA (siRNA)

A
  • an enzyme can cut the mRNA into siRNA
  • One strand of the siRNA then combines with another enzyme
  • this siRNA-enzyme complex will behind via complementary base pairing to another mRNA molecule
  • once bound, the enzyme will cut up the mRNA so it cannot be translated
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