Topic 4 Flashcards

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1
Q

What does biodiversity mean?

A

Biodiversity is the variety of living organisms in an area which takes into account species diversity and genetic diversity.

Species diversity is the amount of different species in one area

Genetic diversity is the variation of alleles in a species

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2
Q

What does endemism mean?

A

Endemism describes a species that lives exclusively in one area and cannot be found anywhere else

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3
Q

How has human activity decreased biodiversity?

A

As humans have expanded into different areas of wildlife we have taken resources like:

  • Space
  • Food
  • Air quality

This then results in the extinction rate accelerating because of human activity

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4
Q

How do you measure genetic diversity?

A

To measure genetic diversity you can use heterozygosity index where a higher proportion of heterozygotes means greater genetic diversity

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5
Q

How would you use the heterozygosity index?

A
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6
Q

What is a niche?

A

An ecological niche is the way an organism exploits its environment and the role it has in its community.

If two organisms fill two different niches then they aren’t in competition with each other

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7
Q

What is co adaptation?

A

Like the orchid bee and the brazil nut the plant and the insects evolve and adapt in tandem with each other. Where the two becomes more adapted and depended on each other

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8
Q

What types of adaptations are there?

A
  • Behavioural
  • Physiological
  • Anatomical adaptations
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9
Q

What are behavioural adaptations

A

Actions by an organism that help it survive and reproduce in response to their environment

  • Sunflowers will turn their leaves towards he sun for better photosynthesis.
  • Possums will play dead if they are threatened by a predator
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10
Q

What are physiolgical adaptations

A

Processes inside an organism that help them survive and reproduce

  • Brown bears hibernate which lowers metabolism and conserves energy
  • Some bacteria produce antibodies to kill other species of bacteria in the area
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11
Q

What are anatomical adaptations?

A

The external structural features of an organisms body increasing their chance of survival

  • Otters streamline shape making it easier to glide through water allowing them to catch prey and escape predators
  • Whales have a thick layer of blubber helping maintain optimal body temps
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12
Q

What does the term evolution mean?

A

Evolution is the change in allele frequency in a population over time and generations.

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13
Q

What is the process of natural selection?

A
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14
Q

What is allele frequency?

A
  • Allele Frequency is the number of organisms in a species that possess a specific allele.
  • Over time as a species evolves and new alleles are introduced through genetic mutations Allele Frequency will change
  • The frequency is always less than 1
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15
Q

What is the Hardy Weinberg equation based off?

A

The Hardy-Weinberg equation Is based off the principle

Allele frequency will not change from one generation to the next

(This is only true when you assume that the population is has:

  • A large population
  • No immigration
  • Random Mating
  • No mutations
  • No natural selection

Along with random mating so that all the genotypes are mixed with each other)

The Hardy-Weinberg equations are used to estimate frequency of alleles, genotypes, and phenotypes

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16
Q

What is the equation for predicting genotype and phenotype frequency?

A

Equation for frequency of one genotype if you know the frequency of the other genotypes

$p2 + 2pq + q2 = 1$

p2 = the frequency of the homozygous dominant genotype

2pq = frequency of the heterozygous genotype

q2 = the frequency of homozygous recessive genotype

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17
Q

What is reproductive isolation?

A

Reproductive isolation - a collection of mechanisms, behaviors, and physiological processes that prevent two different species reproducing with each other

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18
Q

How can reproductive isolation lead to different genetic variation?

A
  1. Geographical isolation (floods , volcanic eruptions, etc) will split isolate two groups of the same species
  2. If the conditions within the two groups like different climates
  3. These environments would mean different alleles would be prominent due to natural selection
  4. Eventually the two groups would become genetically distinct over time to the point where the two new variations would not be able to produce fertile offspring
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19
Q

How can these different genetic variations lead to new species

A

Changes in alleles can prevent individuals from breeding successfully because of:

  • Seasonal changes – different flowering times or mating seasons
  • Changes in shape of genitalia
  • Changes in behaviour – different courtship rituals
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20
Q

What does the term classification mean?

A

Classification is the way you organise organisms into specific groups based on relationships between phenotypes and genotypes.

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21
Q

What is the incentive to classify?

A

By classifying organisms into groups we can see evolutionary relationships to:

  • Find new sources for chemicals
  • To use in commercial use like medicines
  • Like finding less toxic chemicals form a chestnut tree from a sister species
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22
Q

What are the basic taxonomic groups?

A
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23
Q

What is molecular phylogeny?

A

Where organisms genetics are compared to where through DNA and gene sequencing you can compare alleles between different species and make evolutionary relationships between them. Where they are put into groups depending on how similar they are from one another.

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24
Q

What are the new domains and how did they come about?

A

Carl Woes

  • Proposed the three domains (Archaea, Bacteria and Eukaryota)
  • Based theory off molecular phylogeny
  • Created to solve that some bacteria didn’t fit the bacteria class from RNA sequencing
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25
Q

How is proposals like Carl Woes’ evaluated?

A

New scientific information is evaluated through

  • Conferences
  • Journals
  • Conducting the same experiments to validify the results and conclusions made.
  • Using scientists own knowledge to compare thinking
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26
Q

What does ultrastructure mean?

A

Cell ultrastructure is all the organelles in cell

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27
Q

What is the ultrastructure of a plant cell?

A
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28
Q

What is the cell wall and its functions?

A
  • Made of cellulose
  • Rigid structure surrounding cell
  • Supports structure
  • Prevents uptake of water
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29
Q

What is the plasmodesmata and its functions?

A

Plasmodesmata

  • cytoplasmic canal
  • Cell wall channels linking adjacent cells
  • Communication and transport between cells
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30
Q

What is the pits and its functions?

A
  • Where the cell wall is very thin
  • Arranged in pairs
  • Transport of substances
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31
Q

What is the chloroplast and its functions?

A
  • Small flattened structure
  • Double membrane
  • Inside is smaller thylakoid membranes
    • Stacked in some parts ← grana
    • Grana linked by lamellae (thin pieces of thylakoid)
    • Photosynthesis takes place
  • Photosynthesis also in stomata
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32
Q

What is the amyloplast and its functions?

A
  • Small membrane bound organelle
  • Stores starch granules
  • Stores starch grains and converts starch to glucose
33
Q

What is the vacuole and the tonoplast and thier functions?

A
  • Membrane (tonoplast) bound compartment
  • Tonoplast controls substance movement of vacuole
  • Has cell sap
  • Keeps cell turgid
  • Involved in breakdown and isolation of excess chemicals
  • Storage for organic compounds like proteins in seed cells
34
Q

What does a plant cell look like under a electron microscope?

A
35
Q

Why do cells use starch?

A

During photosynthesis plant cells would create glucose and store the excess in starch.

When it then needs to use this glucose starch is broken down to transfer energy.

36
Q

What is the structure of starch?

A
  • A mixture of amylose and amylopectin
  • Insoluble in water so cant travel through osmosis meaning good storage solution
37
Q

What is the structure of amylose?

A
  • Unbranched chain of alpha glucose
  • 1,4 glycosidic bonds
  • Compact coiled structure
38
Q

What is the structure of amlopectin?

A
  • Long branched chain of alpha glucose
  • Lots of side branches for easier breakdown → release of energy
39
Q

What is the cellulose used for?

A

Cellulose is the major component in cell walls

40
Q

What is the structure of cellulose?

A
  • A polysaccharide of beta-glucose
  • straight 1,4 glycosidic bonds making the chains straight
  • 50 - 80 chains + hydrogen bonds = Microfibrils
41
Q

How is cellulose used in cells walls?

A
  • In the primary cell wall cellulose is in a linear structure where microfibrils are parallel to each other for better strength
  • In the secondary cell wall microfibrils are in a net / matrix with the addition of lignin and where the cell wall can grow for even stronger plant fibers (secondary thickening)
42
Q

How does humans use plant fibres?

A

We use plant fibres for their strong structure in:

  • Ropes
  • Clothing
  • Fabrics like hemp
43
Q

What are xylem vessels and their use?

A
  • Water and mineral ions move in and out of the vessels through pits where there is no lignin
  • Long, tube like structures from dead cells found together in bundles
  • Walls thickened with lignin to provide extra support
  • Hollow limen with no end walls and no cytoplasm (Uninterrupted tube)
  • Water would diffuse out through the stomata (transpiration)
  • Cohesion and adhesion allows for a transpiration steam (cohesion tension theory)
44
Q

What are phloem tissue and their function?

A
  • Transports ORGANIC SOLUTES mostly sugars from production location to where they are needed (Translocation)
  • Cells arranged in tubes
  • Purely transport tissue
  • contains cells with sieve tube elements and companion cells
  • Sieve parts are end walls which has holes to allow for solutes to pass
  • Sieve tube elements have:
    • no nucleus
    • thin cytoplasm
    • few organelles
  • Companion cell aids survival or Sieve tube
    • Provides living functions for both itself and sieve tube like active transport to move the solutes up the tube
    • Where pumping increases pressure to where sucrose can move around the cell
45
Q

What are sclerenchyma fibres and their function?

A
  • For structural support of the plant tissue
  • Made up of dead cells running vertically up the stem
  • Long and wide with a hollow lumen with end walls
  • Contains lignin to thicken the cells
  • Contains more cellulose than xylem and phloem tubes
46
Q

Where are xylem vessels, phloem tissue found?

A

Xylem vessels and phloem tissue form vascular bundles which are grouped together in vascular bundles

47
Q

How are water and minerals taken in by the plant?

A

Water and mineral ions are absorbed by the roots and travel through the plant through the xylem vessel. Lack of this would lead to deficiency problems.

48
Q

What is water needed for in a plant?

A
  • Photosynthesis
  • Transport minerals
  • Structural rigidity
  • Regulation of temperature
49
Q

What are Magnesium ions needed for in a plant?

A
  • Chlorophyll production
  • Which effects rates of photosynthesis
  • Green pigment in leaves
50
Q

What are nitrate ions needed for in a plant?

A
  • DNA production
  • Protein production
  • Chlorophyll production
  • Plant growth and seed production
51
Q

What are calcium ions needed for in a plant?

A
  • Used in cell walls
  • Important for plant growth
52
Q

What happends to plants if there isnt enough magnesium ions?

A
  • Lack of chlorophyll production
  • Reduced rate of photosynthesis
  • Stunted growth
  • Decolourised leaves
53
Q

What happens to plants if there isnt enough nitrate ions?

A
  • Lack of DNA production
  • Leading to less proteins being produced
  • Meaning less mitosis
  • Meaning stunted plant growth
54
Q

What happens to plants if there isnt enough calcium ions?

A
  • Lack of strong cell walls
  • stunted growth
  • Weakened steam
55
Q

What is the link between foxglove and dropsy?

A

Foxgloves contain digitalis which causes a change in heartbeat which makes it a good treatment for dropsy

56
Q

How did he find the correct dosage of foxglove to treat dropsy?

A

After using chance observation to make the link between foxgloves and dropsy he used different concentrations and trial and error to find the correct dosage

To little dosage = no effect

To high dosage = patients poised

57
Q

What are the different stages of drug development?

A
  1. Preclinical
  2. Clinical trial phsae 1
  3. Cinical trial phase 2
  4. Clincal Trial Phase 3
58
Q

What happens in preclinical testing?

A
  • Animal and Lab testing
  • Cells and tissues
  • TO assess safety and effectiveness
59
Q

What happens in clinical trial phase 1?

A
  • Healthy volunteers
  • Small group
  • See if drugs are absorbed, distributed and excreted by predicted mechanisms
  • So determine correct dosage
60
Q

What happens in clincial trial phase 2?

A
  • Small group of people with the disease
  • Tests for effectiveness
61
Q

What happens in clincal trial phase 3?

A
  • Large group of patients split into two groups (larger = reliable)
  • Randomised double blind test
  • If all goes well drug is licensed and marketed
  • After licensing trials continue collecting data to test for safety and effectiveness
62
Q

What is a placebo?

A

Placebo - is where a person is given a inert drug without them knowing to see if the drug has any effect in a person without the placebo

If there is improvement with placebo then there is the placebo effect which proves the drug has no real effect

63
Q

What is a double blind test?

A
  • Where the groups is split into two groups a placebo group and a normal group
  • People in both groups don’t know what group they are in as well as the doctors giving the patients the actual drugs or placebo
  • This makes sure the administering of drugs is kept the same as well as the actions of the patient are kept the same
64
Q

What does aseptic techniques do?

A

They ensure that there is no cross contaminations when preparing samples to ensure there is only one bacteria in the culture

65
Q

What are the aseptic techniques?

A
  • Flaming every bottle used (EXCEPT ETHANOL)
  • Minimal opening of the agar plate
  • Never placing the lid on the table
66
Q

What is the method for agar plate preparations?

A
  1. Mark and divide the underside of the petri dish with the names of the antibacterial used as well as a section for control as well as the date using a marker and ruler
  2. Remove the nutrient agar from the water bath and dry using a paper towel
  3. Unscrew the cap on the nutrient agar and flame the mouth of the container
  4. Then lift the lid of the nutrient agar just enough to poor the agar to half the fill depth of the Petri Dish
  5. Then leave the agar plate to solidify
  6. Unscrew the cap of the bottle of bacteria and flame the mouth of the bottle
  7. Then draw a small amount through a pipette then flame the mouth of the bottle again and then screw the cap of the bottle back on.
  8. Then lift the petri dish lid just enough to add a few drops of culture to the agar then place the pipette in the disinfectant
  9. Then unwrap the spreader and flame the spreader
  10. Then lift the petri dish lid just enough to gently spread the culture drops across the agar
  11. Then flame the spreader or place in disinfectant
67
Q

What is the method for bacterial growth practical?

A
68
Q

What are sustainable products?

A
  • Sustainability is about using resources whilst preserving future generations
  • Sustainable products require renewable resources
69
Q

What are sustainable and unsustainable practices?

A

A sustainable practice could be replacing trees after logging as that preserves the trees

A unsustainable practice is a practice that can’t run indefinitely like using fossil fuels for plastics

70
Q

How can plant fibres contribute to sustainability?

A
  • Ropes can be made from plastics made from oil or plant fibers
  • Making plant fibre based products is more sustainable as less fossil fuels are used up resulting in crops being able to be regrown
  • Plant fibre products are biodegradable
  • Plants are easier to grow than exploiting oil making it cheaper and easier to do
71
Q

How can starch be used for sustainability?

A

Seeds contain starch which can be used for :

  • Adhesives
  • Paints
  • Textiles
  • conditioners
72
Q

What is gelatinisation?

A

The process of thickening starch granules where they are heated in water (for paper coatings and cloth treatment)

73
Q

What can vegetable oil be used for?

A

Seeds contain a lot of oil which is used in cooking but can also be used in fuels

Fuels

  • Vegetable oil can be used as oils instead of fossil fuels
  • Biodiesel produces less sulphur dioxide than diesel and less carbon dioxide
74
Q

What are the roles of zoos?

A

To conserve animals and play a vital role as research centers which allows deeper understanding of particular species

As well as a place for captive breeding and the eventual reintroduction of the species into the wild.

75
Q

What are captive breeding programmes?

A
  • Successful and safe breeding in zoos have lead to breeding programs which can occur situ (On site) and in some cases ex situ (Off site)
  • Which increases the population of a species
  • whilst maintaining the genetic diversity within the captive population
  • Eventually reintroducing them into the wild
76
Q

How does genetic drift and inbreeding depression link to breeding programmes?

A

Genetic Drift and Inbreeding depression occur when there is no genetic variety in the mates for a species in a small population.

Genetic Drift - where the gene pool of a species leads to a eventual decline in genetic variation

Inbreeding Depression - where recessive alleles are only inherited meaning that some recessive alleles are less fit to survive and reproduce

77
Q

How do you conserver genetic diversity in zoos?

A

Studbooks can be used to track genetic inheritance so that all genes and alleles can be represented in a population in subsequent generations

What animals should and shouldn’t breed together and a tracking of all the animals

Cytogenetics are used to aid studbook data where the structure of chromosomes.

78
Q

What are seed banks?

A
  • Store representative seed banks
  • Stored until they are needed
  • Stored in specific conditions so they will last decades
  • Seeds are regularly checked for germination
79
Q

What are the reasons for seed banks?

A
  1. Research purposes
  2. To replace seeds that are going extinct in certain areas
  3. To allow for a reduction in the loss of biodiversity because higher variety of crops means higher food production
  4. Plants remove CO2 from atmosphere
  5. Plants can be used in medicines