Theme 1- interpreting test results, fungal pathogens, parasites Flashcards
What are ideal tests? What is the correlation between sesnitivity and speicificity?
Rarely available in routine practice
High sensitivity and specificity rarely coexist
Increased sensitivity traded for decreased specificity and vice versa
What are strategies to improve tests?
Select a more appropriate ‘Normal’ population- compare heart attacks to group of elderly- more normal
Use a combination of tests - e.g. LFT profiles
Combine tests to achieve a diagnostic goal, e.g. neonatal screening for PKU and hypothyroidism
- Sensitive first line test (low cost)
- Specific test for screen positives (higher cost)
What are appropiate ‘normal’ populations to test?
Patients with similar presenting symptoms
e.g. chest pain
Same age
Same gender
Hospitalised ‘normals’
Same underlying disease
Why do we set cut offs for sensitive screening tests?
Sensitive screening test- pick up all the abnormal
What is cut off for specific second-line tests?
Readjusting and taking through second line removing the false positives by adjusting the limit
What are factors that affect the reference range?
- Age
- Gender
- Diet
- Pregnancy
- Time of month- menstruation cycle
- Time of day- cortisol
- Time of year- Calcium/Vit D
- Weight- can dilute yourself with water
- Stimulus- glucose can change the reference range
What is the diurnal rhythm of cortisol?
Cortisol at time of day different- normally taken at 9am or 12am
Reference range is tight- when asleep, during day reference range widens, midnight it narrows again. Gone up at mid-morning- stressed. 8pm- exercise
What is the glucose tolerance test?
- Give someone glucose- fasting ref range is 3-5
- Glucose intolerance- goes up- normally when diabetic when given glucose
What are substances that can’t use reference ranges?
Action Limits
- Cholesterol- more interested as a risk factor- cut offs to tell us the risk
- Paracetamol- no normal range as not normally in the body- needed for when poisoned
Therapeutic Ranges - for drugs
- lithium
- digoxin
What are the action limits for paracetamol?
If patient has overdose, take a measurement and decide whether they get antidote treatment. In the liver it is conjugated with glutathione but when runout liver gets damaged.
Can give treatments to replace glutathione and replace paracetamol into harmless products.
How is advanced glycosylated endprodutcs formed (AGE) formed?
Protein + Glucose —-> Advanced Glycosylated Endproducts (AGE)
Non-enzymatic process
Rate of formation proportional to
a) glucose concentration
b) time
May explain long-term complications of diabetes
Scientific basis of commonly used monitoring tests
What is HbA1c?
- HbA1c is stable glycosylated haemoglobin
- Its percentage concentration indicates cumulative glucose exposure
What are the types of fungi?
–Hypha = moulds
–Yeast cells = yeasts
Is fungi eukaryotic or prokaryotic?
Eukaryotic microorganisms
Single celled to macroscopic
How do fungi reproduce?
Reproduce asexually and/or sexually, spore formation
What are the type of fungal disease?
- Superficial infection
- Subcutaneous infection
- Systemic infection
What is a superficial infection? What are the types of fungi?
Superficial infection – affecting skin, hair, nails and mucocutaneous tissue
- Dermatophytes
- Malassezia
- Candida
What is subcutaneous infection?
Subcutaneous infection – affecting subcutaneous tissue, usually following traumatic implantation
What is systemic infection? What are examples?
- Systemic infection – affecting deep-seated organs
- Candida
- Aspergillus
What are dermatophytes? Where do they originate from?
- Group of moulds seen as causes of disease in skin, hair and nail
- Originate in soil, other animals or other humans
- Geophilic- soils
- Zoophilic- animals
- Anthropophilic- other humans
What are the disease names for dematophtye infections in the foot, nail and groin?
Tinea pedis, tinea unguium and tinea cruris
What are the disease names for dematophtye infections in the limbs and torso skin and scalp, skin and hair?
Tinea corporis and tinea capitis
Where are fungal nail infections most common, athletes foot and scalp ringworm?
Fungal nail infection, common in the general adult population, probably 5-25% rate, increasing incidence in elderly people
Athlete’s foot more common than onychomycosis, more common in adults (not younger people) and sportsmen.
Scalp ringworm most common among prepubertal children. Recent US survey, tinea capitis found in 6% of children. Estimated global prevalence of 200 million cases.
What are the symptoms of tinea pedis?
- Uni- or bilateral,
- Itching, flaking, fissuring of skin
- Plantar: Soles of feet dry and scaly, if skin of whole of foot affected “Moccasin foot”
- Hyperhidrosis, secondary to infection may increase severity
- May spread to infect toe nails
- Typical cause Trichophyton rubrum
What is tinea unguium? What are the symptoms?
Thickening, discolouring, dystrophy, four main types
i) Lateral/distal subungual
Ii) Superficial white – usually
in immunocompromised
iii) Proximal
iv) Total nail dystrophy
Typical causes
Trichophyton rubrum and
T. interdigitale
What is tinea curis? What are the symptoms?
- More prevalent in men than women
- Itching, scaling, erythematous plaques with distinct edges
- Satellite lesions sometimes present
- May extend to buttocks, back and lower abdomen
- Typical cause T. rubrum
What is tinea capitis? What are symptoms?
- Mainly seen in pre-pubescent children
- Signs range from: slight inflammation, scaly patches, with alopecia, “black dots”, “grey patches” to severe inflammation
- Kerion celsi: boggy, inflamed lesions, usually from zoophilic dermatophytes
What is tinea corporis? What are the symptoms?
- Circular, single or multiple erythematous plaques
- May extend from e.g. scalp or groin
- Invasion of follicle “Majocci’s granuloma”
- Typical cause , wide range of dermatophytes, anthropophilic or zoophilic
What is the investigation and treatment of dermatophyte infection?
- Investigation: Microscopy and culture
- Treatment:
- Topical antifungal therapy: mild disease (self-diagnosis and treatment)
- Terbinafine, clotrimazole,miconazole
- Systemic antifungal therapy: severe disease
- Treat ALL cases of tinea capitis with systemic oral antifungals
- Griseofulvin, terbinafine, itraconazole (depends on causal species)
- Topical therapy will NOT be curative (role in reducing spread)
What is malassezia? What are examples?
Genus of yeasts
E.g. M. sympodialis, M. restricta and M globosa
Where is malassezia found?
- Part or normal skin flora in all humans from shortly after birth
- Highest levels on head and trunk
What is the cause of pityriasis versicolor?
Malassezia
What is pityriasis versicolor?
Hyper- or hypopigmented lesions
Upper trunk
Between puberty and middle age
More common in tropics
Relapsing
What is the diagnosis and treatment of pityriasis veriscolor?
Microscopy
- Yeast cells and hyphal segments “Spaghetti and meatballs”
- Culture difficult and not interpretable
Treatment
- Topical antifungals eg. clotrimazole, if fails oral fluconazole or itraconazole
What are candida?
•Large genus of yeasts
Where do candida colonise?
Often colonises the mucosal sufaces and GI tract in healthy people
What does candida do?
- Cause of superficial mucosal (oral and vaginal) disease “thrush”, also occasionally skin disease and keratitis
- Cause of systemic disease, once present in circulatory system, can infect almost any organ in the body
What does oral candidosis do?
Angular cheilitis- inflammation in the corners of the mouth
Chronic hypoplastic (oral leukoplakia)- white spots (top pic)
Chronic atrophic erythema- red lesion on tongue (bottom pic)
What is the epidemiology of oral candidosis?
- HIV/AIDS – sometimes even with Anti-retroviral therapy, T-cell immunity important to prevent mucosal candidosis
- Antibiotic use – suppresses normal bacterial flora, less competition for yeasts
- Head and Neck cancer – radiotherapy and chemotherapy affect salivary secretions
- General debilitation in hospitalised patients e.g. in ICU – increases colonisation and risk of oral disease
What is candida vulvovaginitis? Who does if effect? What are the symptoms?
- Affects 70-80% all women at least once during child-bearing years
- Inflammation of vaginal epithelium, may extend to labia majora
- Pruritis, burning sensation, +/- discharge
How do you diagnose superficial candiosis?
Clinical diagnosis and empiric therapy
Culture with identification and antifungal sensitivity testing where appropriate eg. Recurrent disease
What is the treatment for superficial candidosis?
- Usually oral azoles, fluconazole highly effective
- Resistance in normally sensitive species (e.g. Candida albicans) or naturally resistant species (Candida krusei) can be problem
- Do NOT use oral fluconazole or other azoles in pregnant women, this increases risk of teratologies (e.g. heart defects), use topical azoles eg clotrimazole
What is systemic candidosis? Where does it infect?
- Candida sp can infect almost any organ in the body
- Defined by site of infection
- Usually acquired from colonised skin or mucosal sites, or from GI tract
- Usually seen in the compromised host
- Candida albicans still most common, other species also occur
- Disseminated disease may be identified from blood culture
What are candida oesophagitis symptoms? Caused by what?
- Candida oesophagitis in 10-20% patients with oropharyngeal disease
- Pain/difficulty on eating/swallowing
- Mainly in HIV
- Diagnosed by endoscopy with biopsy
What is candidaemia?
Candida in blood culture
How do you treat candidaemia?
- Remove lines (where possible)
- Start antifungal therapy
- Check eyes and heart
What is candida chorioretinitis?
Chorioretinitis is an inflammation of the choroid (thin pigmented vascular coat of the eye) and retina of the eye
What is candida endophthalmitis?
Endophthalmitis is inflammation of the interior cavity of the eye, usually caused by infection.
What disease can be caused due to candidaemia?
Risk of occular candidosis (OC) following candidaemia 3-25%. Of those patients:
Chorioretinis c. 75% OC
Endophthalmitis- white balls seen on fundoscopy c. 25% OC, requires intravitreal antifungals
What is candida endocarditis?
Vegetations seen on heart valves
Candidaemia can cause candida endocarditis. What are the symptoms and what causes it?
- Vegetations seen on heart valves
- Fever, weight loss, fatigue, heart murmur
- IV drug abusers, valve surgery
- Difficult to treat without valve replacement
Where is urinary tract candida infection found?
Ascending from genital tract infection/colonisation or from catheterisation
Who is likely to have urinary tract candida infection?
More common in women, diabetics, damaged/abnormal urinary tracts, ICU patients
What is candiduria?
Candiduria (isolation of Candida from urine) common, may or may not be significant