Tests for Enterobacterales Flashcards

1
Q

What is the purpose of the ONPG test (o-Nitrophenyl-B-D-Galactopyranoside)?

A

To determine if organism has B-galactosidase (ferments lactose) regardless of the presence of the enzyme permease. Distinguishes LLF from NLF (permease does not count).

Permease transports lactose into the cell and LLF do not have that enzyme. The ONPG substrate is structurally similar to lactose, and permeates the cell without the enzyme.

Note: B = beta symbol

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2
Q

How do you interpret the ONPG test and what is its limitations?

A

Pos: Yellow
Neg: No colour change.

If the org has B-galactosidase enzyme, it will cleave ONPG into galactose (structurally similar to lactose) and orthonitrophenol (yellow color).

Test cannot performed on an organism with an obvious yellow pigment.

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3
Q

What are the control of ONPG?

A

Pos Control: E.coli
Neg Control: Proteus mirabilis

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4
Q

What is the purpose of the ONPG-PAM test?

A

Used to test an organisms ability to ferment lactose, produce phenylalanine deaminase and motility.

Useful in ID of Morganella, Providencia, and Proteus spp.

PMP group is Phenylalanine +.

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5
Q

How does ONPG-PAM detect LF, Phenylalanine deaminase, and motility?

A

LF - from ONPG substrate - yellow color means pos.
Phenylalanine is in media, if the org has phenylalanine deaminase it will deaminate it to
phenylpyruvic acid detected by adding 10% FECl3 which turns green if pos.
Motility - detected by lower agar conc. - diffuse growth from line of inoculum.

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6
Q

What is the reagent in the oxidase test?

A

di(tetra)methyl-p-phenylenediamine dihydrochloride

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7
Q

What is the main purpose of the oxidase test?

A

Use in ID schemes of most gram neg orgs. RRC: Presumptively IDs Neisseria spp. and separates Enterobacteriacae from Ox pos Pseudomonadaceae and other non-glucose fermenters.

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8
Q

What is the principle of the Oxidase teset?

A

Cytochrome oxidase (iron containing hemoproteins) participates in the electron transport and in the nitrate metabolic pathways of certain bacteria. The enzyme acts as the last link in the chain of aerobic respiration by transferring electrons to oxygen with the formation of water.

System found in aerobes, facultative anaerobes, microaerophilic orgs but not strict anaerobes.

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9
Q

What are the limitations with performing the Oxidase test?

A

Cannot be used from colonies from MAC or media containing dyes.
False positives can occur if SS or nichrome loops are used.
False negs may occur in cultures mixed with Pseudomonas with Neisseria (although both are Ox +).

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10
Q

What is the purpose of the Oxidation/Fermentation (O/F) Test?

A

Differentiate organisms based on their ability to ferment or oxidize carbohydrates (glucose*).

*Many different carbs can be used (maltose, sucrose, lactose, mannitol or xylose).

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11
Q

How are the two different oxidative and fermentative environments created in the O/F test?

A
  1. Use of a carb by an oxidative process occurs in an aerobic environment.
  2. Use of a carb fermentatively occurs in an anaerobic environment.
  3. Two tubes are used, after inoculation 2/ a straight stab one tube is incubated with the cap loose for oxidative, and the other is overlayed with mineral oil and cap tightened to help create anaerobic environment.
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12
Q

What is the indicator for the O/F test and how does it work?

A

Indicator is bromothymol blue, which turns yellow in an acid environment. High sugar to peptone ratio is used to reduce alkaline end-products that could neutralize acids produced.

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13
Q

What would be the O/F test results for an only oxidative, fermentative, asaccharolytic (non-saccharolytic) organisms?

A

Oxidative: +/- (open tube yellow, closed tube green)

Fermentative: +/+ (open tube yellow, closed tube yellow)

Asaccharolytic: -/- (open green or blue, closed tube green or blue)

Yellow means acid products, green alkaline.

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14
Q

What special consideration should be given Pseudomonas, Stenotrophomonas, or Burkholderia for the O/F test?

A

Should be incubated at 30C. These organisms are more active at lower temperature.

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15
Q

What are the controls for the O/F test?

A

(-/-) = Alcaligenes faecalis
(+/-) = P. aeruginosa
(+/-) = Enterobacter aerogenes

Controls depends on what carbs are used.

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16
Q

What is the use of the Indole test?

A

Determine if an organism can hydrolyze tryptophan to indole via tryptophanase.

17
Q

What are the two agents used for the Indole test?

A
  1. p-Dimethyl-amino-benzldehyde (Red+, no color - )
  2. p-Dimethyl-amino-cinnamaldehyde (Blue +, no color -)
    (recommended for spot test)
18
Q

What QC are used for the Indole test?

A

Indole QC:
E.coli +
P.aeruginosa -

19
Q

What test determines enterobacterales’ metabolic pathway and their reagents?

A

MR-VP

Methyl Red (reagent - same)
Voges-Proskauer (reagents: alpha-naphthol and 40% KOH).

Red +
No colour -

20
Q

What is the use of the SIM test?

A

SIM tests for
S - H2S production (black+)
I - Indole (red+)
M - Motility (turbidity away from stab+)

QC - certificate of analysis of tube media

21
Q

What tests determines if an organism uses citrate as the sole carbon source and what are the reagents?

A

Citrate

Reagents are:
a) Sodium citrate
b) Bromothymol blue

Blue +
No colour change -

22
Q

What does the decarboxylases tests determine?

A

Determines if an organism is able to decarboxylate specific amino acids.

Note: Decarb is an ANO2 process that requires an acid environment for activation.

23
Q

What are some of the reagents used in the dexcarboxylases test and interpretations of the results?

A
  1. Lysine or
  2. Ornithine or
  3. Arginine

and
Bromocresol purple

Purple and turbid +
Yellow = -
Compare to control tube - should be yellow.

24
Q

What is the purpose of the control tube in the decarboxylases test?

A

The control tube is set up without the amino acid (lysine or arginine or ornithine) but with the same other ingredients. The tube has to turn yellow to show the organism can ferment glucose first to be able to read the other tests.

25
Q

What is the purpose of the TSI test?

A

Differentiates enterobacteriaceae from other g-b, helps ID GNB and used for enteric screening.

26
Q

What are the reagents in the TSI test?

A

1 part glucose and peptones, 10 parts sucrose, and 10 parts lactose with penol red and ferric ammonium citrate.

27
Q

How does one interpret the TSI test?

A

Yellow = acid = A
Red = alkaline = K
No change = NC
Gas = G
H2S = black+

Read as slant/butt/gas,H2S+/-

28
Q

What is the purpose of the nitrate reduction test?

A

Determine if an organsium is able to reduce nitrate to nitrite or N2 gas.

Nitrate and durham tube. May need to add sufanilic acid, alpha-naphthylanine, or zinc.