TCA Cycle Flashcards

1
Q

what are the major products of the TCA cycle?

A

GTP, NADH and FADH2

these can produce large amounts of free energy in the form of ATP via oxidative phosphorylation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

what’s the overall process of TCA? (short and sweet)

A

TCA oxidizes the acetyl fragment of acetyl CoA to CO2

In the process, 8 high every e- are captured in the form of NADH and FADH2

AcetylCoA –> 8 e- + ATP + 2CO2

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what are the two major functions of TCA?

A
  1. energy production

2. biosynthesis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

where does the TCA cycle happen?

A

mitochondria

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what is another name for the TCA cycle?

A

Krebs

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

why is acetyl CoA what’s used in TCA?

A
  1. it’s the common product of catabolism of fat, carbohydrates, and proteins = you’re producing most of the reduced coenzymes that are used to make ATP in the ETC
  2. provides intermediates for other anabolic reactions
    - glucose formation from AA carbon skeletons
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what are the two stages of TCA?

A
  1. two carbons are introduced into the cycle by condensation of an acetyl group with oxaloacetate –> these two carbons leave the cycle as CO2 late when citrate undergoes two oxidative decarboxylations
  2. oxaloacetate is regenerated by oxidizing a 4 carbon unit
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

does the TCA generate ATP or use oxygen?

A

Not really - no ATP is directly generated or oxygen used in the TCA cycle

the TCA cycle doesn’t really generate a large amount of ATP nor use oxygen (besides the acetyl group being oxidized to CO2)

it removes e- from citrate and uses them to form NADH and FADH2 which enter the ETC to generate a proton gradient used to make ATP

**TCA cycle will not proceed in the absence of oxygen!!!

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

how are the TCA cycle and ETC connected?

A

TCA is the first stage in cellular respiration! it removes high energy e- from carbon fuels which reduce O2 to generate a proton gradient

the proton gradient is used to make ATP

reduction of O2 and synthesis of ATP are oxidative phosphorylation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what two things make up oxidative phosphorylation?

A
  1. reduction of O2 in the ETC

2. synthesis of ATP via the proton gradient produced

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what are syntheses?

A

enzymes that catalyze a synthetic reaction in which two units are joined usually without the direct participation of ATP or any other nucleoside triphosphate

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what is the first reaction of TCA?

A

citrate synthase catalyzed the condensation of oxaloacetate with acetyl CoA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what can citrate be used for outside of TCA?

A
  1. it’s an intermediate of the TCA cycle
  2. a source of acetyl CoA for the cytosolic synthesis of fatty acids and cholesterol
  3. it’s an allosteric effector that inhibits PFK1 in glycolysis and activates acetyl CoA carboxylase in fatty acid synthesis
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what is the 2nd step of TCA? why does it happen?

A

citrate is isomerize into isocitrate via aconitase enzyme

there’s an interchange of H and OH groups on carbon 2 and 3 when you remove water and then put it back in

this step happens because citrate isn’t optimally suited for the oxidation reactions!

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what is the 3rd step in TCA?

A

isocitrate is oxidized and decarboxylated to alpha-ketoglutarate via isocitrate dehydrogenase

a high energy electron is captured in the form of NADH and a CO2 is produced

isocitrate dehydrogenase is inhibited under energy-rich conditions by high levels of NADH and ATP

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

what inhibits isocitrate dehydrogenase? activates?

A

isocitrate dehydrogenase is inhibited under energy-rich conditions by high levels of NADH and ATP

so after a carb heavy meal, it’s inhibited which causes intramitochondrial accumulation of citrate which is then exported to the cytosol for lipogenesis

citrate also inhibits PFK1 in glycolysis and activates acetyl-CaA carboxylate which is the rate-limiting step in fatty acid synthesis

isocitrate dehydrogenase is activated when NA+ and ADP levels are high due to them being produced by metabolism

17
Q

what is the fourth step in TCA?

A

succinylcholine CoA is formed by the oxidative decarboxylation of alpha-ketoglutarate via alpha-ketoglutarate dehydrogenase complex

NADH is generated and CO2

succinyl CoA is a high energy thioester compound

*very similar to pyruvate dehydrogenase complex - has three subunits with E1, E2, E3

18
Q

what is the 5th step in TCA?

A

succinyl CoA synthetase catalyzes the cleavage of a thioester linkage and concomitantly forms ATP

free energy released from succinyl CoA is used to form GTP

this is a substrate level phosphorylation reaction! like pyruvate kinase reaction in glycolysis

19
Q

what is the 6th step in TCA?

A

regeneration of oxaloacetate by the oxidation of succinate via succinate dehydrogenase, fumarate and malate dehydrogenase (successive reactions)

FADH2 and NADH are generated

now oxaloacetate can condense with another acetyl CoA to initiate another cycle

  1. oxidation of succinate to fumarate via succinate dehydrogenase which is embedded in the inner mitochondrial membrane and is a part of the complex II of ETC
  2. fumarate catalyzes formation of malate from fumarate
  3. malate is oxidized to oxaloacetate by malate dehydrogenase
20
Q

where is fumarate also found?

A

fumarate is also synthesized in the urea cycle and during the catabolism of the AA phenylalanine and tyrosine

21
Q

what is the net reaction of TCA?

A

Acetyl CoA + 3NAD+ + FAD + ADP + Pi + 2H2O –> 2CO2 + 2NADH + FADH2 + ATP + 2H+ CoA

4 pairs of e- are transferred during one turn of the TCA cycle from the reduction of NAD+ and FAD to NADH and FADH2

22
Q

what do the electrons from NADHs produced do?

A

oxidation of ONE NADH in the ETC produces THREE ATP!!!

23
Q

what do the electrons from FADH2 do?

A

oxidation of ONE FADH2 produces TWO ATP!!!

24
Q

What is the total yield of ATP from the oxidation of one acetyl CoA?

A

12!!!!

9 from three NADH

2 from FADH

1 from GTP

25
Q

is there consumption or production during TCA?

A

Nope

two carbons entering via acetyl CoA are balanced by the two carbons exiting as CO2