Studies - Authors, Years, Facts Flashcards by Aislinn Cottage

Modelling study looking at end-Permian climate

Author and year

Penn et al (2018)

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Modelling study looking at end-Permian climate

Degree change at the poles

5 - 20 degrees

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Reconstruction of sea level changes over the last few my

Author and year

Spratt and Lisiecki (2016)

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Reconstruction of sea level changes over the last few my

Over last ….. y, sea level changes of ….. below present

700,000 y

100 - 150 m

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Study looking at describing new species

Author and year

Appeltans et al (2017)

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Estimates of number of marine species compared to actual and in space
Author and year

Costello and Chaudhary (2017)

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Estimates of number of marine species compared to actual

Fraction of chromista we think we’ve described

1/4

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Estimates of number of marine species using accumulation curves
Author and year

Mora et al (2011)

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Estimates of number of marine species using accumulation curves
Estimate of how many species

Over 2 million

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Estimates of number of marine species using accumulation curves
Problems

Only 1 Archaea taxon

Only 600 bacterial species

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Identification of marine biogeographic realms

Author and year

Costello et al (2017)

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Diversity in the coral triangle

Author and year

Bellwood et al (2005)

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Diversity in the coral triangle

Number of fish species known from each habitat

Over 500

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Diversity of forams in the coral triangle

Author and year

Forderer at al (2018)

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Looking at species distributions to hypothesise why coral triangle diverse
Author and year

Bowen et al (2016)

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Hypotheses for coral triangle biodiversity

Author and year

Matias and Riginos (2018)

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Looking at how old species in the coral triangle are and where they came from (hopping biodiversity hotspots)
Author and year

Renema et al (2008)

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Looking at how old species in the coral triangle are

General ages

5 million yo or more

Some up to 50 million yo

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Estimated presence of coral reefs over time and patterns of diversity
Author and year

Leprier et al (2016)

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Estimated presence of coral reefs over time and patterns of diversity
Model predicts patterns seen occur when:

Tectonic-driven bathymetry changes
Speciation driven by shallow habitat divergence
Sympatric speciation related to shallow habitat occupancy area

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Study looking at past coral reef area, isolation from refugia and reef fish richness
Author and year

Pellissier et al (2014)

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Age of species and movement to or from coral triangle

Author and year

Evans et al (2018)

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Increase in plastic debris and colonisation

Author and year

Carleton et al (2017)

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Increase in plastic debris and colonisation

Number of species colonising W coast of US

Over 200

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Tara Oceans sampling DNA survey (oceanic microbial diversity) Author and year

Sunagawa et al (2015)

Tara Oceans sampling DNA survey | Percentage of genes sampled that had not been seen before after filtering down to 40 million had greatest confidence in

80%

Tara Oceans sampling DNA survey | Number of genes we know about

15,000 - 20,000

Tara Oceans sampling DNA survey | Percentage DNA from bacteria, archaea and eukaryotes

Bacteria - 60% Archaea - 2% Eukaryotes - 3%

Tara Oceans sampling DNA survey | % variation explained by temperature

62%

Tara Oceans sampling DNA survey | Number of genes common to the epipelagic and mesopelagic

7,000

Oceanic eukaryotic plankton diversity | Author and year

De Vargas et al (2015)

Oceanic eukaryotic plankton diversity | Number of OTUs and how much more diversity was found than described

150,000 OTUs | 10 x more

Metabarcoding the hard benthos | Author and year

Leray et al (2015)

Metabarcoding the soft benthos | Author and year

Guardiola et al (2015)

eDNA study | Author and year

Thomsen and Willerslev (2015)

eDNA study | Filter size

0.22 micron

eDNA metabarcoding teleosts in estuarine systems | Author and year

Stoeckle et al (2017)

eDNA as a tool for finding rare marine species | Author and year

Pikitch (2018)

eDNA metabarcoding sharks | Author and year

Boussarie et al (2018)

eDNA metabarcoding sharks How many species known from region historically and how many detected in total, by eDNA alone, by UVC alone and by BRUVs alone?

``` Historically = 26 Detected = 16 eDNA = 13 UVC = 9 BRUVs = 9 ```

eDNA whale shark population genetics | Author and year

Sigsgaard et al (2016)

eDNA whale shark population genetics | Loci looking at

DL1 | DL2

Rate of degradation of eDNA over time | Author and year

Collins et al (2018)

eDNA vs fisheries surveys | Author and year

Thomsen et al (2016)

Diversity of marine fishes, phylogenies and speciation | Author and year

Rabosky et al (2018)

Diversity of marine fishes, phylogenies and speciation | What is speciation rate associated with?

Temperature Endemicity Species richness

Flounder speciation along salinity gradient | Author and year

Momigliano et al (2017)

Stickleback speciation along temperature and salinity gradient Author and year

Guo et al (2015)

Atlantic cod adaptation along temperature and salinity gradient Author and year

Berg et al (2015)

Atlantic cod adaptation along temperature and salinity gradient % salinity where strong barrier to gene flow

Between 10% and 7%

Atlantic cod adaptation along temperature and salinity gradient Chromosome associated with spawning depth

Chromosome 2

Adaptation to depth gradients | Author and year

Kellet et al (2016)

Depth adaptation beaked redfish study | Author and year

Shum et al (2014)

Depth adaptation roundnose grenadier | Author and year

Gaither et al (2018)

Depth adaptation roundnose grenadier | Shallow and deep depths

``` Shallow = 1000 m Deep = 1,500 m (Deepest = 1,800 m) ```

Depth adaptation in shallow water | Author and year

Whitney et al (2018) | Two studies in same year

Depth adaptation in shallow water | Locus under selection

MC1R

Snail adaptation to different hosts | Author and year

Simmonds et al (2018)

Local adaptation and speciation surgeonfishes study | Author and year

Gaither et al (2015)

Killer whale divergence / speciation | Author and year

Morin et al (2015)

What is driving killer whale divergence / speciation | Author and year

Foote et al (2016)

Adaptation and climate change | Author and year

Vargas et al (2017)

Active acoustics methods | Author and year

Benoit-Bird and Lawson (2016)

Active acoustics DVM | Author and year

Klevjer et al (2016)

Active acoustics for biomass estimation

Irigoien et al (2014)

Active acoustics for biomass estimation | Estimated mesopelagic fish biomass

11,000 - 15,000 million tonnes

DVM during the polar night | Author and year

Last et al (2016)

PAM gulf corvina mating | Author and year

Erisman and Rowell (2017)

Right whale PAM monitoring | Author and year

Davis et al (2017)

Lizard island coral reef noise | Author and year

Gordan et al (2018)

Acoutsic tags showing space use of goatfish | Author and year

Meyer (2017)

Acoustic tags showing space use of Atlantic cod

Frietas et al (2015)

Satellite tags | Author and year

Hussey et al (2015)

Basking sharks behaviour satellite tags | Author and year

Doherty et al (2017)

Satellite tag species space use | Author and year

Harrison et al (2018)

Satellite images for biodiversity mapping (great whale) | Author and year

Cubaynes et al (2018)

Satellite images of emperor penguin colony | Author and year

Fretwell and Tratham (2009)

Satellite images of king penguin colony | Author and year

Weimerskirch et al (2018)

Satellite images of king penguin colony | Colony decline over last 5 years

500,000 pairs to 60,000

AUV use in geosciences / bathymetric mapping | Author and year

Wynn et al (2014)

AUVs for ecological sciences | Author and year

Morris et al (2014)

AUVs for tracking animals | Author and year

White et al (2016)

Landers study | Author and year

Linley et al (2016)

Kermadec Trench lander study | Author and year

Jamieson et al (2011)

Jellyfish lander study | Author and year

Sweetman et al (2014)

Landers, speciation, habitat preference and abundance in the deep sea Author and year

Linley et al (2016)

Landers and species abundance | Author and year

Linley et al (2018)

Landers and species abundance | Density of fish in deep sea

10 fish per km^2

Greenland shark BRUV study | Author and year

Devine et al (2018)

Static autonomous sampling of plankton (looking at bioluminescence) Author and year

Cronin et al (2016)

Autonomous flying vehicles and coral bleaching | Author and year

Levy et al (2018)

Autonomous flying vehicles and coral bleaching | Error rate at 0.5 m

50%

Autonomous time lapse camera and southern right whales | Author and year

Rayment et al (2018)

Autonomous technology and crown of thorns starfish | Author and year

Takemura et al (2015)

Using remote sensing to monitor harmful algal blooms | Author and year

Stumpf et al (2003)

Toxic dianoflagellate that produces brevetoxins | Author and year

Tester and Steidinger (1997)

European HABs | Author and year

Miller et al (2006)

Using remote sensing to monitor ocean colour | Author and year

Dutkiewicz et al (2019)

Using remote sensing to monitor coral bleaching | Author and year

Mumby et al (2004)

Common types of trawl system | Author and year

Steppurs et al (2016)

Common types of trawl system | 2 most common

Bongo plankton nets | Tucker trawl

Deep sea viruses | Author and year

Danovaro et al (2008)

Deep sea viruses | How many

10^30 - 10^31

Deep sea viruses - role in the deep sea | Author and year

Corinaldesi (2015)

Deep sea viruses - role in the deep sea | How much carbon released?

0.37-0.63 gigatonnes

Bioluminescence uses - camouflage | Author and year

Widder (2001)

Bioluminescence uses - behaviour / antipredator | Author and year

Haddock et al (2010)

Bioluminescence - why closely related lineages accumulate species at different rates Author and year

Ellis and Oakley (2016)

Extremophiles - adaptation to pressure | Author and year

Somero (1992)

Extremophiles - adaptation to pressure - homeoviscous adaptation Author and year

Cossins and MacDonald (1989)

Extremophiles - protein compressability | Author and year

Porter, Roberts and Partridge (2016)

Idea of chemical speciation | Author and year

Luther et al (2001)

CO2 vents and communities | Author and year

Hall-Spencer et al (2008)

CO2 vents and communities | Proportion of species lost at what change in pH?

Change - 8 to 7.8 | Species lost - 1/3rd

Ocean acidification over geological history | Author and year

Hönisch et al (2018)

DVM - variance of behaviour of closely related species | Author and year

Donaldson (1975)

Using echosounders to see DVM | Author and year

Brierley (2014)

Using echosounders to see DVM - different locations | Author and year

Klevjer et al (2016)

Better hungry than dead principle | Author and year

Kremer and Kremer (1988)

Competitive exculsion | Author and year

Hardin (1960)

Initial discovery that many DVM species of Euphausiid only feed at night Author and year

Rogers (1973)

Effects of changing climate on DVM | Author and year

Brierley and Kingsford (2009)

Effects of ocean acidification on DVM | Author and year

Fabry et al (2008)

Different impacts on DVM species from climate change (review) Author and year

Bednaršek et al. (2016)

Communication between marine organisms - grouper and moray eel Author

Bshary et al

Communication between marine organisms - initial paper | Author and year

Behsary et al (2006)

Communication between marine organisms - second paper | Author and year

Vail et al (2013)

Communication between marine organisms - third paper - focussing on different species Author and year

Vail et al (2014)

Hearing sensitivity of baked whales | Author and year

Pacini et al (2011)

Zones of influence | Author and year

Richardson et al (1995)

Zones of influence | The zones

Detection Masking Response Hearing loss, discomfort, injury

``` Bahamas BRS (sonar) Author and year ```

Tyack et al (2011)

``` Bahamas BRS (sonar) Year done in ```

2007

SOCAL BRS - beaked whale (sonar) | Author and year

DeRuiter et al (2013)

SOCAL BRS - blue whales (sonar) | Author and year

Goldbogen et al (2013)

SOCAL BRS - blue whales (sonar) | Different foraging depths

Shallow - 20 m | Deep - 150 - 200 m

SOCAL BRS - blue whales (sonar) Normal feeding rate Amount of time stopped feeding Amount of food lost during response

19 kg per minute 62 minutes 1 metric ton

Paper looking at quantitative data from 2015-2016 bleaching event Author and year

Hughes et al (2018)

Paper looking at quantitative data from 2015-2016 bleaching event % coral lost in N 1/3rd

60%

Geographic pattern of bleaching in GBR | Author and year

Hughes et al (2017)

Geographic pattern of bleaching in GBR - DHWs | Author and year

Hughes et al (2018)

Species patterns of loss during bleaching | Author and year

Hughes et al (2017)

What can be done? - some corals can cope | Author and year

van Oppen et al (2015)

What can be done? - some corals can cope - transcriptomic analysis Author and year

Dixon et al (2015)

POPs | Author and year

Desforges et al (2018)

Vulnerability of elephant seals to POPs | Author and year

Peterson et al (2015)

POPs in the deep sea | Author and year

Dasgupta et al (2018)

POPs in the deep sea amphipods | Author and year

Jamieson et al (2007)

Marine plastic pollution classifications | Author and year

Paul-Point et al (2018)

Sources of marine plastic | Author and year

Jambeck et al (2015)

Sources of marine plastic | Tonnes of plastic into seas every year

8-12 million tonnes

Sources of marine plastic | % plastic coming in through river systems

80%

Sources of marine plastic - more detailed study | Author and year

Lebreton et al (2017)

Where does plastic pollution go? | Author and year

Kaiser (2010)

Plastic and marine seabirds | Author and year

Worm et al (2015)

Plastic and marine seabirds - metanalysis | Author and year

Wilcox et al (2015)

Plastic and marine seabirds - metanalysis and risk | % individuals with plastic in gut

29%

Plastics in the deep sea | Author and year

Taylor et al (2016)

Plastic risk to marine life - corals - Lophelia | Author and year

Chapron et al (2018)

Plastic risk to marine life - corals - shallow | Author and year

Lamb et al (2018)

Absorption of pollution by plastics | Author and year

Rochman et al (2012)

Absorption of pollution by plastics | Plastics

``` HDPE LDPE PP PVC PET ```

Absorption of pollution by plastics - Norway lobster, shearwaters Author and year

Devriese et al (2017)

Absorption of pollution by plastics - Norway seabirds | Author and year

Tanaka et al (2013)

Transport of marine plastics | Author and year

Paul-Point et al (2018)

Transport of marine plastics | % from land and sea

Land - 80% | Sea - 20%

What can we do about it? | Author and year

Wilcox et al (2016)

Stressors on marine systems | Author and year

Halpern et al (2008)

Stressors on marine systems - more recent | Author and year

Halpern et al (2015)

MPAs | Author and year

Watson et al (2014)

MPAs | When did they start being created?

1980s

Direct and indirect effects of MPAs | Author and year

Grorud-Colvert et al (2010)

Mediterranean MPA | Author and year

García-Rubies et al (2013)

European shelf seas MPA - lobsters | Author and year

Kleiven et al (2019)

European shelf seas MPA - lobsters | How long does it take to see benefit

2 years

Chagos archipelago MPA | Author and year

Graham et al (2018)

Focus on wilderness with land? (MPAs) | Author and year

Watson et al (2016)

Focus on wilderness with MPAs? (MPAs) | Author and year

Jones et al (2018)

Focus on wilderness with MPAs? (MPAs) | Marine wilderness area

2.67 million km^2

Focus on wilderness with MPAs? (MPAs) | % marine wilderness protected

Fishing data - MPAs | Author and year

Kroodsma et al (2018a)

Fishing data - MPAs | % ocean covered by industrial fisheries

55%

Fishing data - MPAs - are 55% of seas really fished at all times? Author and year

Amoroso et al (2018)

Fishing data - MPAs - really 55% - response | Author and year

Kroodsma et al (2018b)

How effective are MPAs? | Author and year

Dureuil et al (2018)

What makes a good MPA? | Author and year

Edgar et al (2014)

What makes a good MPA? | What should you do?

Use dive surveys to look at diversity and abundance Model environmental variables against dive surveys abundance and scale up spatially Compare dive survey results to modelled expectations

What management methods help MPAs? | Author and year

Gill et al (2017)

MPAs and the public | Author and year

Visbeck et al (2018)