Sex Chromosomes Flashcards

1
Q

There is only one type of sex chromosome, that found in mammals. True or false?

A

False; sex chromosomes have evolved convergently multiple times

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2
Q

All organisms with GSD have defined sex chromosomes. True or false?

A

False; some have autosomes with a small region that contributes to sex, e.g. the M region in Musca (flies)

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3
Q

Both sex chromosomes are always functional. True or false?

A

False, e.g. the mammalian Y is non-functional

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4
Q

All organisms with sex chromosomes have two. True or false?

A

False; some only have one, e.g. some insects are X0

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5
Q

What are sexually antagonistic alleles?

A

Those that are beneficial in one sex but detrimental to the other.

Alleles are exposed to different selection pressures depending on which sex they are in.

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6
Q

How can sexually antagonistic alleles spread to fixation?

A

They must be linked to sex-determining loci so that they always end up in the sex they are beneficial to

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7
Q

What kind of chromosomal rearrangements suppress recombination and favour linked alleles?

A

Inversions

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8
Q

In XY systems, which chromosome is riddled with inversions?

A

The Y

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9
Q

What does reduced recombination in the Y lead to?

A

An accumulation of male-specific loci on the Y and female-specific loci on the X

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10
Q

So describe the process of sex chromosome differentiation.

A
  1. Sexually antagonistic alleles become linked to sex-determining loci to always end up in the correct sex
  2. Inversions on the Y prevented recombination with the X
  3. Male-specific genes accumulated on the Y as they are guaranteed to end up in a male
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11
Q

There are two main explanations for divergence of the sex chromosomes. What are they?

A
  1. Muller’s Ratchet

2. Hill-Robertson Effect

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12
Q

Explain Muller’s Ratchet in the context of sex chromosome divergence

A

In proto X populations, there was a stochastic loss of mutation-free chromosomes by drift. Those that remain in the population have deleterious mutations. However when these come together during sex, the mutation-free state can be restored.

In proto Y populations, the Y is unable to recombine during sex due to repeated inversions and therefore cannot escape Muller’s Ratchet.

This has led to divergence/increased mutational load on the Y.

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13
Q

Explain Hill-Roberton Effect in the context of sex chromosome divergence

A

Selective sweeps occur whereby alleles favoured by selection pull along alleles linked to it, whether they are good or bad.

As a result genes on the Y that are selected for, like male fitness genes, pull along deleterious mutations. Therefore Y shows mutation accumulation, a steady decay of functional genes and low adaptive evolution.

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14
Q

Who looked at mutation accumulation in D. melanogaster? What did they do/find?

A

Rice, 1994

Chromosome 2 and 3 prevented from recombining.
After 35 generations male fitness was reduced.
Adult male fitness measured by counting the number of males that emerged 2 days post-eclosion

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15
Q

Rice, 1994:

What was the point of preventing chr2 and 3 from recombining?

A

To assess mutation accumulation on a Y, so chr2 and 3 were made to co-segregate ‘as if they were one large, non-recombining Y chromosome’.

Therefore this experiment provides explanation as to why mutation load might accumulate on a Y

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16
Q

What is masculinisation of the Y?

A

When the prevention of recombination favours the accumulation of male-specific genes

17
Q

In the X, selection can purge deleterious mutations and incorporate beneficial mutation. Can this happen in the Y?

A

No, due to inversions

18
Q

What is hemizygosity?

A

Where there is only one copy of the gene present, i.e. X-linked genes in males

19
Q

Zhou and Bachtrog, 2012:

What are Muller elements?

A

The name for fly genomes; they are formed of sets of homologous chromosomal arms

20
Q

Zhou and Bachtrog, 2012:

How are young, secondary sex chromosomes generated from ancient sex chromosomes in flies?

A

When ancient sex chromosomes fuse to autosomes.

21
Q

Zhou and Bachtrog, 2012:

What is the neo-Y?

A

When an ancient Y chromosome fuses to an autosome

22
Q

Zhou and Bachtrog, 2012:

What is the homologue of the neo-Y?

A

The neo-X

23
Q

Zhou and Bachtrog, 2012:

Which Drosophila species harbour 2 fusions that have created sex chromosomes of different ages?

A

D. miranda

24
Q

Zhou and Bachtrog, 2012:

Which element in D. miranda is referred to as the neo-Y?

A

Muller-C element

25
Q

Zhou and Bachtrog, 2012:

When did the neo-Y in D. miranda split?

Is it degenerate yet?

A

~1mya

It is partially degenerate, rendering the neo-X partially hemizygous

26
Q

Zhou and Bachtrog, 2012:

What did the authors do to investigate the neo-Y?

A

Whole-genome wide and transcriptome analyses

27
Q

Zhou and Bachtrog, 2012:

What did the authors find about the neo-Y?

A

The neo-Y shows massive degeneration, male-beneficial genes on the neo-Y are more likely to undergo accelerated protein evolution, and neo-Y genes involve biased expression towards male tissues.

28
Q

Why is the Y chromosome a good place to store male-specific genes?

A

Because they are guaranteed to always end up in a male.