Session 9-Post-translational Processing Of Proteins Flashcards

1
Q

What is post-translational modification?

A

Some proteins need additional processing after translation as some proteins are first non-functional and then become active in the right location

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2
Q

What are the two methods of post-translational modification?

A

Proteolytic cleavage

Chemical/covalent modification

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3
Q

What is proteolytic cleavage?

A

Breaking peptide bonds to remove part of a protein

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4
Q

What is chemical/covalent modification?

A

Addition of functional groups to AA residues

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5
Q

Where are proteins destined for the cytosol synthesised?

A

On free ribosomes

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6
Q

Where are proteins destined for the membrane or secretory pathway synthesised?

A

Ribosomes on RER

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7
Q

What is required for protein sorting? (4)

A
  1. Signal, intrinsic to protein
  2. Receptor that recognises signal and which directs it to the correct membrane
  3. Translocation machinery-to transport protein across membrane
  4. Energy to transfer protein to new place
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8
Q

What is the signal in protein targeting to peroxisomes and where is it present on the protein?

A

-serine-lysine-leucine = SKL
This SKL sequence is present in proteins going to the peroxisome and is called the peroxisome targeting sequence (PTS).
It is present on the C terminus of the protein

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9
Q

What is the receptor that recognises the signal in protein targeting to peroxisomes?

A

PTS receptor Pex5 which recognises SKL and binds to the protein with this sequence.

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10
Q

What is the translocation machinery involved in protein targeting to peroxisomes?

A

13 Pex proteins make up the transport channel across the peroxisomal membrane - pore is produced which allows the protein to pass through the membrane. These proteins bind to Pex5 to form a cargo complex

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11
Q

Where does the energy to transfer the protein in protein targeting to peroxisomes come from?

A

ATP hydrolysis

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12
Q

Which disorder is a result of protein targeting to peroxisomes going wrong and give two examples of this disorder?

A

Peroxisome biogenesis disorder:

  1. Zellweger syndrome
  2. Rhizomelic Chondrodysplasia Punctata
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13
Q

What causes Zellweger syndrome?

A

Mutation in several different Pex proteins-cannot break down fatty acids so they accumulate and cause impairment in neuronal function

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14
Q

What happens in Rhizomelic Chondrodysplasia Punctata?

A

Mutation in Pex7 protein which leads to long bone shortening

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15
Q

What are the two types of secretion from cells?

A

Constitutive secretion

Regulated secretion

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16
Q

What is constitutive secretion?

A

Continuous secretion of extracellular proteins (eg collagen, immunoglobulins, albumin)

17
Q

What is regulated secretion?

A

Controlled secretion-proteins secreted at specific times

18
Q

What do endocrine cells secrete?

A

Hormones

19
Q

What do exocrine cells secrete?

A

Digestive juices

20
Q

What do neurocrine cells secrete?

A

Neurotransmitters

21
Q

What does the pre- part of preproalbumin define?

A

Signal sequence which is removed during processing

22
Q

What does the -pro- part of preproalbumin mean?

A

Partially mature protein

23
Q

What is a signal sequence?

A

N-terminal AA sequence, 5-39 AA in length. There is a central region, rich in hydrophobic residues that are able to form an alpha helix, allowing the protein to cross the lipid bilayer

24
Q

What is a signal recognition particle (SRP)?

A

Composed of 6 proteins and a short piece of RNA, recognises signal peptide and ribosome

25
Q

Describe the synthesis of secretory proteins and their translocation across the ER membrane (5)

A
  1. Starts as free ribosomes
  2. Signal sequence recognised by SRP
  3. Binds to ribosome
  4. Pauses translation
  5. SRP falls off and translation continues
26
Q

What are the functions of the ER? (7)

A
  1. Insertion of proteins into membranes
  2. Specific proteolytic cleavage
  3. Formation of S-S bonds
  4. Proper folding of proteins
  5. Assembly of multisubunit proteins
  6. Hydroxylation of selected Lys and Pro resides for collagen processing
  7. Glycosylation
27
Q

What are the two types of glycosylation?

A

N-linked

O-linked

28
Q

Why is glycosylation of proteins important? (4)

A
  1. Correct protein folding
  2. Protein stability
  3. Facilitates interactions with other molecules
  4. Deficiencies in N-linked glycosylation can lead to severe inherited diseases (congenital disorders of glycosylation or CDG)
29
Q

What happens in N-linked glycosylation?

A

Sugars are added on the asparagine (Asn) side chain, the reaction involves an amino group hence N-linked. This occurs in the ER

30
Q

What happens in O-linked glycosylation?

A

Attachment of sugar to -OH group and occurs in the golgi. The sugar is attached to the hydroxyl group of serine or threonine.

31
Q

What happens if there are folding problems?

A

Protein may be trapped in misfolded conformation

Protein may be incorrectly associated with other sub-units

32
Q

What attempts to correct any issues with protein folding?

A

ER chaperone proteins

33
Q

Give examples of ER chaperone proteins

A

BiP (binding immunoglobulin protein)

Calnexin and calreticulin

34
Q

What do ER chaperone proteins do?

A

Retain unfolded proteins in the ER and act as sensors to monitor the extent of protein mis-folding

35
Q

What happens if mis-folding cannot be corrected?

A

Protein may be returned to cytosol for degradation

36
Q

What happens if there is too much misfolding in proteins?

A

Protein may accumulate to toxic levels in the ER resulting in disease