Section 2: Proteins Flashcards

1
Q

What are atoms composed of?

A

Protons, neutrons, and electrons

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2
Q

What determines the element of an atom?

A

The number of protons

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3
Q

What charge do protons have?

A

Positive charge

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4
Q

What charge do electrons have?

A

Negative charge

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5
Q

What is the charge of neutrons?

A

No charge

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6
Q

What are molecules formed from?

A

Atoms

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7
Q

Define ionic bonds.

A

Chemical bonds formed when one atom transfers electrons to another, creating oppositely charged ions

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8
Q

What happens during the formation of an ionic bond between sodium and fluorine?

A

Sodium transfers an electron to fluorine

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9
Q

What are covalent bonds?

A

Chemical bonds where outer electrons are shared between atoms

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10
Q

What is a single covalent bond?

A

When a pair (2) of electrons are shared

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11
Q

What is a double covalent bond?

A

When two pairs (4) of electrons are shared

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12
Q

How many covalent bonds can carbon form?

A

4

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13
Q

How many covalent bonds can hydrogen form?

A

1

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14
Q

How many covalent bonds can oxygen form?

A

2

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15
Q

How many covalent bonds can nitrogen form?

A

3

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16
Q

What is a nonpolar covalent bond?

A

A covalent bond where electrons are shared evenly

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17
Q

What is a polar covalent bond?

A

A covalent bond where electrons are unequally shared

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18
Q

What does electronegativity determine?

A

Electron sharing behavior

19
Q

Which elements are highly electronegative?

A

Oxygen, Nitrogen, and Chlorine

20
Q

What do the symbols ẟ+ and ẟ- represent?

A

Slightly positive and slightly negative charges

21
Q

What are hydrogen bonds?

A

Weak electrostatic bonds between ẟ+ and ẟ- areas

22
Q

What types of molecules are hydrophilic?

A

Molecules attracted to water and can dissolve in water

23
Q

What types of molecules are hydrophobic?

A

Molecules repelled by water

24
Q

What is an amphiphilic molecule?

A

A molecule with both hydrophilic and hydrophobic parts

25
What are cell membranes primarily composed of?
Phospholipids
26
What are large biological molecules made of?
Polymers made from repeated subunits called monomers
27
What are the monomers and examples of polymers for carbohydrates?
Monomers: sugars; Polymers: glycogen
28
What are the monomers and examples of polymers for lipids and fats?
Monomers: fatty acids; Polymers: phospholipids
29
What are the monomers and examples of polymers for proteins?
Monomers: amino acids; Polymers: enzymes (e.g. salivary amylase)
30
What are the monomers and examples of polymers for nucleic acids?
Monomers: nucleotides; Polymers: DNA, RNA
31
What are the three parts of an amino acid?
Amino group, central carbon (alpha), carboxyl group
32
How can R groups of amino acids be classified?
As nonpolar, polar, positively charged, or negatively charged
33
What process combines two amino acids into a peptide molecule?
Dehydration synthesis
34
What type of bond joins two amino acids in a peptide molecule?
Peptide bond
35
What are the four levels of protein structure?
Primary, secondary, tertiary, and quaternary
36
What characterizes primary protein structure?
The sequence of amino acids joined by peptide bonds
37
What characterizes secondary protein structure?
Interactions between amino acids generate alpha-helix or beta-pleated sheet structures
38
What characterizes tertiary protein structure?
Large bends and folds influenced by R group interactions
39
What characterizes quaternary protein structure?
Two or more folded proteins combine to form a final 3D structure
40
What effect does denaturing have on proteins?
It alters the 3D structure and can affect function
41
What role do enzymes play in living organisms?
They catalyze chemical reactions
42
What is an active site of an enzyme?
The location that binds the substrate
43
What does Vmax represent in enzyme kinetics?
The maximal rate of reaction reached when the curve plateaus
44
What does Vmax/2 represent in enzyme kinetics?
50% of the maximal rate of reaction