Section 2 Flashcards

Structure of eukaryotic genes

1
Q

Exons

A

Protein coding sequence

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2
Q

Introns

A

Non-Protein coding sequence, play role in gene expression regulation and alternation? NOt present in histones. More than 90% of average human gene. INcrease w/ genomic size and complexity

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3
Q

Gene

A

Segment of DNA expressed to yield a functional product: e.i. rRNA, tRNA, polypeptide

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4
Q

During transcription

A

Gene transcribed from DNA template to make long RNA molecule, introns then removed by splicing. Only exons in mRNA

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5
Q

mRNA

A

Has Exons (introns removed during splicing)

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6
Q

3’ and 5’ untranslated regions (UTR’s)

A

Exons that are not translated into proteins

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7
Q

Prokaryotics

A

Don’t contain many introns only in rare genes.

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8
Q

Neated genes

A

proteins enocded by of a larger gene. Gene contained in the INtron of a larger gene. Encode pseudogenes or noncoding RNA’s: e.i. small nucleolar RNA’s/microRNAs

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9
Q

small nucleolar RNA’s

A

Function in ribosomal RNA processing

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10
Q

Intron coding

A

SOme encode proteins or RNAs. Others contain sequences that regulate transcription. First intron sometimes contains transcriptional regulatory sequences in genes. some sequences regulate splicing. Others Allow alternative splicing.

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11
Q

first 5’ UTR exon

A

sometimes contains transcriptional regulatory sequences in genes.

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12
Q

Noncoding RNA’s

A

rRNA’s, tRNA’s, miRNA’s, lncRNA’s. Splicing of pre-mRNA’s. Processing of ribosomal RNA.

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13
Q

RNA interference (RNAi)

A

Experimental tool. mediated by short doble-stranded RNA’s.(miRNA’s) Experimental tool used to block gene expression at translational level.

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14
Q

play key role in protein synthesis

A

play key role in protein synthesis

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15
Q

microRNA’s (miRNA’s)

A

22nucelotides L, found in introns in protein coding genes. Regulate cell prolifiration and survival (too many can cause cancer and <3) COme from longer folded RNA, cleaved by Drosha and Dicer. One strand put in RISC. RISC Targets mRNA’s. Inhibits translation and stimulates RNA degradation

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16
Q

RNA induced silencing complex (RISC)

A

Targets mRNA’s with help of miRNA

17
Q

Long non-coding RNA’s (lncRNA’s)

A

non-coding RNA’s > 200 nucleotides. MAjor regulators of gene expression. X chromosome inactivation, Xist

18
Q

X chromosome inactivation

A

When one of the X chromosomes genes for females gets inactivated for dosage compensation by Xist

19
Q

Xist

A

Blocks transcription

20
Q

Repetitive sequences

A

simple-sequence repeates, DNA transposons,Retrotransposomes (SINE,LINE,retro-virus like elements)

21
Q

simple-sequence repeates

A

tandem arrays of thousands of copies of short sequences: e.i. alpha satellite DNA. Not transcribed, no functional genetic info.

22
Q

Short interspersed elements (SINE’s)

A

100-300bp

23
Q

Long interspersed elements (LINE’s)

A

4-6Kb more common

24
Q

Transposable elements

A

SINE, LINE. capable of moving to diferent parts of DNA. played major role in genome evolution

25
Q

Retrotransposome

A

Transposition mediatied by reverse transcription. ex: SINE is on site—>transcribed RNA—->back DNA by reverse trans in new site. (retrovirus-like elements)

26
Q

DNA transposons

A

Move through genome by being copied and reinserted as DNA sequences

27
Q

Reverse transcriptase

A

Encoded by Retrovirus, retrovirus-like elements, LINE’s,

28
Q

Retrovirus-like elements

A

Retrotransposome, Reverse transcriptase, integrase

29
Q

Gene duplication

A

Caused by duplicatino of a DNA segment oe by reverse transcription

30
Q

pseudogenes

A

inactive gene copies of gene families, inactivated by mutation

31
Q

gene families

A

Distinct members of a group of related genes. that may be transcribed in differet tissues or at different stages of development. Arisen by duplication of ancestral genes.