Regulation of gene expression Flashcards
Phenotype
The observable characteristics of an organism, resulting from interactions between the genotype and environment.
Differentiation
Changing patterns of gene expression as cells become specialised.
Housekeeping genes
Code for common structural proteins and enzymes (eg. histones, RNA polymerase, tubulin, pyruvate kinase) that are expressed by all different cell types.
Cell memory
The ability for a cell to maintain its morphology and pattern of gene expression.
Regulation of gene expression
Control of transcription is the predominant level of regulation of gene expression.
Transcriptional unit
Composed of:
- structural information coding for a protein
- regulatory sequences giving instructions for expression
Promoters
5’ regulatory sequences which control the initiation of transcription.
General transcription factors
Gene-regulatory proteins which recognise and bind to gene promoter sites, where they recruit RNA polymerase. This allows a basal level of transcription.
Enhancers
DNA sequences upstream and downstream of a gene which control the rate of transcription.
Gene-specific transcription factors
Gene-regulatory proteins which recognise and bind to enhancer sites, acting together to activate or repress gene expression.
DNA organisation
DNA is associated with octamers of 8 histone proteins, forming nucleosomes. Nucleosomes coil and condense to form a 30nm fibre of chromatin, which can condense further to form chromosomes.
Alleles
Different versions of the same gene, found on homologous chromosomes.
Chromosomes
Molecules of DNA, each containing 100s of genes. Every cell has 22 pairs of autosomes and 2 sex chromosomes, comprising one maternal and one paternal copy of the 23 chromosomes.
Histone proteins
An octamer is comprised of two H2A, two H2B, two H3 and two H4 histone proteins. They have tails of amino acids which are subject to chemical modifications (eg. acetylation, methylation, phosphorylation) that can act as regulatory information.
Histone modification
Enzyme families modify histone tails depending on environmental factors such as cell metabolism and enzyme inhibitors (eg. diet, drugs). This creates a ‘histone code’; a layer of information overlaying the DNA which is involved in regulating gene expression.