quiz 1 review ( nucleic acids) Flashcards

1
Q

What are nucleic acids?

A

DNA and RNA

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2
Q

What are the building blocks of both DNA and RNA?

A

Nucleotides

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3
Q

What are the components of a nucleotide?

A

Pentose sugar
Nitrogenous base
Phosphate group

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4
Q

What nitrogen bases are found in DNA?

A

Adenine
Guanine
Cytosine
Thymine

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5
Q

What nitrogen bases are found in RNA?

A

Adenine
Guanine
Cytosine
Uracil

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6
Q

What are the basic steps in most molecular assays?

A

Extraction and purification of nucleic acid

Amplification of the target nucleic acid

Detection of the amplified target

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7
Q

How are cloned DNA probes made?

A

Probe is inserted into plasmid vector and placed into bacterium which it replicates.

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8
Q

What can probes be labeled with?

A

Radioactive element

Biotin

Enzyme

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9
Q

High stringency occurs under which conditions?

A

Low salt concentration

High temperature

Presence of a denaturant (formamide)

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10
Q

What is extracted in the Southern Blot method?

A

DNA

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11
Q

How are DNA fragments separated in the Southern Blot method?

A

Gel electrophoresis

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12
Q

Which method is performed on cells, tissues or chromosomes fixed to
a microscope slide?

A

In situ hybridization

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13
Q

Which method evaluates differences in DNA sequences by identifying
different lengths of DNA fragments?

A

Restriction Fragment Length Polymorphism (RFLP)

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14
Q

What is the most common method that uses target amplification?

A

PCR

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15
Q

What are the 3 steps of each PCR cycle?

A

Denaturation

Primer annealing

Primer extension

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16
Q

What is the end product of PCR?

A

Amplicon

17
Q

How are the end products of PCR analyzed

A

Gel electrophoresis

18
Q

What can cause false-positive results in PCR?

A

Contamination from carryover or the environment

19
Q

How can false positives in PCR be prevented

A

Have different rooms or benchtops for each process

Use aerosol-resistant pipette tips

20
Q

What is the name of the enzyme that extends primers on each

template strand in the PCR cycle?

A

Taq polymerase

21
Q

What characteristic does this taq polymerase have?

A

Thermostable

22
Q

Which molecular technique uses signal amplification?

A

Branched DNA assay

23
Q

Which molecular technique uses probe amplification?

A

Ligand chain reaction (LCR)