QF-PCR Aneuploidy Testing Flashcards

1
Q

the gain or loss of a chromosome

A

aneuploidy

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2
Q

define non-disjunction

A

failure of one or more pairs of homologous chromosomes or sister chromatids to separate normally during nuclear division, usually = abnormal distribution of chromosomes in the daughter nuclei

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3
Q

Turner Syndrome

A

Monosomy X; 45,X
- usually paternal non-disjunc
- short stature, webbed neck, low hairline, normal intelligence, loss of ovarian function, cardiac defects and kidney disease

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4
Q

frequency of Turner Syndrome

A

1 in 2500 newborn girls worldwide

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5
Q

Klinefelter syndrome

A

47, XXY
- paternal or maternal non-disj
- tall with long limbs
- small testes, penis, breast growth, decrease sexual interest, lower than ave intelligence

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6
Q

Trisomy X

A

47, XXX
- most common female sex chromosome aneuploidy
- maternal non-disj
- taller than average, developmental delays

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7
Q

XYY syndrome

A

Jacob’s syndrome; 47 XYY
- paternal non-disj or post-zygotic cleavage errors
- tall, enlarged head, anti-social, learning disabilities, usually fertile
- 1 in 1000 live male births

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8
Q

Patau syndrome

A

Trisomy 13; somatic; 47, XX or XY+13
- non disj of either parent
- small eyes, extr digits, cleft palate, hart and CNS defects
- 90% infants die within a year

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9
Q

diagnosis for Patau syndrome

A

quad test
- low free estriol
- low AFP
- low inhibin A
- low B-HCG

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10
Q

central walls of heart not formed

A

Patau

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11
Q

clenched fists

A

Patau

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12
Q

Edwards Syndrome

A

Trisomy 18; 47, XX or XY+18
- maternal non-disj usually
- small, long head, small mouth, underweight, feeding and breathing problems, heart and genitourinary issues
- severe cognitive impairment
- freq increases with maternal age
- 90% infants die within a year

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13
Q

overlapping fingers

A

Edwards

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14
Q

clubfeet

A

Edwards

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15
Q

Downs Syndrome

A

Trisomy 21; 47, XY or XX+21
- majority maternal non-disj
- craniofacial abnormalities, heart defect, childhood leukemia, early-onset Alzheimer’s, mild to moderate cognitive impairment
- freq increases with maternal age

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16
Q

short tandem repeats (STRs) aka

A

microsatellites
- type of variable number tandem repeat (VNTR)

17
Q

define STRs

A

short nucleotide sequences of 2 or 6 nucleotides that repeat multiple times
- ex: D8S1179 = STR on chr 8
- TCTA repeated between 7 and 20 times
- at least 14 alleles for D8S1179

18
Q

what happens after quantitative fluorescence PCR?

A

clean up then capillary electrophoresis

19
Q

this can be used to detect aneuploidy

A

QF-PCR amplification of STR

20
Q

how are QF-PCR products resolved and detected?

A

capillary electrophoresis