Proteins Flashcards
Protein structure
carboxyl group, amino group, hydrogen group, R group
levels of protein structure
primary, secondary, tertiary, quaternary
primary structure of a protein
sequence of amino acids
secondary structure of a protein
alpha helices and beta sheets; stabilized by hydrogen bonds and disulfide bonds
tertiary structure of a protein
3D shape which determines protein function; altered by denaturation
denaturation
affects 3D structure of protein; change in protein function
quaternary structure of a protein
2 or more protein units joined together to form a larger protein
list of essential amino acids
isoleucine, leucine, lysine, methionine, phenylalanine, threonine, tryptophan, valine, histidine
list of nonessential amino acids
alanine, arginine, asparagine, aspartic acid, cysteine, glutamic acid, glutamine, glycine, proline, serine, tyrosine
essential amino acids
cannot be synthesized; bodies can’t make carbon skeleton, cannot attach amino group to skeleton, or are not fast enough to meet needs.
conditionally essential amino acids
amino acids that become essential in certain conditions: infancy, disease, trauma, infection, phenylketonuria, etc.
Protein functions
growth and maintenance of tissues, essential metabolic compounds, transport of nutrients, regulation of water balance, maintenance of pH, defense and detoxification, energy (4 kcal/g)
protein examples
enzymes, hormones, hemoglobin/myoglobin, apoproteins, transferrin/ferritin, antibodies, thrombin/fibrinogen/fibrin, collagen,
complete proteins
food that contains all essential amino acids in sufficient quantities to support growth
first limiting amino acid
essential amino acid in smallest supply in a food in relation to body needs; limits the amount of protein the body can synthesize from this food
protein quality
spectrum of amino acids in food; quality may be more important than quantity in some situations
proteases
enzymes that break down proteins by hydrolysis of the peptide bonds
protein digestion in stomach
HCl denatures protein, increasing access by enzymes; pepsin
pepsin
released in stomach as pepsinogen; release controlled by gastrin; optimum pH 1.6-3.2; activated by HCl
protein digestion in small intestine
partially digested food in duodenum causes release of cholecystokinin, which stimulates release of proteolytic enzymes from pancreas; most secreted as proenzymes and have selective activity; smaller peptides digested further by enzymes secreted by intestinal mucosa
absorption of proteins
occurs by active transport;
protein synthesis
requires adequate amounts of all amino acids; Transcription, Translation; results in primary structure
DNA
instructions for protein synthesis; genetic info located in nucleus of all cells
Transcription
DNA “copied” to mRNA and transferred from nucleus to cytoplasm
Translation
mRNA “decoded” into a polypeptide by ribosome in cytoplasm
tRNA
needed to deliver each amino acid as needed in translational process
amino acid catabolism
deamination to yield C-skeleton and ammonia (NH4); yields 4 kcal/g; fates: glucogenic or ketogenic; nitrogen disposed of
urea cycle overview
disposal of nitrogen waste product from protein metabolism