Protein Based drugs Flashcards
Protein Composition
What type of chain and what is it made up out of?
How many naturally occuring types?
What are 4 ways their chemical makeup varies?
What are the 4 protein structure types?
What are those made up of?
Examples of post-translational modifications and degradation of proteind in vivo
7 things
Protein Stability
Which state is more stable? Unfolded or Folded? Numerically how much more stable?
4 points pertaining to this?
- How many Hydrogen bonds?
- What about small proteins?
- What is only marginally stable?
- Unfolding?
Protein stability refers to?
Protein folding
Driving force based on what sequence?
4 points? Vs. What other point?
- Collapse?
- What interactions?
- What bonding?
- This list is not?
Vs.
- Protein and water? Entropy?
Protein Folding
We say that it cannot be a? What paradox?
What about the timescale of protein folding?
Therefore? 3 points
- What type of folding and what type of intermediates?
- What do solvent interactions do?
- What type of proteins in vivo
Introduction
Recombinant proteins made from different cell lines leading to? AS in what are the 3 types of organisms used for protein things
3 cell types used
Proteins are Sensitive what 4 things are they sensitive to? What makes them not work
Formulation Turning molecules into medicine 4 things
- What do you do for clinical admin?
- What do you need to figure out when the pt is taking it?
- How lng can it last?
- Friendly to who?
Monoclonal antibodies picture
What is the difference between Small Drugs and Large biologics in terms of how they are made up
Monoclonal antibody structure
2 portions?
Important physical characteristics 5
- How heavy?
- How many AAs?
- Domain?
- Sugar?
- Type of molecule?
Dynamic Behavior of Immunoglabulins
What region connects Immunoglubulin fragments? 2 parts of this?
What is between V and C domains?
2 types of motions
Sidechain?
Ven Diagram
Preformulation Characterization:
Determine Degradation Pathways and Physiochemical Stability Profile
4 parts
The end thing in the middle is?
Examples of Protein drug Heterogeneity?
3
Question is what makes the proteins vary non hemogenous
Protein Degradation pathways In Vitro
Chemical Pathways 8
Just know the differences between the two
Physical Pathways 4 and 4 subs in last one
Examples of Chemical Degradation Pathways
5 and examples within those
Examples of Chemical Degradations pathwzys
Protein?
Protein Met Oxidation
Protein Trp oxidation
Physical degradation pathways of protein therapeutics
5 things and these cause what 2 things?
What is the solution to the problem?
Protein Aggregation
Model of Multi state process of Non-Native Protein aggregation
What is the best and most effective form of the protein?
Because of this what do you want to prevent?
The goal is to keep the protein in as mich of the monomer form as possible or to have it readily be reversed back into the monomer so the drug can still be active
Protein Physical Stability and Aggregation
Two general categories:
Two roles