Principles of Cellular Communication & Signal Transduction Flashcards

1
Q

What are receptors?

A

Proteins which are specifically evolved to receive signals carried by molecules

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2
Q

How do cell-surface receptors work?

A

Receptors are present on the plasma membrane of the cell, extra cellular signals do not penetrate plasma membrane

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3
Q

How do intracellular receptors work?

A

Signalling molecules are freely diffusible through the plasma membrane, the receptors for these are located inside the cell

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4
Q

What molecules use intracellular receptors?

A

Small hydrophobic signal molecules and steroid hormones

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5
Q

What is juxtacrine signalling?

A
  • short range signalling
  • ligand is a molecule expressed by one cell surface, and the receptor is expressed by neighbouring cell
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6
Q

What is paracrine signalling?

A
  • middle range signalling used by growth factors
  • signal is produced by one cell which diffuses through organ/tissue
  • signal is received by receptor on other cell
  • cells can use autocrine signalling to signal to themselves
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7
Q

What is endocrine signalling?

A
  • long range signalling used by hormones
  • gland secretes soluble hormone which goes into bloodstream and spreads across the body
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8
Q

What is synaptic signalling?

A
  • synaptic signalling type
  • is juxtacrine so need cells to directly interact
  • cells are neurons and grow long, so is long range like endocrine signalling
  • relies on diffusible signal just like paracrine signalling
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9
Q

What happens during slow cellular responses?

A

Extracellular signal interacts with receptor, signal is taken to the nucleus where gene expression is altered to produce specific RNA, which alters protein synthesis, which alters cytoplasmic machinery, which leads to altered cell behaviour

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10
Q

What happens during fast cellular responses?

A

Extracellular signal interacts with receptor, which uses intracellular signalling pathway to directly alter protein function, which alters cytoplasmic machinery, leading to altered cell behaviour

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11
Q

What is signal transduction?

A

Reversible signal dependent modulation of protein-protein interaction networks in cells

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12
Q

What is allosteric regulation?

A

Protein activity can be changed via signal-dependent modification of the regulatory domain that is distinct from the functional domain

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13
Q

How does allosteric regulation work?

A
  • most signalling proteins are found in the auto-inhibited conformation, where the functional domain is blocked so cannot carry out function
  • input signal interacts with regulatory domain, changing the conformation and allowing function to act
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14
Q

How does cAMP act as an allosteric regulator

A

It binds to the regulatory domain, which hinges to expose and activate Epac

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15
Q

Why proteins carry out and undo phosphorylation?

A

Kinases phosphorylate, phosphatases dephosphorylate

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16
Q

What ways can phosphorylation effect signal transduction?

A

1: changes the charge to be more negative
2: changes the way proteins interact eg. Phosphorylation induces binding
3: can induce allosteric regulation, happens due to conformational change in the phosphorylated protein

17
Q

What are double specificity kinases?

A

Kinases that phosphorylated both Ser/Thr and Tyr

18
Q

What is a pseudosubstrate domain?

A
  • Some kinases have a loose loop which has similar motif to preferable phosphorylation motif
  • can bind to catalytic center but cannot unbind easily as it can’t be phosphorylated
  • kinases are activated by displacement of pseudosubstrate followed by auto phosphorylation
19
Q

What is the SH2 domain?

A

Most common eukaryotic domain which recognises phosphorylated tyrosine

20
Q

What is the SH3 domain?

A
  • Does not recognise phosphorylation
  • Binds to a motif of pxxp (2 prolines separated by other amino acids)
21
Q

PH domain

A

Domain that recognises highly negatively charged phosphonositide lipids

22
Q

What are adaptor proteins?

A

Protein which bridges 2 other proteins

23
Q

What are scaffold proteins?

A

Proteins which have more than 2 protein-protein interaction domains