Pharmacogenomics Flashcards

1
Q

What is pharmacogenomics

A

The study of how genetic differences between patients account for differences in their responses to a drug

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2
Q

What are most variations due to

A

Single nucleotide polymorphisms

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3
Q

What is an allele

A

variant of a gene
1 allele from each parent which can be homozygous or heterozygous

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4
Q

What does CYP450 do

A

metabolises drugs and either activates of inactivates them

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5
Q

What are 3 types of metabolisers

A
  • poor metabolizers
  • intermediate metabolizers
  • extensive metabolizers
  • ultra rapid metabolisers
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6
Q

Why is pharmacogenomics important

A

to reduce the number of ADR so the right dose is selected for the right patient

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7
Q

What other factors affect ADRs

A
  • age
  • other drugs
  • food intake
  • environment
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8
Q

What are 5 benefits of personalised prescribing

A
  • increase efficacy
  • decrease toxicity
  • increase compliance
  • dose guidance - this depends on the extensiveness of the metaboliser
  • efficient choice of medication and dose rather than trial and error
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9
Q

What type of drug is abacavir (HLA-B*57:01) and what disease is it used for?

A

antiretroviral used for HIV - it inhibits HIV replication

nucleoside reverse transcriptase inhibitor

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10
Q

What allele is abacavir hypersensitivity syndrome associated with?

A

HLA-B*57:01

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11
Q

If a patient is screened for HIV, what else do they need to be screened for?

A

HLA-B*57:01 allele

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12
Q

What is carbamazepine used for

A
  • epilepsy
  • bipolar affective disorder
  • trigeminal neuralgia
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13
Q

Carbamazepine can induce Steven Johnson syndrome and toxic epidermal necrolysis, what allele causes this

A

HLA-B*15:02

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14
Q

What allele associated with carbamazepine is highly prevalent in southeast asia

A

HLA-B*15:02

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15
Q

Other than carbamazepine, Which other drugs had HLA-B*15:02 been linked to STS-TEN

A
  • oxcarbazepine
  • phenytoin
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16
Q

In northern Europe, which allele has been associated with hypersensitivity reactions such a maculopapular rash

A

HLA-A*31:01

17
Q

What are Fluoropyrimidines

A

antimetabolite chemotherapy drugs for specific cancers

18
Q

What cancers do Fluoropyrimidines treat

A
  • gastrointestinal
  • breast
  • head and neck
19
Q

What type of drug is 5-FU, is it inactive or active?

A

Fluoropyrimidine

20
Q

What type of drug is Capecitabine and Tegafur

A

pro drugs
fluoropyrimidines
inactive, they are converted into the active form 5-FU

21
Q

What serious adverse reactions occur with fluoropyrimidines

A

gastrointestinal

22
Q

What enzyme activates 5-FU

23
Q

What is the gene that encodes for the DPD enzyme

24
Q

Patient X is a poor metaboliser of DPD, if they are given a fluoropyrimidine for breast cancer, what could happen

A

Drug toxicity - can’t metabolise the drug and clear it
5-FU related ADR (gastrointestinal)

25
If someone has a head and neck cancer, breast cancer or gastrointestinal cancer and is being considered for fluoropyrimidine treatment, what must they be screened for
DPYD genetic variant
26
What type of drug is gentamicin
aminoglycoside antibiotic
27
What are common side effects of gentamicin
sensorineural hearing loss renal failure (nephrotoxicity)
28
What gene causes irreversible sensorineural hearing loss if given an aminoglycoside antibiotic
RNR1
29
What 3 RNR1 variants can cause hearing loss
- m.1555A>G - m.1095T>C - m.1494C>T
30
What gene do newborns now get screened for before being given aminoglycoside antibiotics such a gentamicin
RNR1
31
What type of drug is Codeine
analgesic drug for mild to moderate pain antidiarrhoeal
32
Codeine is a prodrug, what enzyme is it metabolised by
CYP2D6 to active morphine
33
If you are a poor metaboliser of CYP2D6 will you experience analgesic effects
No as it is not converted into the active metabolite due to the genetic variance in CYP2D6 enzyme
33
If you are a poor metabolizer of CYP2D6 will you experience analgesic effects
No as it is not converted into the active metabolite due to the genetic variance in CYP2D6 enzyme
34
What type of drug is clopidogrel
Prodrug antiplatelet drug for ACS, PCI, MI, AIS P2Y12 receptor antagonist
35
What enzyme converts inactive clopidogrel into its active metabolites
CYP2C19
36
If you are a poor metabolizer of CYP2C19 will you experience antiplatelet effects
No as it is not converted into the active metabolite