Pharmacogenetics and Multifactorial inheritance Flashcards
Phenocopy
environmentally caused phenotype that mimics genetic version of the trait
-ie: thalidomide - induced limb malformation vs genetically induced
locus heterogeneity
same/similar disease caused by mut in alleles at diff locations in 1 gene or many genes
higher concordance rates indicates what?
genetic variation contributes to variation in risk more than variation in non genetic factors
higher coorelation among MZ and DZ twins for a quantitative trait suggests what?
genetic variation is relatively more important than variation in non genetic factors
(these sib more likely to both get disease)
Heritability estimates describe what?
Both genetic and non genetic factors adding variance in a trait.
high heritability indicates what?
diff among indiv with trait largely attributed to diff in genetic makeup.
CYP3A
substrates?
inhibitor?
inducers?
substrates:
cyclosporin (immunosuppresant agent)
Inhibitor:
Ketoconazole (antifungal agent)
grapefruit juice
Inducers:
rifampin
CYP2D6
substrates?
Inhibitors?
substrates:
tricyclic antidipressants
codein (activator)
Inhibitor:
quinidine
fluoxethine
paroxetine
CYP2C9
Substrate?
Warfarin
NAT
Substrate?
Isoniazid (for TB treatment)
VKORC1
Inhibitor?
Warfarin
TPMT
6-mercaptopurine
6-thioguanine
G6PD
Sulfonamide
Dapsone
(indiv who are G6PD deficient are susceptible to hemolytic anemia)
Pharmacokinetics
(removal/movement of drugs)
-rate at qhich body absorbs, distributes, metabolize, or excretes drugs (ADME)
Pharmacodynamics
(effect)
observed biological effect of drug
phase I
pharmacokinetic
- attach polar group to compound to make it more soluble (usually hydroxylation) -> elimination
phase II
pharmacokinetic
-attach a sugar acetyl group to detoxify drug -> eliminate
cytochrome P450 (CYP450)
- (very)general function
- how many families?
- good detoxifying enzymes - inactivate drugs
- 3 main families: CYP1, CYP2, CYP3
What would result if there was a ____ mutation on the CYP2D6 gene?
- Frameshift
- SPlicing defect
- Missense
- Copy number allele
- Frameshift: alter reading frame - NO ACTIVITY
- SPlicing defect: skip exons/alter reading frame - NO ACTIVITY
- Missense: alter protein function - REDUCED ACTIVITY
- Copy number allele: increase gene copy alleles - INCREASED
Incomplete penetrance
not everyone with predisposing gene variant develops disease
-ie type I diabetes
Variable expressivity
no people with same genetic variant have exact same disease characteristics
2 types of heterogeneity
same similar diseases can be caused by:
- allelic: diff mutation at same allele
- locus: mutation of alleles at diff locations