Patterns of single gene inheritance: overview Flashcards
Single gene/Mendelian disorders
single defective allele at a locus, characteristic pedigree, mostly pediatric
Locus
gene location on a chromosome
alleles
paired genes at a locus
wild type allele
normal version of the gene
mutant allele
differs from wild type (WT) allele may cause disease
polymorphism
two or more normal alleles at a locus
genotype
genetic make up of an individual
phenotype
the expression of a genotype
homozygous
identical alleles at a given locus
heterozygous
two different alleles at a given locus
compound heterozygote
2 different mutant alleles at a given locus
Dominant
expressed in heterozygotes
Co-dominant
both alleles of a pair are expressed
incomplete dominance
phenotype due to heterozygous phenotype is diff from both homozygous genotypes and severity is intermediate between them
Recessive
a trait or a gene is recessive if it is NOT phenotypically expressed in heterozygotes
autosome
22 pairs in human karyotype
X-linkage
genes on X chromosome; traits determined by such genes are X-linked
4 types of single gene inheritance
Autosomal:AD,AR X-Linked: Dominant, recessive
pedigree
a diagram of an extended family, indicating their relationship to the pro band, and their status with respect to a particular hereditary condition
Proband/Propositus/Index Case
the affected family member through whom the family is brought to attention
Pedigree: Consultand
person who brings family to attention by consulting a geneticist
Pedigree:Sibs
brothers and sisters; entirety of siblings-sibship
Pedigree: Kindred
entire family
Pedigree:Relatives- 1st degree
parents, sibs, offspring of proband
Pedigree: 2nd degree
grandparents, grandchildren, uncles, aunts, nephews, nieces, half sibs
Pedigree: 3rd degree
first cousins
consanguineous
couples who have one or more common ancestors
Isolated case
if there is only one affected member in a family
Sporadic case
disease determined to occur due to a new mutation
Factors affecting pedigree patterns
characteristic in AD, but not restricted to them.
2 distinct differences in expression.
Reduced penetrance
Variable expressivity
Penetrance
probability that a gene will have phenotypic expression
Reduced penetrance
When frequency of expression is less than 100%
ie gene is present, but clinical features are absent: lobster claw formation skipping of generation
Expressivity
severity of expression of phenotype
variable expressivity
severity of disease differs in ppl who have same genotype-Neurofibromatosis (NF1)
Neurofibromatosis (NF1)
neurofibromas-multiple fleshy tumors in skin.
Cafe-au-lait-multiple flat, irregular pigmented spots
Lisch nodules-benign hamartomas on iris of eye.
Less freq-mental retardation, CNS tumors, diffuse plexiform neurofibromas and cancer of nervous system or muscle
NF1 gene
17 at q11.2
Neurofibromin is a cytoplasmic protein predom expressed in neurons, schwann cells, oligos, astros, leukocytes.
signaling pathways and assoc to microtubules
NF1
penetrance 100%, age dependent, VARIABLE EXPRESSIVITY.\
factors affecting pedigree patterns
age of onset-depends on disease not all are congenital prenatally lethal small family size new mutations absent/variable expression other genes and environmental factors accurate info lacking
Heterogeneity
Phenotypes that are similar but are actually determined by diff genotypes
allelic, locus, and phenotypic heterogeneity
Locus heterogeneity
mutations at different loci, may be AR,AD, or X-linked. RETINITIS PIGMENTOSA, EHLERS-DANLOS SYNDROME
Retinitis pigmentosa
currently 3 X-linked, 12 AD and 5 AR forms
Ehlers-Danlos Syndrome
More than 10 different loci associated
Allelic hetergeneity
Different mutations at same locus. Cystic fibrosis-mutation in CFTR gene
- severe w/pancreatic insufficiency
- mild w/ pacreatic sufficiency
Phenotypic heterogeneity
Different mutations in same gene give rise to strikingly different phenotypes. Ex: mutations in RET gene,
Phenotypic heterogeneity examples
mutations in RET gene:
loss of function->Hirschsprung disease, failure of colonic ganglia development: defective colonic motility, severe constipation
Point mutations->activate Tyrosine Kinase->multiple endocrine neoplasia type II
Punnett Square
allelic combinations of the gametes->determine genotypes and phenotypic ratio.