Part 2: RNA Viruses Flashcards
This virus include 29 spherical, enveloped RNA viruses that have T-shaped glycoprotein spikes, irregular shaped capsid containing two segment, single stranded RNA genome
Arenavirus
Arenavirus usually infects
Rodents (Bats)
MOT of arena virus: Human transmission
Inhalation of aerosols of infected rodent excrement (ie. urine, saliva, feces, nasal secretions) or direct contact with infected rodents
Arenaviruses capable of causing disease in humans
Lymphocytic choriomeningitis virus (LCMV) and Lassa Fever virus
Arenavirus that has been identified in cases of aseptic meningitis in Europe and the Americas.
LCMV
Arenavirus that has been associated with influenza-like disease to hemorrhagic fever, shock, and death
Lassa Fever virus
This virus is an RNA virus consisting of three single-stranded RNA segments enclosed in a helical nucleocapsid that is surrounded by a lipid envelope.
Bunyavirus
MOT of Bunyavirus
Rodent-borne and transmitted through exposure (inhalation) to aerosolized rodent excreta
The disease associated with Bunyavirus
Hantavirus pulmonary syndrome (HPS)
New virus (bunyavirus) is called?
but later changed into
Muerto Canyon virus changed to Sin Nombre (no name) virus
Primary host of Sin Nomber Virus
Deer Mouse (Peromyscus maniculatus)
This hantavirus is carried by the rice rat (Oryzomys palustris), was first discovered in a male from the state of Louisiana.
Bayou virus
The carrier of of Black Creek Canal virus
Cotton rat (Sigmodon hispidus)
The carrier implicated in a case of a hantavirus infection called the New York-1 virus.
White-footed mouse (Peromyscus leucopus)
Lab diagnosis of Hantavirus relies on
Hantavirus-specific IgM or IgG antibody
Small (30-38 nm), rounded, nonenveloped, single-stranded, positive RNA viruses that cause acute gastro- enteritis in humans
Calicivirus
The virus causes respiratory disease in cats, a vesicular disease in swine, and a hemorrhagic disease in rabbits.
Calicivirus
MOT of Calicivirus
Fecal-oral
Members of Human Calicivirus that primary causes viral gastroenteritis
Norovirus and Sapovirus
Most widely used identification of Norovirus
RT-PCR
Pleomorphic, roughly spherical, medium- sized, enveloped RNA viruses, helical capsid with crownlike surface projections
Coronavirus
MOT of Coronavirus
Unknown, probably direct contact or aerosol
Disease associated with Coronavirus
Common cold; possibly gastroenteritis, especially in children; SARS
Useful in confirmatory testing with antigen- or nucleic acid-based methods
Modified cell cultures
Considered the most pathogenic of the hemorrhagic fever viruses.
Filoviridae family
The term filo means (referring to the virus’s long, filamentous structural morphology)
Threadlike
Pleomorphic, enveloped, nonsegmented, single-stranded, negative sense RNA viruses. Filamentous morphology appears number 6, U or circular in EM
Filoviruses
This filovirus displays the characteristic “shepherd’s hook” morphology.
Marburg hemorrhagic fever virus
The term used to describe a severe multisystem syndrome in which multiple organ systems are affected throughout the body.
Viral hemorrhagic fever
MOT of Filovirus
Human-to-human transmission via body fluids and respiratory droplets
Disease associated with Filovirus
Severe hemorrhage and liver necrosis; mortality as high as 90%
The first filovirus was detected in Marburg, Germany after handling an imported
African Green Monkey (Tissue)
The other filovirus that was named after a rive in Zaire (Republic of Congo)
Ebola Virus
For diagnosis of Filovirus, we must use
Electron microscopy, cell culture in monkey kidney cells; Biosafety Level 4 required
Single-stranded ribonucleic acid (RNA) genome surrounded by spherical and icosahedral capsid with envelope. Derived from the Latin word “yellow”
Flavivirus
MOT of Arboviruses under Flavivirus (Ie. Yellow fever, dengue, West Nile, Japanese and St. Louis encephalitis)
Arthropod vector, usually mosquito
This Arbovirus (flavivirus) primarily infects liver cells, resulting in fever, jaundice, and hemorrhage
Yellow fever virus
This Arbovirus (flavivirus) is associated with outbreak in Brazil led to reports of Guillain-Barre syndrome and pregnant women giving birth to babies with birth defects and poor pregnancy outcomes.
Zika virus
The most prevalent arbovirus (flavivirus) in the world; more than 100 million people are infected annually. It is the leading cause of illness and death in the tropics and subtropics.
Dengue virus
T/F: There is no dengue vaccine available
True *accd. to Bailey’s
This flavivirus is maintained in a bird-mosquito cycle. Birds are the natural reservoir for the virus.
West Nile Virus
T/F: West Nile virus also has been transmitted person to person through blood transfusions, tissue transplantation, and via human breast milk
True
The flavivirus that causes hepatitis (inflammation of the liver)
Hepatitis C virus
Previously classified in the family of caliciviruses, small, nonenveloped virus with a single-stranded RNA genome
Hepevirus
MOT of Hepatitis E (Hepevirus)
Fecal-oral
T/F: HEV was discovered in Asia by a Russian virologist who volunteered to drink stool filtrates from a patient with an unidentified form of hepatitis. The virus is waterborne.
True
With HEV infections, this demonstrates increased levels
Serum bilirubin, Aspartate aminotransferase (AST), Alanine aminotransferase (ALT), IgM and IgG antibodies
Method recommended to confirm positive serology results in areas where HEV is not endemic.
Nucleic acid testing
Segmented (eight separate molecules), single-stranded, ribonucleic acid (RNA) genome; helical capsid with envelope
Orthomyxovirus
Influenza virus A, influenza virus B, and influenza virus C can be distinguished based on the antigenic differences in
Matrix protein (M) and the nucleoprotein (NP)
Influenza A is subdivided based on what major surface glycoproteins?
Hemagglutinin (HA) and Neuraminidase (NA)
Glycoprotein that has rod-shaped spikes that enable viral attachment to sialic acid–containing cellular receptors that can initiate infection
HA Protein
Glycoprotein that has mushroom-shaped spikes. They facilitate the release of mature virions from infected cells and assist in viral movement through mucus to adjacent cells.
NA Protein
The influenza virus naturally infects many bird species, swine, seals, felines, and horses
Influenza A
MOT of Influenza A
Contact with respiratory secretions
It is a continuous, gradual form of change in the viral genome during replication. Occurs in all viral influenza types
Antigenic Drift
It is a more dramatic change in the viral genome and only occurs with influenza A viruses, causes periodic worldwide outbreaks
Antigenic Shift
Similar to “mild” influenza
Influenza B
The mild form of influenza causing URTIs
Influenza C
Strain of Influenza referred to as the bird flu/avian virus
H5N1 influenza virus
T/F: Bacterial coinfections are common with influenza, possibly because of viral NA-induced changes in the respiratory epithelium that allow increased bacterial adherence or decreased mucociliary clearance. (ie. MRSA)
True
Samples for influenza may be stored in?
4°C for up to 5 day
Do not have a segmented genome, as do the orthomyxoviruses, and therefore do not undergo antigenic shift. they are spherical, enveloped RNA virus
Paramyxovirus
The most common cause of croup
Parainfluenza 1
MOT of Paramyxovirus
inoculation of mucous membranes of the respiratory tract with infectious secretions transmitted on fomites or as large, droplet aerosols.
It is an acute, self-limiting disease characterized by parotitis (inflamed salivary gland) accompanied by a high temperature (fever) and fatigue.
Mumps
MOT of Mumps virus
Person-to-person contact, presumably respiratory droplets
One of six classic childhood diseases capable of causing a rash or skin eruption (exanthem)
Measles
MOT of measles virus
Contact with respiratory secretions; extremely contagious
The hallmark rash of measles infection characterized by bluish white spots with red halo located on the buccal or labial mucosa is referred to as
Koplik spots
Is a newly discovered virus closely related to RSV. Associated with winter epidemics
Metapneumovirus
MOT of Metapneumovirus
Person to person
Is a recently discovered paramyxovirus capable of causing respiratory disease in pigs and acute, febrile encephalitis in humans.
Nipah virus
Small, nonenveloped, single-stranded RNA virus. Simplest among the RNA virus and has limited surface elaboration
Picornavirus
Picornvirus that are responsible for a variety of diseases and conditions, including aseptic meningitis, paralytic poliomyelitis, and encephalitis, in addition to respiratory illness, myocarditis, and pericarditis.
Enterovirus
MOT of Picorvirus
Fecal-oral
Virus associated with an acute, flaccid (relaxed, “rag doll”) paralysis that affected their ability to breathe.
Polio enterovirus
This drug commonly was administered as a sugar cube coated with the vaccine
Sabin oral live attenuated vaccine
Enterovirus diagnosis is confirmed using
Panenterovirus IFA
The cause of the common cold. Its name re- flects the fact that the primary infection and replication site is the epithelial cells in the nose.
Rhinovirus
Another member of the picornaviruses, causes an infectious nonchronic hepatitis.
Hepatitis A virus
Hepa A virus is usually transmitted thru
Contaminated food or water or household contact with an infected person. Sharing of contaminated needle
First isolated from respiratory and enteric specimens. Segmented, double-stranded, ribonucleic acid (RNA) genome; icosahedral capsid with no envelope
Reovirus
MOT of Reovirus
Fecal-oral; survives well on inanimate objects
Common human pathogens of this Reovirus family include
Rotavirus and the agent of Colorado tick fever
Reovirus that is recognized as the major causative agent of infantile severe gastroenteritis throughout the world. Worldwide
Rotavirus
Constitutes a large group of viruses that primarily infect vertebrates. Virus that has single-stranded, ribonucleic acid (RNA) genome; icosahedral capsid with envelope; reverse transcriptase converts genomic RNA into deoxyribonucleic acid (DNA)
Retrovirus
Site of Latency for HIV 1 and HIV 2
CD4 T Lymphocytes
MOT of HIVs
Sexual contact, blood exposure, perinatal exposure
Virus that infects plants, arthropods, fish, and mammals. Has single-stranded, ribonucleic acid (RNA) genome; helical capsid with envelope, bullet-shaped
Rhabdovirus
MOT of Rhabdovirus (Rabies)
Bite of rabid animal
The Family of virus which Includes rubella virus and the alpha viruses, a large group of mosquito- borne arboviruses. Single-stranded ribonucleic acid (RNA) genome and icosahedral capsid with envelope
Togavirus
MOT of Togavirus
Direct contact with nasopharyngeal secretions or by congenital transmission
“German measles,” is usually a benign disease characterized by fever and rash caused by?
Rubella virus
Causes Eastern, Western, and Venezuelan equine encephalitis
Alphavirus
MOT of Alphavirus
Arthropod vector (Mosquito)
A potential agents of hepatitis, transfusion-transmitted virus (TTV), and hepatitis G virus (HGV).
Astrovirus