Part 1 Viva Flashcards

1
Q

Causes of respiratory alkalosis

A

Hypoxia - altitude, anaemia, R-L shunts
Drugs – salicylate, catecholamines etc.
Pulmonary – pneumothorax, haemothorax, pulmonary oedema, pulmonary embolism, aspiration, COPD
Endocrine – pregnancy, hyperthyroidism
CNS – pain, hyperventilation, anxiety, fever, trauma, tumour, meningitis etc.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Causes of a low urea

A

Hepatobiliary disease due to dec synthesis – acute liver failure, alcohol abuse
Overhydration
Starvation
SIADH

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Causes of a high urea

A

High protein diet
Increased protein catabolism
Dehydration
Renal dysfunction
Shock
Haemorrhage
GI bleed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Causes of hypokalaemia

A

Inadequate intake - alcoholic, anorexia etc.
Transcellular shift - insulin, ventolin, periodic paralysis etc.
Renal loss - diuretics, vomiting, RTA, Bartter’s syndrome etc.
Extra-renal loss - diarrhoea, laxitives, cancer etc.
Misc – Mg depletion etc.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Further investigation of hypokalaemia

A

Urine [K], [Cl], plasma [HCO3-], aldo:renin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Bartter syndrome lab findings

A

Hypokalemic alkalosis
Hypercalciuria/nephrocalcinosis
Increased levels of plasma renin and aldosterone

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Biochemical investigation of hyperammonaemia

A

Mild - exclude artefactual increase and repeat
Exclude heaptic causes (LFTs)
U&E, glucose, Ca, lactate, urine ketones, INR, ABG
Plasma amino acids, urine amino acids, organic acids, orotate, plasma acylcarnitines

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Gitelman syndrome lab findings

A

Hypokalaemic metabolic alkalosis in combination with significant hypomagnesaemia and low urinary calcium excretion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Biochemical investigation of a patient with renal calculi

A

Single calcium calculus - serum calcium, ionised calcium, and PTH
Recurrent - MC&S, pH, 24 h urinary calcium, phosphate, urate, oxalate, citrate, cystine, creatinine
Stone analysis for components (Fourier Transform InfraRed Spectroscopy)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Causes of low magnesiumm

A
  1. Low albumin – biologically active serum Mg is normal
  2. Electrolyte loss
    - GI (malabsorption, diarrhoea, short bowel)
    - renal tubular disease, e.g. chronic pyelonephritis, glomerulonephritis, recovery from acute tubular necrosis, post-transplantation
  3. Poor intake - inadequate parenteral nutrition, malabsorption, starvation
  4. Drugs - thiazides, loop diuretics, aminoglycosides, amphotericin B, cytotoxics, cyclosporine, pentamidine, laxative abuse, proton pump inhibitors, e.g. omeprazole (rare)
  5. Alcoholism - common (1/3), multiple causes: diet, diarrhoea, renal tubular losses
  6. Endocrine - hyperthyroidism, hyperparathyroidism, poorly controlled diabetes (osmotic diuresis), hyperaldosteronism, SIADH
  7. Redistribution - alkalosis, correction of acidosis, severe stress, ‘hungry bone’ syndrome after parathyroid surgery
  8. Chelation - acute pancreatitis, post-transfusion, foscarnet therapy
  9. Genetic causes - Bartter, Gitelman syndromes
  10. Late pregnancy - combination of low albumin and respiratory alkalosis
  11. High fat diet - up to 10% of patients (mechanism unclear)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Causes of hypoglycaemia in an infant/newborn

A
  1. Idiopathic ketotic hypoglycaemia
  2. Hormonal abnormalities
    Insulin excess (non-ketotic)
    Counter-regulatory hormone deficiency (ketotic)
    eg deficiency of growth hormone or cortisol
  3. Hepatic enzyme deficiencies (ketotic), eg
    o Involving glycogen breakdown or synthesis - Glucose-6-phosphatase deficiency, Debrancher deficiency, etc
    o Involving gluconeogenesis - Fructose-1,6-diphosphatase deficiency, etc
  4. Other enzyme deficiencies, eg
    o Fatty acid oxidation defects (non-ketotic – but not all cases)
    o Congenital disorders of glycosylation (phosphomannose isomerase deficiency)
  5. Reaction to drugs or toxins
  6. Secondary to other systemic disease
    Liver failure
    Gastroenteritis
    CNS disorders
    Reye’s syndrome, etc
  7. Iatrogenic – following fundoplication, with gastric tube feeding
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Investigation of neonatal hypoglycaemia

A

o Glucose
o Insulin
o Cortisol
o Growth hormone
o Plasma β-hydroxybutyrate and free fatty acids
o Lactate
o Acylcarnitines (elevated in fatty acid oxidation defects)
o Urine metabolic profile (looking for abnormal patterns of organic acid excretion which may be seen in fatty acid oxidation defects, etc)
o Urine drug screen
o Ammonia (rare possibility of the hyperammonaemia, hypoglycaemia syndrome – activating mutation in glutamate dehydrogenase)
o Other tests – electrolytes and acid-base studies

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What substances within the RBC cause interference by haemolysis?

A

Hb
AST
K
Mg
LDH
Phosphate
Adenylate kinase
Proteases

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Rule of thumb: resp compensation for met acidosis?

A

Winter’s formula: pCO2 = 1.5HCO3 + 8 (+/-2)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Rule of thumb: resp compensation for met alkalosis?

A

For every 10 mmol/L increase in HCO3, pCO2 should increase by 7 mmHg (by 24 hours)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Expected changes in acute diarrhoea

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Expected changes in chronic diarrhoea

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Rule of thumb: compensation for acute respiratory acidosis

A

Every 10mmHg rise in pCO2, 1mmol/L rise in HCO3

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Rule of thumb: compensation for chronic resp acidosis

A

Every 10mmHg rise in pCO2, 3.5 mmol/L rise in HCO3

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Rule of thumb: compensation for acute respiratory alkalosis

A

Every 10mmHg fall in pCO2, 2 mmol/L fall in HCO3

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Rule of thumb: compensation for chronic respiratory alkalosis

A

Every 10mmHg fall in pCO2, 5 mmol/L fall in HCO3

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Diagnostic test for protein losing enteropathy

A

Faecal alpha-1-AT - spot or 24hr clearance
(why - A1AT shows minimal degradation and secretion by GIT, and has similar MW to albumin)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Calculation of 24hr clearance A1AT?

A

(stool vol x stool [A1AT])/serum [A1AT]

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

Causes of protein-losing enteropathy

A

Non GI vs GI
NonGI causes (Lymphatic obstruction vs Cardiac):
Lymphangiectasia
Portal hypertension
Fontan procedure (for univentricular heart)
Congenital heart disease
Congestive heart failure esp RHF
Pericarditis

GI causes (Erosive vs Non-erosive)
Erosive:
IBD primarily Crohn’s
NSAID abuse
Gut malignancy
GVHD
Sarcoidosis
Non-erosive:
Amyloidosis
Collagenous colitis
Sprue
Eosinophilc gastroenteritis
Lupus and ANCA vasculitis, Sjogrens

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Causes of increased faecal A1AT
1. Protein losing enteropathy 2. GI bleeding 3. Diarrhoea (obligate loss)
26
Gold standard test for protein losing enteropathy
Technetium-99m labelled human serum albumin scintigraphy
27
Causes of low faecal A1AT
Acid degradation (eg Zollinger-Ellison - use PPI)
28
Causes of distal RTA
Autoimmune diseases are the commonest cause in adults: Systemic lupus erythematosus (SLE), Sjogren syndrome, rheumatoid arthritis, systemic sclerosis, thyroiditis, hepatitis, primary biliary cirrhosis [2]. Drugs: Lithium, amphotericin B, NSAIDs, lead, antivirals, glue sniffing (toluene inhalation in recreational drug abuse) Inherited, AD or AR: Genetic primary causes of distal RTA include mutations of genes that encode the chloride-bicarbonate exchanger (AE1) or subunits of the H-ATPase pump respectively Genetic associations: Marfan syndrome, Ehler Danlos syndrome, sickle cell disease, congenital obstruction of the urinary tract Nephrocalcinosis: Chronic hypercalcemia/familial hypercalciuria, medullary sponge kidney Tubulointerstitial diseases: chronic pyelonephritis, chronic interstitial nephritis, obstructive uropathy, renal transplant rejection Hypergammaglobulinemic states: Monoclonal gammopathy, multiple myeloma, amyloidosis, cryoglobulinemia, chronic liver disease
29
Causes of a proximal RTA
Hypergammaglobulinemic states: Most common cause in adults-monoclonal gammopathy (light chain), multiple myeloma, amyloidosis Miscellaneous: Interstitial nephritis, Fanconi syndrome, vitamin D deficiency, secondary hyperparathyroidism, chronic hepatitis, idiopathic Drugs: Lead or other heavy metals, carbonic anhydrase inhibitors (e.g., acetazolamide, topiramate) [4], out of date tetracyclines, aminoglycosides, valproate, mercury, tenofovir, and ifosfamide (nephrotoxic) Autoimmune: Sjogren syndrome, systemic lupus erythematosus (SLE) Inherited: AD or AR putative mutations in Na-H antiporter in apical membrane and Na-HCO3 cotransporter in the basolateral membrane of proximal tubular cells respectively
30
If ferritin is increased due to inflammation, what other test for iron deficiency can be done?
Soluble transferrin receptor 1
31
What is pyroglutamic acid (5-oxoproline)?
A glutathione precursor. Produced from gamma-glutamyl cysteine by gamma-glutamyl cyclotransferase. Gamma-glutamyl cyclotransferase activity is induced by glutathione depletion - in states of ongoing glutathione depletion, especially if glutathione synthase is inhibited (catalyses gamma-glutamyl cysteine conversion to glutathione), pyroglutamic acid can accumulate.
32
Risk factors for pyroglutamic acidosis
Elderly Paracetamol use (glutathione depletion by its metabolite NAPQI) Sepsis (depletion of glutathione) Flucloxacillin (inhibits 5-oxoprolinase) Hepatic and renal impairment Malnutrition Pregnancy Vigabatrin (antiepileptic drug) Congenital enzyme deficiencies (glutathione synthase deficiency)
33
Causes of increased homocysteine
Renal impairment Hypothyroidism Folate, vitamin B12, and B6 deficiency Drugs (alcohol)
34
Expected pattern of B12/folate results in nitrous oxide poisoning?
Normal concentrations total and active B12, increased functional B12 assays (MMA, homocysteine). Functional moieties of B12 - methyl- and adenosylcobalamin replaced by nitrosylcobalamin, impairing it's ability to convert MMA and homocysteine.
35
Causes of a discordant low total B12 and normal/increased active B12
Pregnancy (dilutional/reduced haptocorrin) COCP (same mechanism as pregnancy) HIV Myeloma Severe folate deficiency
36
What is your lab's insulin method?
2 site chemiluminescent immunoassay
37
Interferences with insulin immunoassay?
Insulin autoantibodies Heterophile antibodies
38
Interferences with free thyroid hormone assays?
Anti-thyroid hormone antibodies Heterophile antibodies Biotin
39
Definition of neonatal hypoglycaemia
glucose < 2.6mmol/L
40
Definition of persistent neonatal hypoglycaemia
hypoglycaemia that continues for longer than or starts after 48 hours
41
Further investigations for neonatal hypoglycaemia
Insulin, GH, cortisol C-peptide Ketones, Lactate Ammonia Amino acids Free fatty acids Urine - ketones, glucose, reducing sugars, urine amino acids, organic acids and acylglycines (urine metabolic screen), drug screen (if suspect exogenous insulin/OHAs)
42
Causes of neonatal hypoglycaemia
1. Hyperinsulinism - Transient: prem, IUGR, birth asphyxia, maternal PET/DM, intrapartum glucose infusion - Persistent: Beckwith-Wiedemann syndrome, defects in regulation of insulin secretion 2. Inadequate glycogenolysis/GNG - Transient: LBW, SGA, sepsis, hypothermia - Hormone deficiencies: cortsiol, GH, hypopituitarism - Severe liver disease - Inborn errors of metabolism: glycogen storage disease, gluconeogenic defects, fatty oxidation defects, ketogenesis defects, organic acidaemias, galactosaemia, tyrosinaemia type 1
43
Causes of hypogonadotropic hypogonadism in men
Exogenous androgens Androgen deprivation therapy Hypothalamic-pituitary disorders (incl haemochromatosis) Opioids Glucocorticoids Chronic illness T2DM Obesity Sleep apnoea
44
Causes of increased uric acid
Gout Preeclampsia Tumour lysis syndrome
45
Causes of random error (QC troubleshooting)
Damaged/blocked/poorly aligned sample/reagent pipettor Aged photometer lamp Expired reagent
46
Actions to take if QAP is out
Check units, transcription errors, reconstitution errors (making up QAP sample) Review internal QC Check reagent lot changes and calibration results Check if other labs are having the same problem
47
Common patterns in QC troubleshooting
Controls in wrong cups (low is high and high is low) Shift in mean (NLN) Sawtooth (reagent/QC degradation)
48
CSF evaluation for meningitis
CSF glucose, lactate, LDH, CRP, adenosine deaminase
49
CSF evaluation for demyelinating disease
CSF index, oligoclonal banding
50
What is CSF oligoclonal banding?
Index of intrathecal IgG synthesis Bands present in CSF but NOT serum
51
Causes of oligoclonal banding on CSF
Multiple sclerosis Subacute sclerosing panencephalitis Neurosyphilis Neuro-AIDS Neuro-SLE Neuro-Behcets Neurosarcoid GBS Cysticercosis Neuro-Lyme disease
52
Procalcitonin interpretation
53
Causes of an increased CK
Analytical - macro CK Non-exertional (STEEMi) - Statins and other drugs - Traumatic/ compressive - Electrolyte disturbance (hypokalaemia, hypophosphataemia) - Endocrine (hypothyroidism, acromegaly, thyrotoxic periodic paralysis etc) - Myopathies (inflammatory- dermatomyositis, polymyositis etc) Exertional - Normal muscle: seizures, extreme exercise, environmental heat illness, sickle cell trait, hyperkinetic states - Abnormal muscle: metabolic and mitochondrial myopathies, malignant hyperthermia/neuroleptic malignant syndrome, dystrophinopathies (muscular dystrophies)
54
Causes of a hepatitic pattern of abnormal LFTs
Viral (HBV, HCV, EBV, CMV) Alcohol NAFLD Medications (NSAIDs, paracetamol, AEDs) Haemochromatosis Alpha-1-antitrypsin deficiency Autoimmune hepatitis PBC PSC Ischaemic
55
Causes of a falsely low HbA1c
Pathological: Increased red cell turnover eg haemolytic anaemia, recent red cell transfusion, recent iron infusion Chronic liver disease Pharmacological: Dapsone Hydroxyurea Antivirals (ribavirin, HAART) Preanalytical/analytical: Hb variant interference (HPLC/CZE) Hypertriglyceridaemia (immunoassay) Short EDTA sample (excessive calcium chelation) (Vitros)
56
Causes of a falsely increased HbA1c
Pathological: Iron deficiency with or without anaemia CKD B12 deficiency Alcohol Pharmacological: Aspirin Opiates Preanalytic/analytical: Hb variant (HPLC/CZE) Heterophile antibody
57
Causes of hypophosphataemia
Intracellular shift: refeeding, IV glucose/insulin, DKA, respiratory alkalosis (complex mech involving glycolysis and increased phosphorylation), burns, hungry bones Lowered renal phosphate threshold: hyperparathyroidism, iron infusion, renal tubular defects (familial hypophosphataemia, Fanconi syndrome), oncogenic osteomalacia, alcoholism, burns Decreased intestinal phosphate absorption: vomiting, diarrhoea, phosphate-binding antacids, malabsorption syndrome, vitamin D deficiency, alcoholism Genetic: X-linked hypophosphataemic rickets, Dent disease Drugs: Acetazolamide, bisphosphonates, diuretics, oestrogens, HIV therapy, salicylates, TKIs
58
Causes of cholestatic LFTs
1. Intrahepatic - neoplastic (primary or metastatic), infiltrative (amyloidosis, leukaemias, lymphomas), PBC, granulomatous, post-transplant cholangiopathy, AIDS, TPN 2. Extrahepatic - gallstones, head of pancreas tumours, cholangiocarcinomas, biliary stricture (congenital biliary atresia), PSC 3. Cholestatic hepatitis - drugs eg oestrogens and anabolic steroids, viruses
59
Metabolic myopathies associated with rhabdomyolysis
Disorders of lipid metabolism and glycogen storage disorders including McArdle's disease.
60
DDx methaemoglobinaemia
1. Drugs (most common cause) - dapsone, sulfamethoxazole, nitrates 2. Hereditary - types I, II, IV, HbM, unstable Hb, G6PD deficiency
61
Causes of a low anion gap
1. High chloride, iodide, bromide 2. Decreased albumin 3. Increased cations (calcium, magnesium, lithium, proteins)
62
Causes of increased transferrin
Iron deficiency Pregnancy Oestrogen therapy Hepatitis
63
Causes of increased serum iron
Recent iron infusion High biological variability Iron ingestion/poisoning
64
Interpretation of serum iron post-poisoning
1-6 hrs post-ingestion <55: unlikely to lead to clinical toxicity 55-310: mild gut toxicity >310: liver toxicity
65
Causes of raised plasma lactate
Preanalytical/analytical: haemolysis, red cell/plt leak, macro-LD Heart: MI, myocarditis (LD1 and 2) Liver: hepatocellular damage (LD5) Skeletal muscle: trauma, muscular dystrophy, dermatomyositis, myoglobinuria (LD 5) Misc: Infections, CTD, haemolysis, leukemia, pernicious anemia, myeloproliferative disorders, malignancy, renal infarction, pulmonary embolus, hypothyroidism, acute pancreatitis
66
The only cause of increased plasma albumin
Haemoconcentration
67
Causes of hypogammaglobulinaemia
Decreased synthesis Protein loss Decreased synth: transient (neonates), primary (immunodeficiencies), secondary Secondary causes of hypogammaglobulinaemia: Haem- myeloma, CLL, lymphosarcoma Toxins- uraemia, corticosteroids, cytotoxic, diabetes mellitus, celiac disease AIDS Protein loss - skin, gut, kidneys
68
List the 12 competitive immunoassays we run on Atellica
Anti-TPO Cortisol DHEAS Digoxin Oestradiol Folate FT4 FT3 Homocysteine Progesterone Testosterone Total B12
69
Causes of false positive GH suppression test
Poorly controlled diabetes mellitus Malnutrition/malabsorption/anorexia nervosa Renal disease Liver disease Uraemia Heroin addiction
70
Causes of low transferrin
71
Causes of low transferrin
Acute inflammation Chronic liver disease Haemochromatosis
72
Causes of increased angiotensinogen
Hyperthyroidism Pregnancy/oestrogens Glucocorticoids