nucleic acids + DNA Flashcards

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1
Q

structure of a nucleotide

A
  • pentose monosaccharide
  • phosphate group (PO42-)
  • nitrogenous base
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2
Q

polynucleotide

A
  • NT linked in condensation reactions
  • Phosphate on C5 forms covalent bond with OH group on C3
  • phosphodiester bonds
  • forms long strong sugar phosphate backbone
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3
Q

sugar in DNA structure

A
  • deoxyribose

- one fewer O2 than ribose

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4
Q

pyrimidines

A
  • smaller bases
  • single carbon ring
  • thymine + cytosine
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5
Q

purines

A
  • larger bases
  • double carbon ring
  • adenine + guanine
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6
Q

DNA structure

A
  • coiled in a double helix
  • held by H-bonds between bases
  • two antiparallel strands
  • polymer so contains a lot of info
  • double strand = stable + accurate replciation
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7
Q

RNA nucleotides

A
  • pentose sugar is ribose

- uracil base instead of T

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8
Q

semi conservative replication

A
  • DNA unwinds + separates : DNA helicase
  • DNA unzips
  • 2 separate strands = templates
  • free NT activated + align
  • complementary base pair
  • purine to pyrimidine
  • bases joined by DNA polymerase
  • H-bonds reform
  • sugar phosphate backbone reforms
  • using phosphodiester bonds
  • two identical mol of DNA formed
  • each with one old strand and one new strand
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9
Q

continuous replication

discontinuous replication

A
  • DNA polymerase binds to end of strand
  • free DNA NT added without any breaks
  • DNA polymerase can’t bind to end of strand
  • Free DNA NT added in sections then joined.
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10
Q

triplet code

A
  • sequence of 3 bases = codon

- codons code for amino acids

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11
Q

degenerate code

A
  • many amino acids can be coded for by more than one codon.
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12
Q

Transcription

A
  • RNA polymerase attaches to DNA double helix
  • section of DNA with gene needed unwinds + unzips
  • DNA helicase breaks H-bonds
  • antisense strand (3’ to 5’) = template
  • mRNA carries same base sequence as sense strand
  • RNA polymerase lines up free RNA NT alongside template strand
  • free RNA NT complementary base pair on antisense strand
  • Uracil replace thymine
  • RNAP catalyses formation of phosphodiester bonds between RNA NT
  • stop codon reached
  • mRNA detaches from DNA
  • mRNA leaves nucleus through nuclear pore
  • mRNA travels to ribosome.
  • double helix reforms
  • hydrogen bonds reform
  • DNA rewinds
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13
Q

translation

A
  • rRNA catalyses translation
  • mRNA binds to start codon (AUG)
  • tRNA with complementary anticodon binds to start mRNA codon
  • tRNA anticodon bind to complementary mRNA codon
  • amino acids arranged in correct sequence
  • forms primary structure of protein
  • amino acids bound by peptide bonds : catalysed by peptidyl transferase
  • amino acids added one at a time
  • stop codon stops translation
  • polypeptide released
  • folding into secondary/tertiary
  • further modifying at golgi
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14
Q

structure of ATP

A
  • ribose pentose sugar
  • joined to base (adenine)
  • and 3 phosphates
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15
Q

how does ATP release energy

A

ATP + H2O = ADP + Pi + energy

- hydrolysis reaction

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16
Q

why is ATP not a long term energy store

A
  • instability of phosphate bonds in ATP
  • unstable molecule
  • good immediate energy store : ATP rapidly reformed from phosphorylation of ADP
17
Q

why is ATP the universal energy currency

A
  • present in all cells
  • in all organisms
  • releases energy in small quantities
  • provides energy for reaction
  • no other equivalent molecule