Neurosciences and genetics Flashcards
Macroscopic changes in Alzheimer’s
1) Cortical Atrophy (hippocampus, parahippocampal gyrus, temporal amygdala esp parietal and frontal lobes)
2) low brain weight
3) ventricular dilation
4) Depigmentation of locus coeruleus
Microscopic changes in Alzheimer’s (5)
1) extracellular senile plaques (Beta amyloid plaques in grey matter - made from APP, concentrated in synapses)
2) Intracellular neurofilbillary tangles - hyperphosphorylated tau (a MAP)
3) Gliosis - increases in activated microglia and reactive astrocytes near amyloid plaques
4) Degeneration of the nucleus of Meynert (cholinergic neurones in basal forbrain, specifically in the Substantia innominata)
5) Hirano bodies (in hippocampi) - similar to LB but without ubiquitin (Eosinophilic, football shaped inclusion seen in neurons of the brain - also seen in normal ageing) - composed mainly of ACTIN
Pineal Gland secretes:
Melatonin
Macroscopic pathological findings in Huntington’s (3)
Frontal atrophy
Marked bilateral atrophy of the caudate and putamen = chorea
Enlarged ventricles
Microscopic pathological findings in Huntington’s (3)
Neuronal loss and gliosis in the cortex
Neuronal loss in the striatum
Inclusion bodies in the neurons of the cortex and striatum
Huntington’s genetics and EEG:
- Trinucleotide repeat - CAG, Chrom 4
- More repeats = more severe illness
- CAG length is more unstable when inherited from the father
- shows anticipation
Normal CAG = repeated 27 times. More in Huntingtons
EEG - Flattened trace
Knight’s move inheritance is seen in:
X-linked conditions
A phenotype is:
An individual’s observable traits. It results from the interaction between the genotype and the environment.
A genotype is
an individual’s collection of genes
A haplotype is:
a set of DNA variations, or polymorphisms on a chromosome, that tend to be inherited together
A karyotype is:
An individual’s collection of chromosomes.
The process of paring, ordering, and visualising the chromosomes is called karyotyping.
Penetrance vs Expressivity
Penetrance describes the proportion of a population of individuals who carry a disease-causing allele who express the related disease phenotype.
Penetrance describes ‘how likely’ it is that a condition will develop
examples of conditions with incomplete penetrance include retinoblastoma and Huntington’s disease
Expressivity describes the extent to which a genotype shows its phenotypic expression in an individual.
Expressivity describes the ‘severity’ of the phenotype
a condition with a high level of expressivity is neurofibromatosis
Mitrochondrial inheritance:
Males and females affected, but always being maternally inherited
An affected male does not pass on his mitochondria to his children, so all his children will be unaffected
Components of the Basal Ganglia:
1) Striatum (caudate, putamen, nucleus accumbens (CPN)
2) Subthalamic nucleus
3) Globus pallidus
4) Substantia nigra (divided into pars compacta and pars reticulate)
(putamen and globus pallidus are collectively referred to as the lenticular nucleus.)
Four main conditions resulting from problems with the BG:
1) Huntington’s chorea (caudate nucleus)
2) Wilson’s disease (copper deposition in basal ganglia)
3) Parkinson’s disease (substantia nigra)
4) Hemiballism (subthalamic nucleus)
Sensory Cranial Nerves:
1 - Olfactory
2 - Optic
5 - Trigeminal*
7 - Facial*
8 - Vestibulococlear
9 - Glossopharyngeal*
10 - Vagus*
Motor Cranial Nerves:
3 - Occulomotor
4 - Trochlear
5 - Trigeminal*
6 - Abducens
7 - Facial*
9 - Glossopharyngeal*
10 - Vagus*
11 - Accessory
12 - Hypoglossal
A young person presenting with atypical psychosis, seizures, and movement abnormalities - diagnosis? 2 main categories?
Autoimmune Encephalitis
1) Antibodies against neuronal cell surface/ synaptic receptors
- usually treatable
2) Antibodies against intracellular antigens
- less responsive to treatment, assoc with tumours (ab’s include anti-Hu and anti-ma)
NB: Learn specific abs
(Anti-NMDAR is the most commonly associated)
Small class 1 neurotransmitters include: (1)
Acetylcholine
Small class 2 neurotransmitters include: (5) - Amines
Dopamine
Histamine
Serotonin
Noreinephrine
Epinephrine
Small class 3 neurotransmitters include: (4) - Amino acids
GABA
Glycine
Glutamate
Aspartate
Small class 4 neurotransmitters include: (2)
Carbon monoxide
Nitric oxide
Large neurotransmitters include:
Endorphins
Neuropeptides
Oxytocin
Cannabinoids
(Large: CONE)
Excitatory neurotransmitters include:
Acetylcholine
Epinephrine
Norepinehrine
Dopamine*
Serotonin
Glutamate
GAS DEN
Inhibitory neurotransmitters include:
Dopamine*
Glycine
GABA
Ionotropic Receptors:
mediates its effect by opening an ion channel on the surface of a cell
short lived effect
specific
rosette shaped
Metabotropic receptors:
G-protein coupled - when activated imitates a reaction within the cell.
Longer lasting effects
Diffuse rather than specific effects
What is a Circumventricular Organ?
Unique areas of the brain that lack a blood-brain barrier, allowing them to directly interact with substances in the bloodstream. These regions have an endocrine function and play crucial roles in homeostasis by monitoring and responding to changes in body fluid composition.
- midline structures around 3rd and 4th ventricles
- in contact with CSF and blood
- highly permeable capillaries
6 circumventricular organs:
3x chemosensory
- Area Postrema (vomiting centre)
- Vascular Organ of Lateral Terminalis
- Subfornical Organ (regulates thirst)
VOLT, SO AP
4x secretory
- Pineal Body
- Posterior pituitary
- Median Eminence
- Subcommisural Organ
SOME PP PB
Blood Brain barrier facts:
Endothelial Cells - joined by tight junctions
Lipid soluble and small molecules pass through easily
Water soluble and large molecules do not pass through easily
Fenestrated at the circumventricular organs
Increased permeability when inflamed
Serves to separate the blood from the BECF (brain extracellular fluid)
Lewy Bodies are:
- intracellular protein aggregates primarily composed of alpha-synuclein (in neurones)
- present particularly in those areas with high concentrations of dopaminergic neurons such as the substantia nigra and basal forebrain
- accumulation leads to neuronal dysfunction and eventual death, resulting in a decrease in dopamine levels.
Spongiform changes in the cortex - seen in:
Prion diseases e.g CJD
Macroscopic changes in LBD (2)
1) Cerebral atrophy (but less marked than in Alzheimer’s)
2) Pallor of the substantia nigra and of the locus coeruleus
Microscopic changes in LBD (3)
1) Lewy bodies - intracellular deposits consisting mostly of alpha synuclein and get degraded by ubiquitin - NB can also be found in Amygdala in Alzheimer’s
2) Neurofibrillary tangles and senile plaques
3) Neuronal loss and gliosis are usually restricted to brainstem regions, particularly the substantia nigra and locus ceruleus.
3 lobes of the cerebellum
Flocculonodular lobe
Anterior lobe
Posterior lobe
3 functional divisions of the cerebellum:
1) vestibulocerebellar - balance, spatial orientation
2) Spinocerebellum - fine-tuned body movements
(Vermis and intermediate zones - midline)
3) cerebrocerebellum (lateral hemispheres) - planning movement, conscious assessment of movement
4 anatomical areas of the cerebellum:
Vermis - assoc with bodily posture and locomotion
Folia - pleat-like gyri on surface
Arbor Vitae - “tree of life” - cerebellar white matter
Cerebellar peduncles - 3 pairs, used to communicate with the nervous system
AV CP F V
Lesions in Dominant Parietal Lobe (5):
1) Gerstmann’s Syndrome - includes agraphia, acalculia, finger agnosia, left-right disorientation
2) Language disorders including aphasia
3) Alexia - inbility to read
4) Anomia - can’t find right word
5) impaired writing and mathematics
Lesions in Non-dominant Parietal Lobe (7):
1) Spatial disorientation including limbs
2) Hemispatial neglect on opposite side
3) Prosopagnosia (can’t recognise faces)
4) Constructional Aphasia
5) Dressing Apraxia
6) Topographical disorientation
7) Anosognosia (inability to acknowledge illness)
Kluver-Bucy syndrome
Amygdala lesion - bilateral temporal lobes
Hypersexuality, hyperorality, hyperphagia, visual agnosia, blunted affect with apathy
Balint’s Syndrome
Bilateral Parieto/Occipital lesion
Can’t direct eyes to specific point in visual field (occulomotor apraxia)
Optic ataxia - difficulty interacting with objects in visual field
Simultanagnosia - can’t perceive multiple objects at once
Variant CJD vs Sporadic CJD (6)
Duration:
v - longer, >1 year
S - shorter, months
Symptoms
v - psychiatric and behavioural, later neurology
S - neurological
MRI and EEG
v - Pulvinar sign ( bilaterally hyperintense pulvinar nuclei of the THALAMUS on FLAIR or diffusion-weighted MRI images), generalised slowing on EEG but nothing specific
S - Bilateral anterior basal ganglia high signal, EEG - biphasic and triphasic waves 1-2/sec
Origin and age of onset
v - infected meat products, younger people 25-30
S - genetic mutation, older people 55-65
Note: Detection of 14-3-3- proteins in the CSF is highly specific for CJD and can be particularly helpful in diagnosing sporadic CJD
8 candidate genes for schizophrenia and which chromosome:
DISC1 (c.1)
Dysbindin DTNBP1 (c.6)
Neuregulin NRG1 (c.8)
COMT (c.22)
G72 (c.13)
RGS4 (c.1)
DAOA (c.13)
DRD2 (c.11)
COMT in schizophrenia
- Role in dopamine metabolism esp in prefrontal cortex. clears dopamine from synapses
- Strongest association gene
- Role in degradation of catecholamines
- Low activity of COMT = assoc with schiz and OCD
- Chrom 22 (assoc w/ velocardiofacial disorder - 20% of these patients have psychosis)
Neuregulin in schizophrenia
- NRG1 = growth factor that stimulates neuron development and differentiation
- Increased neuregulin signaling in schizophrenia may suppress the NMDA receptor, leading to lowered glutamate levels
- Chromosome 8
Dysbindin in schizophrenia
- Expression decreased in schizophrenia
- may reduce glutamate levels
- chromosome 6
- MOST CONSISTENT CANDIDATE GENE in schizophrenia
DISC 1 in schizophrenia
- DISC1 encodes a multifunctional protein that influences neuronal development and adult brain function
- Disrupted in schizophrenia
- Chromosome 1
Define x3 (Affinity, Potency, Efficacy) of drug in relation to receptors
1) Affinity - How avidly the drug binds to the receptor
2) Potency - The concentration or dose of a drug required to produce 50% of the drug’s maximal effect. Potency depends on both the affinity of a drug for its receptor, and the efficacy with which drug-receptor interaction is coupled to response
3) Efficacy - Also referred to as ‘intrinsic activity’ of a drug is the ability of the drug to elicit a response when it binds to the receptor
3 genes of importance in EOFAD (Early Onset Familial Alzheimer’s Disease)
N.B very rare - only 1-6% Alzheimer’s cases
PSEN-1 - 30-70% (Chrom 14) - most common
APP - 10-15% (Chrom 21)
PSEN-2 5% (Chrom 1)
The presenilins are components of enzymes that cleave APP to produce amyloid beta fragments of different lengths.
Mutations in the presenilins account for the majority of genetic early-onset Alzheimer’s cases.
Autosomal Dominant
Glial cytoplasmic inclusion bodies visible in the CNS, found in Multi-System Atrophy
Papp-Lantos Bodies
Large, dark-staining aggregates of proteins in neurological tissue found in FTD
Pick Bodies
Round, concentrically laminated, pale eosinophilic cytoplasmic inclusions (aggregates of alpha-synuclein)
Lewy Bodies, found in PD and LBD
1) Acidophilic, stellate inclusions in giant cells
2) Concentrically laminated inclusions (up to 50µm) in giant cells
Both found in sarcoidosis and berylliosis
1) Asteroid bodies
2) Schaumann cells
Inactivated X chromosome - dark staining mass in contact with the nuclear membrane
Barr Bodies
Alcoholic hyalin - eosinophilic intracytoplasmic inclusions in hepatocytes: intermediate filaments, predominantly prekeratin
Mallory Bodies - found in alcoholic hepatitis, alcoholic cirrhosis, Wilson’s disease, primary-biliary cirrhosis
Palisaded lamellated membranous cytoplasmic bodies seen in macrophages
Zebra bodies - Niemann-Pick disease, Tay-Sachs disease, or any of the mucopolysaccharidoses
Nuclei of damaged cells with bound anti-nuclear antibodies which become homogeneous and loose chromatin pattern
LE bodies (hematoxylin bodies) - seen in lupus
Palisades of nuclei at the end of a fibrillar bundle, seen in Schwannoma
Verocay bodies
Kayser-Fleischer rings
Seen on the cornea in wilson’s disease
Kuru plaques
Composed partly of a host-encoded prion protein, sometimes seen in CJD
Gyri of Parietal lobe (3):
1) Angular - maths, language, cognition (anomic aphasia if lesion - AAA) - area affected in GERSTMANN SYNDROME
2) Post-central - touch
3) Supramarginal - empathy
PArietal lobe is SUPER
Gyri of temporal lobe (2):
1) Fusiform - Face and body recognition, word and number recognition (visual) - involved in facial recognition
2) Superior temporal - Language Comprehension (Wernicke’s area), and sensation of sound. Reduced gray matter volumes in the superior temporal gyrus (STG) have been reported in patients with schizophrenia
Gyri of Frontal lobe (2):
1) precentral- voluntary movement and control
2) superior frontal - laughter and self-awareness
Gyri related to hippocampus (2):
1) Parahippocampal - surrounds the hippocampus - involved in memory, can be asymmetrical in schizophrenia
2) Dentate: Formation of episodic memory
Lingual and cingulate gyri (location and function):
1) Lingual - occipital lobe, dreaming and visual word recognition
2) Cingulate - adjacent to the corpus collosum, for emotion, memory and learning
Broca’s vs Wernicke’s:
Brocas:
Broadmanns 44, 45, frontal lobe, motor
Damage causes BROKEN words i.e non-fluent aphasia. Expressive aphasia - have understanding but can’t express it
(can be caused by occlusion of MCA)
Wernicke’s:
Broadmanns 22, posterior part of the superior temporal gyrus in the dominant hemisphere (next to primary audotory area)
Damage causes fluent aphasia - normal words but nonsensical - WACKY. Receptive aphasia - can’t understand speech
Two main types of Acetylcholine receptors:
Nicotinic - ionotropic, stimulated by ACh and nicotine - increases dopamine
Muscarinic - metabotropic, stimulated by muscarine and Ach (5 subtypes)
4 major pathways of dopamine:
Mesolimbic (VTA to NA) -Reward pathway
Mesocortical (VTA to cortex) - hypofunction = Neg sx
Nigrostriatal (SN to striatum) (Blockage = ESPEs)
Tuberoinfundibular (Hypothalamus to pituitary) - (blockage = Increased PROLACTIN)
What is the Ventral Tegmental Area?
The ventral tegmental area (VTA) is a group of dopaminergic cells located in the midbrain that are involved in reward and pleasure.
Start of both the mesolimbic and mesocortical pathways
Along with the NA the VTA plays acentral role in reward processing and therefore drug addiction.
Acetylcholine
1) Source
2) breakdown
3) re-uptake
4) function
5) sites of release
1) Choline and Acetyl co-A - catalysed by choline acetyltransferase (SITE: nucleus of Meynert in Basal Forebrain)
2) metabolite - choline. Catalysed by Acetylcholinesterase
3) no re-uptake, degraded choline is recycled
4) arousal modulation, learning, thirst, memory, REM, pain, perception
5) forebrain, brainstem
5 types of Muscarinic (ACh) receptors:
M1 - Exocrine function, inhibits dopamine release, affects cognitive function and seizure activity
M2 and M3 - mainly involved in smooth muscle contraction. M2 causes bradycardia, M3 inhibits dopamine release
M4 and M5 - ONLY in CNS - facilitate dopamine release.
Lyonisation:
Process of X-inactivation
Normal in females - inactivates one of X chrom, so genetic info not duplicated
Inactivated X chromosome = Barr body
Affects phenotype in Kleinfelter’s (XXY)
Genomic Imprinting:
Refers to a situation where a piece of DNA can behave differently depending on whether it is inherited from the mother or the father
Eg: Angelmann’s vs Prader-Willi syndrome - both due to deletion of 15q but A = from mother, PW = from father
Chromosomes with small p arms, that can be involved in Robertsonian translocations:
Acrocentric Chromosomes
A chromosome with equally sized p and q arms is referred to as:
Metacentric
RNA differs from DNA in 4 ways:
1) single stranded
2) much shorter
3) Base U instead of T
4) nucleotides contain ribose, rather than deoxyribose
3 main types of RNA:
1) Ribosomal RNA (rRNA) is what ribosomes are made up of and provides a place for mRNA and tRNA to attach during translation.
2) Messenger RNA (mRNA) is the RNA that carries information from DNA from the nucleus to the ribosomes.
3) Transfer RNA (tRNA) bring amino acids to the ribosome during translation
Transcription vs translation of RNA:
Transcription is the synthesis of RNA from a DNA template (i.e copying)
Uses RNA polymerases
3 steps - initiation, elongation, termination
Translation refers to the synthesis of polypeptides (proteins) from mRNA.
Translation takes place on ribosomes in the cell cytoplasm, where mRNA is read and translated into the string of amino acid chains that make up the synthesized protein.
Uses mRNA, tRNA and rRNA
Same 3 stages as above
Dysarthria - 5 types
Spastic (UMN)
Flaccid (LMN)
Hypokinetic (extrapyramidal)
Hyperkinetic (extrapyramidal)
Ataxic (cerebellar)
Spastic Dysarthria (features, conditions, localisation)
Explosive and forceful, at a slow rate
Pseudobulbar palsy, spastic hemIplegia
UMN
Flaccid Dysarthria (features, conditions, localisation)
Breathy, nasal, imprecise consonants
Myesthenia Gravis
LMN
Hypokinetic vs Hyperkinetic dysarthria
Both: extrapyramidal
Hypo: slow, quiet, monotonous, tremor - seen in PD
Hyper: strained, stoppages at inappropriate moments, variable rate - seen in tardive dyskinesia, Huntingtons, Sydenham’s chorea
Ataxic dysarthria (features, conditions, localisation)
rapid, slurred, mono-pitched - seen in Friedrich’s ataxia, alcohol abuse - cerebellum
3 types of white matter tracts:
Projection tracts:
Connect higher centers of the brain (those beyond the brain stem) with lower centers (e.g. brainstem and spinal cord)
Commissural tracts:
Connect the two hemispheres together
Association tracts:
Connect regions of the same hemisphere. Note: Long association connect separate lobes together whereas short association fibers connect separate gyri of the same lobe
5 examples of projection white matter tracts:
Corticospinal and corticobulbar - connect motor cortex to brain stem and spinal cord
Corona Radiata - from cortex to brainstem via the internal capsule
Internal capsule - Major conduit of fibers to and from the cerebral cortex
Geniculocalcarine Tract (optic radiation) - connects LGN to occipital (primary visual) cortex
2 types of commisural white matter tracts
1) Corpus Collosum - largest white matter bundle, connects two cerebral hemispheres
2) Anterior/ commissure AKA pre-commissure - crosses through the lamina terminalis (lateral wall of 3rd ventricle). Connects temporal lobes and amygdala and olfactory bulbs. Its anterior fibers connect the olfactory bulbs and nuclei; its posterior fibers connect middle and inferior temporal gyri
7 types of Association White Matter Tracts:
6 = Faciculus (faSIXulus)
1 = Cingulum (1 = SINGLE-um)
1) Cingulum - connects cingululate gyrus and enthorinal cortex (limbic system)
2 and 3) Superior and Inferior Orbitofrontal Faciculus - connect frontal and occipital lobes
4 ) Superior Longitudinal faciculus - Connects the frontal lobe cortex to parietal, temporal, and occipital lobe cortices (the largest association bundle)
5) Inferior longitudinal (occipitotemporal) faciculus - Connects temporal and occipital lobe cortices
6) Uncinate Faciculus - Connects the orbital and inferior frontal gyri of the frontal lobe to the anterior temporal lobe, connecting orbitofrontal cortex with parts of the limbic system
7) Arcuate - connects Brocas to Wernickes
Localise the lesion:
- Hemiparesis of the contralateral foot and leg (more severely than the arm)
- Sensory loss of the contralateral foot and leg
- Transcortical motor aphasia (lack of fluency with intact comprehension and repetition)
- Abulia, disinhibition, executive dysfunction, anosognosia (lack of insight), emotional lability, frontal release signs (re-emergence of primitive reflexes)
Anterior cerebral artery (ACA occlusion) - suspect if frontal signs
Localise the lesion:
- Hemiparesis of the contralateral face and limbs
- Sensory loss of contralateral face and limbs
- Dysphasia / aphasia (when dominant hemisphere affected) (Broca and Wernicke)
- Contralateral neglect
- Homonymous hemianopia or quadrantanopia without macular sparing (macular vision not preserved)
- Dorsolateral prefrontal dysfunction
Middle Cerebral Artery occlusion
Localise the lesion:
- Alexia without agraphia (left side) - can’t read, can still write
- Contralateral loss of pain and temperature sensation
- Contralateral hemianopia (with macular sparing)
- Prosopagnosia
- Ipsilateral cranial nerve defects (V, VIII, IX, X, & XI)
- Horner’s syndrome
Posterior Cerebral Artery occlusion - suspect if visual field issues
What type of stroke?
- presents with either isolated hemiparesis, hemisensory loss or hemiparesis with limb ataxia
- strong association with hypertension
- common sites include the basal ganglia, thalamus and internal capsule
Lacunar Stroke
Note: Internal capsule is innervated by the Circle of Willis
Syndrome and blood supply?
Ipsilateral CN III palsy
Contralateral weakness of upper and lower extremity
Weber’s syndrome (branches of the posterior cerebral artery that supply the midbrain)
Syndrome and blood supply?
Ipsilateral: facial pain and temperature loss
Contralateral: limb/torso pain and temperature loss
Ataxia, nystagmus
Note: if have ipsilateral facial paralysis and deafness…?
Posterior inferior cerebellar artery (lateral medullary syndrome, Wallenberg syndrome)
POST a MEDal to Wallenberg)
If have ipsilateral facial paralysis and deafness - Anterior inferior cerebellar artery (lateral pontine syndrome)
ANTs in the PONd are DEAF
Locked In Syndrome is caused by a lesion in which artery?
Basilar artery/ lesion in the pons or medulla
Amaurosis fugax is caused by a lesion in which artery?
Retinal/ ophthalmic artery
Codons:
Three base nucleotides together
Code for amino acids
64 possible codons (triplet sequences)
The 3 trisomies that survive to birth are:
Trisomy 21 (Down’s syndrome) - 1 in 800 births
Trisomy 18 (Edwards syndrome) - 1 in 6000 births (E for EIGHTEEN) - severe intellectual disability, babies often die soon after birth. Kidney malformations, upturned nose, webbing of second and third toes, and clubbed feet (rocker bottom).
Trisomy 13 (Patau syndrome) - 1 in 10,000 births - Severe intellectual disability, babies often die soon after birth. Most have congenital heart malformations, anophthalmia and a cleft palate.
SYNDROME:
short stature (usually apparent by age 5), webbed neck, widely spaced nipples. Absent periods and incomplete breast development are common. Most affected are infertile (although assisted reproduction is an option). Intelligence tends to be normal although rates of intellectual disability are increased.
Turner Syndrome - 1/5000 female births
45X, or 45XO
SYNDROME:
Considerable variability but most able to live independently and form normal adult relationships. Although intellectual disability is not the norm, some degree of speech and language / educational issue is not uncommon. May be taller than expected. Normal sexual development and fertility is expected (although infertility can occur). Low set ears are associated.
Kleinfelter’s Syndrome (XXY) - 1-2/1000 male births
4 conditions to know that result from a structural abnormality in the chromosomes (deletions):
- 22q11 Deletion Syndrome (DiGeorge Syndrome/Velocardiofacial Syndrome) - a deletion in the long arm of chromosome 22 (22q11.2)
- Cri-du-Chat Syndrome - caused by a deletion in the short arm of chromosome 5
- Prader-Willi Syndrome - typically caused by a deletion in the long arm of chromosome 15 inherited by father
- Angelman Syndrome - typically caused by a deletion in the long arm of chromosome 15 inherited by mother
Classic Hakim’s triad of normal pressure hydrocephalus (communicating hydrocephalus):
Gait instability
Urinary incontinence
Dementia
(wet, wobbly, wacky)
Which syndrome:
Bilateral posterior parietal/ occipital lobe dysfunction - triad of:
1) optic ataxia
2) occulomotor apraxia
3) simultanagnosia
Balint’s syndrome
(BILATERAL - B)
How does the amygdala function in the context of fear?
It acts to enhance the fight-or-flight response through its connections with the hypothalamus and periaqueductal grey matter.
Which term describes heritable phenotype changes that do not involve alterations in the DNA sequence?
Epigenetic
Note: Epigenetics involves genetic control by factors other than an individual’s DNA sequence. Epigenetic changes can switch genes on or off and determine which proteins are transcribed.
1) The nearer two loci are on a chromosome the less likely they are to be separated by crossing over. The measure of the distance between loci is called the:
2) A measure of the likelihood of two loci being within a measurable distance of each other is called the:
1) Recombination fraction - can vary from 0-50%
2) LOD score - >3 is considered evidence for linkage, and a LOD score of <-2 excludes linkage.
2 types of gene mapping:
1) Genetic linkage mapping - uses techniques such as pedigree analysis.
2) Physical mapping - a technique used to find the order and physical distance between DNA base pairs by DNA markers
A phenomenon whereby the symptoms of a genetic disorder become apparent at an earlier age as it is passed on to the next generation.
Anticipation
5 main structures of the Papez circuit:
1) Hippocampus
2) Mamillary Bodies (part of hypothalamus. Involved in memory and spatial orientation)
3) Anterior Nucleus of the Thalamus (relay station)
4) Cingulate Cortex (Associated with decision-making, empathy, and emotion.)
5) Enthorinal Cortex (in the parahippocampal gyrus - Functions as an interface between the hippocampus and neocortex and is involved in memory and navigation.)
What is Gerstmann’s Syndrome?
Dominant Parietal Lobe dysfunction:
agraphia, acalculia, finger agnosia, and RL disorientation
What percent of Caucasians are estimated to be homozygous for the isoform alcohol dehydrogenase ADH1B*1?
85-95%
i.e slow metabolisers of alcohol - no flushing reaction
Which gene is considered to have the greatest impact on the risk of alcohol dependency?
ADH1B (also ALDH2)
What is the most common cause of genetic LD?
Fragile X syndrome - trinucleotide repeat disorder CGG
a genetic syndrome characterised by mental retardation, an elongated face, macrocephaly large protruding ears, and large testicles (in men), “cluttered” speech
They tend to be shy, avoid eye contact, and have difficulties reading facial expressions. They often display stereotypic movements such as hand flapping.
Abnormal speech
It is an X-linked dominant disorder caused by the amplification of a CGG repeat in the 5 untranslated region of the fragile X mental retardation 1 gene (FMR1).
MORE REPEATS = MORE SEVERE
Males = affected more severely as only have 1 X chromosome
Planum Temporale (in Sylvian Fissure) Asymmetry is reduced in which 2 conditions:
(Bonus: what is the anterior border of the Planum Temporale called?)
Schizophrenia and Dyslexia
Involved in complex auditory processing, contains Wernicke’s area
Heschl’s gyrus (transverse temporal gyrus) is the anterior border of the planum temporale - contains Broadmann’s 41
Which Syndrome:
Elfin like features, social disinhibition, and abnormal friendliness towards strangers. Very sensitive hearing is also seen (hyperaccusis). Advanced verbal skills, speech is articulate but superficial (referred to as cocktail party speech). Cardiac issues (most common being supravalvular Aortic Stenosis)
William’s Syndrome - 7q11 deletion
Can be detected by FISH
Deletion takes place during meiosis
1/20000
Where are the following synthesised:
1) GABA
2) serotonin
3) Norepinephrine
1) Nucleus Accumbens
2) Raphae nucleus (brainstem) and endochromaffin cells (GI tract)
3) Locus Ceruleus
2 main measures of twin concordance rates:
1) Pairwise - This rate represents the proportion of twin pairs in which both individuals express a particular trait or condition. Especially useful when comparing MZ and DZ twins to gauge genetic component of a condition
(calculated by number of twin pairs where both twins have the trait/ total number of twin pairs)
2) Probandwise - This rate considers only those twin pairs where at least one twin manifests the trait. It’s essentially the likelihood that the second twin will also have the trait if the first one does. Can be more useful in rare conditions
What is Nissl Substance?
A Nissl body is a large granular body found ONLY in neurons. They consist of rough endoplasmic reticulum (with free ribosomes) and are the SITE OF PROTEIN SYNTHESIS
Concordance of autism in MZ and DZ twins:
Monozygotic concordance = 60-90% (Castelbaum, 2020)
Dizygotic concordance = closer to 30% (Frazier, 2014)
Which street drugs block SERT?
SERT = monoamine transporter that takes up serotonin
Blocked by MDMA, amphetamine, cocaine
MAC is SERTain
The most well known ATP-driven transporter at the BBB is:
P-glycoprotein
DAT vs SPECT scans:
A DAT scan specifically focuses on measuring the density and integrity of dopamine transporters in the brain.
SPECT, on the other hand, is a broader imaging technique that measures cerebral blood flow, metabolism, and neuroreceptor activity in the brain.
Low levels of which metabolite are seen in depression, aggression and suicidality?
5-hydroxyindoleactic acid (5-HIAA) - a metabolite of serotonin
Utilisation behaviours result from damage to which brain area?
Frontal lobe:
‘Utilization behaviour’ (UB) refers to the automatic elicitation of instrumentally correct, yet highly exaggerated and or inappropriate motor responses to environmental cues and objects i.e loss of normal inhibitory control
3 cardinal features of Multi-System Atrophy:
3 ways it presents:
MSA is a Parkinsons-Plus Syndrome.
3 features:
1) Parkinsonism
2) Autonomic failure
3) Cerebellar ataxia
PAC
3 presentations:
1) Striatonigral degeneration (mainly Parkinson features) - responds poorly to Levodopa
2) Shy-Drager Syndrome (mainly autonomic features)
3) Olivopontocerebellar atrophy (mainly cerebellar features)
Microscopic findings:
- Pappp-Lantos Bodies (alpha-synuclein inclusions in oligodendrocytes found in the substantia nigra, cerebellum, and basal ganglia).
Macroscopic features:
- greenish discolouration and atrophy of the putamen
- pallor of substantia nigra
- cerebellar atrophy
EEG frequencies between 1-12Hz (3 types)
DTA:
(DTs caused by Alcohol)
1-4Hz - Delta
4-8Hz - Theta
8-12Hz - Alpha
Delta - slow wave sleep (s.III), babies. If present in awake adults = pathology
(D - DON’T want when awake, D for Deep sleep)
Theta - Drowsy/ sleeping adults (s.I), meditation, young children. If ++ when awake = pathology
Alpha - meditation, when relaxed and when eyes closed but awake. They disappear with drowsiness, concentration, stimulation, visual fixation.
EEG frequencies between 12-100Hz (3 types)
SBG:
12-14Hz - sigma
12-30Hz - Beta (OVERLAP 12-14)
30-100 - Gamma
Sigma - (SLEEP SPINDLES) - Sleep (s.II), seen along with k-complexes
Beta - busy, concentrating
Gamma - very advanced meditation
EEG: Reduced Alpha and Beta, increased delta and theta
Alzheimer’s
EEG: diffuse slowing
Encephalopathy
Normal ageing (focal/ diffuse - if focal, left temporal region)
Delirium - along with reduced alpha, increased theta and delta
END
EEG: low voltage, no alpha (flattening)
Huntington’s
EEG: Hyperactive trace, fast
DTs
EEG: early on there is non specific slowing, later periodic biphasic and triphasic synchronous sharp wave complexes superimposed on a slow background rhythm
CJD (sporadic only!) - S for Slowing and Sporadic and Synchronius Sharp waves
6 Types of epilepsy and their EEG findings:
West Syndrome:
1) TYPICAL absence (petit mal) - generalized 3Hz spike wave
2) ATYPICAL absence - slow (<2.5Hz ) generalized spike-and-wave
(A for absence, low loltage. A before T - Atypical = lower Hz)
3) Focal (Partial) - focal spikes
4) Myoclonic - Generalized 3-6 Hz polyspike and wave discharge
5) Generalised Tonic-Clonic - EEG often obscured by artifact (movement). Generalized fast rhythmic spikes are seen in the tonic stage. Bursts of spikes and after-coming slow waves are synchronous with clonic jerks. A postictal period of irregular slow activity follows
6) Atonic (drop attack) - Generalized spike-and-wave is typical, with atonia at the time of the slow wave
West Syndrome: Infantile spasms
Hypsarrythmia on EEG, chaotic high amplitude polyspike waves
Thre recognisable clinical syndromes under the umbrella of FTD:
1) Behavioural-Variant Frontotemporal Dementia (bvFTD) (Pick’s disease)
2) Semantic-variant PPA (svPPA) - anterior temporal lobe affected
3) Non-fluent-variant PPA (nfvPPA)
PPA - primary progressive aphasia
3 neurodegenerative diseases that overlap clinically with FTD:
1) corticobasal degeneration (CBD)
2) progressive supranuclear palsy (PSP)
3) amyotrophic lateral sclerosis (ALS)
What is corticobasal degeneration (CBD)?
Rare progressive neurodegenerative disease that overlaps with FTD
Involves cerebral cortex and basal ganglia
Movement symptoms are ASYMMETRIC and include apraxia, aphasia, parkinsonism and alien hand syndrome
3 main proteins associated with FTD:
1) TAU (MAPT gene - c.17)
2) TDP-43 (genes: GRN, C9orf72, VCP, TARDBP)
3) FUS
What is Hardy-Weinberg Equilibrium?
The 5 assumptions of HW equilibrium:
The genetic variation in a population will remain constant from one generation to the next in the absence of disturbing factors
1) No mutations
2) No gene flow/ migration
3) Random (chance) mating
4) No genetic drift (i.e large enough pop prevents chance mutations causing mass change)
5) no natural selection (i.e differences in alleles have no evolutionary advantages or disadvantages)
Define endophenotype
Who introduced the concept of endophenotypes?
Measurable components, unseen by the unaided eye, along the pathway between disease and distal genotype, representing simpler clues to genetic underpinnings than the disease syndrome itself
Gottesman and Shields (1973)
5 types of single-gene (monogenic/ Mendelian) inheritance:
AD
AR
X-linked dom
X-linked rec
Y linked
Which cell component:
Modifies, sorts, and packages macromolecules for cell secretion (exocytosis) or use within the cell
Golgi Apparatus
Which cell component:
Consists of rough endoplasmic reticulum (with free ribosomes) and is the site of protein synthesis
Nissl Substance
Which cell component:
Contains the nucleolus and chromosomes, responsible for maintaining the integrity of genes and controlling the activities of the neuron by regulating gene expression
Nucleus
Which cell component:
Is involved in lipid synthesis, metabolism of carbohydrates, regulation of calcium concentration, drug detoxification, and attachment of receptors on cell membrane proteins
Smooth endoplasmic reticulum
Which Cell component:
Powerhouses of the cell involved in energy production through the process of oxidative phosphorylation
Mitochondria
Which Cell Component:
Provide structural support, involved in cell movement and transportation of organelles within the cell cytoplasm
Microfilaments and microtubules