Neurobiology of Disease 10 Flashcards
Fill in the gaps relating to the gut-brain axis. (5)
There is a …….directional communication between the ………………… and ………………… nervous systems, linking ………………….. and …………………. centres of the brain with peripheral intestinal functions.
bi
central
enteric
emotional
cognitive
The enteric nervous system has about 600 million neurones, which facilitate what four general functions of the GI tract? (4)
- Motor
- Sensory
- Absorptive
- Secretory
Apart from the central and enteric nervous systems, name another division of the nervous system, along with a neuroendocrine pathway which play a role in the gut-brain axis. (2)
Autonomic nervous system (vagus nerve)
HPA axis
Give five general types of ‘pathway’ which may facilitate communication between the gut and the brain. (5)
- Circulation
- Metabolic pathways
- CNX (vagus)
- Endocrine pathways
- Immune pathways
Give four general types of molecules that can facilitate communication between the gut and the brain. (4)
Neurotransmitters
SCFAs
Indoles
Metabolites
What is bottom-up signalling, when referring to the GBA? (1)
Give three neural pathways that can facilitate bottom-up signalling. (3)
Signals arise from lumen of GI tract and go to CNS (afferent signalling)
- Enteric nervous system
- Spinal nerves
- Vagus nerve
Give two direct routes of communication in the GBA. (2)
Vagus nerve
Bloodstream
Give three indirect ways in which the gut may communicate with the brain in the GBA. (3)
- Immune activation
- Altered intestinal permeability
- Entero-endocrine signalling
Give six general brain processes or conditions which may be contributed to by gut dysbiosis. (6)
- Neuroinflammation
- Brain development
- Psychiatric disorders
- Autism
- Anxiety-depressive behaviours
- Neurodegeneration
Neural and circulatory lines of communication in the GBA can allow the brain to influence the activities of intestinal functional effector cells.
Name five intestinal functional effector cells which may be influenced by the brain. (5)
- Immune cells
- Epithelial cells
- Enteric neurones
- Smooth muscle cells
- Enterochromaffin cells
Give six examples of neurotransmitters that can be produced by gut microbiota. (6)
- GABA
- Serotonin
- Melatonin
- Histamine
- Dopamine
- Acetylcholine
Give two molecules that can be produced by gut microbiota that can cause and affect inflammation. (2)
- Nitrate/nitrite/NO
- Hydrogen sulphide
Apart from neurotransmitters and inflammatory mediators, give another type of molecule which is produced by the gut microbiota, and can directly influence the brain. (1)
Short chain fatty acids
True or false? Explain your answer if appropriate. (1)
The gut microbiota is solely made up of many different species of bacteria.
False - also made up of viruses, fungi, yeast, and bacteriophages
Name the four dominant phyla of bacteria making up the gut microbiota. (4)
- Actinobacteria
- Bacteroidetes
- Firmicutes
- Proteobacteria
Actinobacteria is one of the dominant phyla of bacteria making up the gut microbiota.
Give an example of an actinobacteria. (1)
Is this bacteria gram positive or gram negative? (1)
Bifidobacterium
Gram positive
Bacteroidetes is one of the dominant phyla of bacteria making up the gut microbiota.
Give an example of a bacteroidetes. (1)
Is this bacteria gram positive or gram negative? (1)
Bacteroides
Gram negative
Firmicutes is one of the dominant phyla of bacteria making up the gut microbiota.
Give four examples of firmicutes bacterial species. (4)
Are these bacteria gram positive or gram negative? (1)
Clostridium
Staphylococcus
Enterococcus
Lactobacillus
These are gram positive
Proteobacteria is one of the dominant phyla of bacteria making up the gut microbiota.
Give three examples of proteobacteria species. (3)
Are these bacteria gram positive or gram negative? (1)
Escherichia coli (E.Coli)
Salmonella
Helicobacter
These are gram negative bacteria
In general, give three ‘good’ bacteria for the gut microbiome. (3)
- Bifidobacteria
- Escherichia coli
- Lactobacilli
In general, give three ‘bad’ bacteria for the gut microbiome. (3)
- Campylobacter
- Enterococcus faecalis
- Clostridium dificile
How does campylobacter affect the gut? (1)
Most common bacterial cause of diarrhoeal illness, usually from food poisoning
How does Clostridium difficile affect the gut? (1)
Causes diarrhoea and colitis
Describe why the gut brain axis particularly affects serotonergic neurotransmission. (2)
More than 90% of the body’s serotonin is synthesised by the gut microbiota
It then travels to the brain and unbound 5HT can cross the BBB
Give a pathogenic role of serotonin in the following locations. (2)
a) brain
b) gut
a) emotional distress/depression
b) IBS
Complete the sentence relating to the gut brain axis and SCFAs. (3)
Short chain fatty acids produced by the gut microbiota can cross the …………………. and influence ………………….. and ……………………..
blood brain barrier
neuroinflammation
neurogenesis
Give two GBA species which can affect BDNF. Describe how these species affect BDNF. (2)
Bifidobacteria can increase BDNF in hippocampus
Lactobacillus can increase BDNF expression in the brain
How do prebiotics affect BDNF? (1)
Prebiotics can increase BDNF levels in the hippocampus
Give a GBA species that can secrete acetylcholine. (1)
Lactobacillus
Give four GBA species which can secrete serotonin. (4)
- Candida
- Streptococcus
- Escherichia coli
- Enterococcus
Give 2 GBA species which can secrete dopamine. (2)
- Bacilli
- Serratia
Which kind of receptor do short chain fatty acids act on in the gut and brain? (1)
Give three examples of these receptors. (3)
GPCRs
GPR109
GPR41
GPR43
Which cell type in the gut is able to respond to microbiota products and communicate with the brain? (1)
Enteroendocrine cells
Give seven peptides/metabolites that are secreted by enteroendocrine cells in response to the gut microbiota, and are important for signalling in the gut-brain axis. (7)
- Serotonin
- SST (somatostatin)
- GLP-1 (glucagon-like peptide 1)
- GLP-2 (glucagon-like peptide 2)
- PYY (Peptide YY)
- GIP (glucose-dependent insulinotropic peptide)
- CCK (cholecystokinin)
Predominantly in which part of the GI tract do enteroendocrine cells react to the gut microbiota and release peptides to communicate with the brain? (1)
Large intestine
Give eight factors that can affect the composition of the gut microbiome. (8)
- Diet
- Environment
- Antibiotics
- Aging
- Probiotics
- Exercise
- Mode of delivery
- Stress
Complete the sentence relating to the gut microbiome. (2)
The initial microbiota is acquired …………………., and microbiota stability peaks …………………….
at birth
in adulthood
True or false? Explain your answer if appropriate. (1)
The initial gut microbiome is shaped by a variety of both intrinsic and environmental factors.
True
True or false? Explain your answer if appropriate. (1)
Once the gut microbiome reaches its peak stability in adulthood, the composition remains constant and is unable to change later in life.
False - microbiome maintains flexibility to adjust to environmental or dietary changes
Evidence for the influence of the gut microbiota on brain physiology has surfaced mostly from studying germ-free animals.
Describe how neurophysiology is altered in germ-free animals in the following domains. (5)
a) myelination
b) microglia and neuroinflammation
c) blood-brain-barrier
d) neurogenesis
e) a-synuclein
a) increased oligodendrocyte gene expression and myelination in prefrontal cortex
b) altered microglial gene profile with altered cell proportions and an immature phenotype
c) decrease in tight junction protein expression and decrease in BBB permeability
d) increase in hippocampal and amygdala volume
e) Less accumulation of a-synuclein in the brain
Briefly describe how environmental stress is able to alter the gut microbiome. (2)
Environmental stress activates HPA axis,
which releases cortisol, and cortisol affects gut microbiome.
Give two ways in which cortisol affects the gut brain axis. (2)
- cortisol alters composition of gut microbiome
- and alters communication mechanisms between gut and brain
Cortisol is able to impact the gut brain axis by altering communication mechanisms between the gut and the brain.
Give two ways that cortisol can alter communication mechanisms in the GBA. (2)
- Altered gut permeability
- Altered inflammatory pathways
There is a prominent gradient of ‘environmental’ conditions along the length of the GI tract, which determines the density and diversity of microbial species found in a given region.
Give four environmental factors which form gradients throughout the GI tract. (4)
- pH
- oxygen
- Antimicrobial peptides
- Bile salts
In relation to the gut microbiome, is there more bacteria at the proximal or distal regions of the GI tract? (1)
Distal regions
There are two large factors of individual gut microbiome bacteria which determine their effects/outcome on the brain.
Which two factors are they? (2)
- Location of the microbiota within the GI tract
- Specific chemicals produced by the bacteria
True or false? Explain your answer if appropriate. (1)
Changes in the gut microbiome take place over long periods of time (months-years).
False - microbiota composition can fluctuate and change over relatively short periods of time (days)
True or false? Explain your answer if appropriate. (1)
The microbiome composition changes between individuals, and also over time.
True
Very briefly describe how the microbiome is altered with ageing. (1)
Some specific species are decreased with age and others are increased.
Describe briefly how the microbiome composition can be associated with healthy/unhealthy ageing. (1)
Increase/decrease in certain species of bacteria can be associated with healthy/unhealthy ageing
Are changes in gut microbiome composition thought to be a cause or a consequence of ageing? (1)
It is currently unknown
Infection of the intestine with Campylobacter jejuni induces nuclear c-Fos protein expression in which 6 brain regions? (6)
What does c-Fos expression indicate, and what does it suggest about the gut microbiota? (2)
- Lateral parabrachial nucleus
- Locus coeruleus
- Paraventricular nucleus of the hypothalamus
- Amygdala
- Stria terminalis
- Insular cortex
c-Fos expression indicates neuronal activity
suggests that gut microbiota is able to impact brain activity and function
Describe how lipopolysaccharide may be the link between the gut microbiota and Alzheimer’s disease. (4)
LPS is released predominantly from the gut bacteria
LPS can be absorbed from the intestine and get into the blood stream
LPS then transported to brain
LPS levels shown to be altered (usually raised) and location of LPS altered in Alzheimer’s disease
Lipopolysaccharide levels and location are shown to be altered in Alzheimer’s disease, connecting the gut microbiome to AD.
Give two brain regions in particular where there may be higher levels of LPS in Alzheimer’s disease. (2)
- Hippocampus
- Neocortex
Lipopolysaccharide levels and location are shown to be altered in Alzheimer’s disease, connecting the gut microbiome to AD.
Give two proteins which are colocalised with LPS in the brain. (2)
- Amyloid beta (plaques)
- E.Coli proteins (and maybe E.Coli itself)
Given that the gut microbiome has been shown to impact Alzheimer’s pathology, suggest two novel treatments which could potentially attenuate the AD phenotype. (2)
What are trials currently showing regarding these treatments? (1)
Antibiotics
Probiotics
Trials promising so far in terms of improved symptoms.
Give four experimental techniques that are currently being used to investigate the gut-brain axis. (4)
- Germ free animals
- Probiotics
- Antibiotics
- Infection with microbiota
Describe the changes seen in germ-free animals in terms of the following domains. (5)
a) neurotransmitters
b) HPA restrain stress response
c) social behaviours
d) anxiety-like behaviour
e) motor and rearing activity
a) altered expression and turnover
b) exaggerated HPA stress response
c) impaired social behaviours
d) altered anxiety-like behaviour
e) increased motor and rearing activity
Studies using germ-free animals to investigate the gut-brain axis often see alterations in neurological functioning and behaviour patterns.
How can we be sure that these changes are due to the animal being germ-free? (1)
Anomalies are restored after colonisation in a bacterial species-specific manner
An experiment gave aged mice either a faecal transplant from an old mouse or a faecal transplant from a young mouse.
Describe the effects of giving aged mice a young transplant compared to giving them an old transplant. (1)
What can we conclude about the microbiota and ageing? (1)
Those with a young transplant did not show age-associated behavioural deficits.
We can conclude that microbiota composition affects brain functioning associated with ageing.
An experiment gave aged mice either a faecal transplant from an old mouse or a faecal transplant from a young mouse.
Give 6 changes seen in mice with a young transplant, compared to mice with an old transplant. (6)
Give specific examples of three of these changes. (3)
- Altered behaviour (less age-related deficits)
- Restored metabolites
- Altered microbiota composition
- Decreased microglial inflammation (reduced hippocampal activated microglia)
- Altered microglial sensome (altered microglial gene expression)
- Decreased peripheral inflammatory cells and cytokines (reduced IL-10)
Transgenic mice are used to model Alzheimer’s disease.
What effect would you expect to see if a wild type microbiome was transplanted in AD mice, in terms of the following domains? (3)
a) morris water maze
b) Ab-42 load
c) synaptic function
a) better performance on MWM (increased time in target quadrant and increased platform crossings)
b) potentially a reduced Ab load
c) potentially restored synaptic function
In mouse models of Alzheimer’s disease, a wild type microbiome has been shown to restore synaptic function.
They showed this by doing a western blot of 2 proteins that indicate synaptic function.
Give two proteins that they could have measured. (2)
- PSD-95 (post synaptic density protein)
- Synapsin I