Mutations 3 Flashcards

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1
Q

is the human genome generally diploid or haploid

A

diploid

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2
Q

what is the human genome derived from

A

a reference genome made from a sample of lots of people

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3
Q

what type of genes do species share

A

homologous genes

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4
Q

individual humans when compared typically show what percentage identity at genome sequence

A

99.5%

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5
Q

do insertion and deletion mutations affect gene function

A

generally no since they occur outside genes in introns

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6
Q

what are mini-satellites and micro-satellites within VNTRs

A

micro- 1bp to 9bp repeating (short)
mini- 10bp to 100bp repeating
both stable but highly variable in length

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7
Q

where does the variation within CNVs occur

A

within the number of segments within a chromosome (generally a deletion or duplication)

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8
Q

what are the 3 ranges of point mutations

A

private: the 200 de novo point mutations
fairly common: allele frequency of <1% (VARIANT)
very common: allele frequency of >1% (POLYMORPHISM)

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9
Q

what does SNP stand for

A

Single Nucleotide Polymorphisms

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10
Q

what does an SNP do within a nucleotide

A

one set of base pairs are switched with another (A-T goes to C-G)

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11
Q

when can SNPs affect the protein region of a gene

A

if the protein coding gene is: silent (does not affect amino acid), missense (different amino acid is produced) or nonsense (stop codon is formed)

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12
Q

define evolution

A

a change in allele frequency in a gene pool

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13
Q

what is the Hardy-Weinberg equation

A

p2 + 2pq + q2 = 1

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14
Q

what is the function of the Hardy-Weinberg equation

A

it predicts the genotype frequencies that will keep the allele frequencies constant from one generation to the next

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15
Q

within the Hardy-Weinberg equation if the allele frequency does not change what happens to the genotype frequency

A

it will also stay constant at the predicted values

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16
Q

within the Hardy-Weinberg equation what letters represent homozyhous diploids

A

p2 and q2

17
Q

should allele frequencies always be percentages or decimals

A

decimals

18
Q

for most SNPs what ‘rules’ are the human population obeying

A

-random mating
-homogenous population
-mutation between alleles is occuring at a low frequency
-natural selection is not occuring

19
Q

what is the only way to cause evolution with directionality

A

natural selection

20
Q

what is the Variable Number of Tandem Repeats

A

a location in a genome where a short nucleotide sequence is organised as a tandeom repeat

21
Q

what are orthologs

A

genes in different species that orginated from a common ancestor (only separated by speciation)

22
Q

what are paralogs

A

genes formed through duplication, probably with a diverged function and role

23
Q

what is significant about orthologs

A

there is very little evoluton within these genes even across several decades