Module 5.7 - Respiration Flashcards

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1
Q

Stages of glycolysis

A

Phosphorylation of glucose to hexose bisphosphate (2 ATP molecules hydrolysed, each phosphate group added to glucose on 1C and 6C to form hexose bisphosphate, energy released from hydrolysed ATP activates hexose sugar to prevent it being transported outside of the cell)
Splitting each hexose bisphosphate molecule into two triose phosphate molecules (each molecule of hexose bisphosphate is split into 2 3C molecules of triose phosphate)
Oxidation of triose phosphate molecules to pyruvate (dehydrogenase enzymes, aided by NAD, remove H from triose phosphate, producing 2 molecules of pyruvate, 2NAD accept H and are reduced to NADH)
4ATP produced for every 2TP molecules

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2
Q

Net gain of ATP in glycolysis

A

2 as 2 are used for splitting glucose into hexose bisphosphate

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3
Q

Fates of pyruvate

A

Actively transported into mitochondria for link reaction (aerobic conditions)
Converted into lactate (anaerobic conditions)
Converted into ethanol (anaerobic conditions)

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4
Q

Properties of outer membrane of mitochondria

A

Contains protein channels or carriers to allow pyruvate to pass through
Has a similar composition to other organelle membranes

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5
Q

Properties of inner membrane of mitochondria

A

Different membrane structure
Much less permeable to small ions than outer membrane
Folded into cristae to give large surface are
Contains electron carriers and ATP synthase enzymes

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6
Q

Contents of the mitochondrial matrix

A
Enzymes
Molecules of coenzymes NAD
Oxaloacetate
Mitochondrial DNA
Mitochondrial ribosomes
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7
Q

Stages of the link reaction

A

Pyruvate transported across mitochondrial envelope using a transport protein called the pyruvate-H+ symport
Pyruvate is decarboxylated (carboxyl group removed), which causes some CO2 production
It is also dehydrogenated (H atoms removed) to produce an acetyl group
These reactions are catalysed by a multi-enzyme complex called pyruvate dehydrogenase
The acetyl group combines with coenzyme A to become acetyl CoA
The coenzyme NAD becomes reduced

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8
Q

Krebs cycle stages

A

The acetyl group from CoA combines with oxaloacetate (4C) to form citrate (6C)
Citrate is is decarboxylated and dehydrogenated, producing a 5C molecule, one molecule of CO2 and one molecule of NADH
This is repeated to form a 4C molecule
Substrate level phosphorylation occurs between the 4C compound and coenzyme A, producing one molecule of ATP
The 4C compound is dehydrogenated, producing a new 4C compound and FADH
The new 4C compound is rearranged by an isomerase enzyme, further dehydrogenation occurs, producing one molecule of NADH and oxaloacetate

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9
Q

How can other molecules be respired (other than glucose)?

A

Fatty acids - produce acetate
Glycerol - produces pyruvate
Amino acids - deaminated or can be changed into pyruvate or acetyl CoA

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10
Q

How many turns of the Krebs cycle per molecule of glucose?

A

2

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11
Q

Oxidative phosphorylation stages

A

NADH binds to complex I
Releases H atom as H+ and e-
NADH oxidised to NAD
A total of 10H+ can be pumped from matrix to intermembrane space using energy from e- passing along the electron transport chain
FADH binds to complex II
Releases H atom as H+ and e-
FADH oxidised to FAD
A total of 6H+ can be pumped from matrix to intermembrane space using energy from e- passing along the electron transport chain
As protons accumulate in the intermembrane space, a proton gradient forms across the inner membrane
Protons diffuse down the concentration gradient by chemiosmosis through ATP synthase, causing a conformational change in the enzyme, allowing ADP and Pi to combine, forming ATP
Oxygen is the final electron acceptor, combining with electrons coming off the electron transport chain and with protons through ATP synthase, forming water

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12
Q

Net gain of ATP in the Krebs cycle

A

2 as there are 2 turns of the cycle per molecule of glucose

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13
Q

Net gain of ATP in oxidative phosphorylation

A

28

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14
Q

Net gain of ATP in total

A

32

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15
Q

Define chemiosmosis

A

The flow of protons down their concentration gradient across a membrane through a channel associated with ATP synthase

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16
Q

Why is 32 ATP a theoretical yield?

A

Some is used to transport pyruvate into the mitochondria as it is produced in the cytoplasm during glycolysis
Some is used to transport NADH into the mitochondria
Some protons may leak out from the outer membrane of the mitochondria, reducing the amount of H+ which can move through ATP synthase

17
Q

Why is glycolysis the only stage which can take place under anaerobic conditions?

A

Of no oxygen is present it cannot act as the final electron acceptor in oxidative phosphorylation
Therefore electrons do not pass down the electron transport chain so H+ build up in the mitochondrial matrix, reducing the H+ gradient
Therefore NADH and FADH cannot release their H atoms so do not get reoxidised back to NAD and FAD so cannot return to the Krebs cycle
This causes the link reaction to also stop

18
Q

What are the two anaerobic pathways?

A

Ethanol fermentation pathway (fungi, plants)

Lactate fermentation pathway (mammals)

19
Q

Stages of the ethanol fermentation pathway

A

Decarboxylation of pyruvate (releases one molecule of CO2)
Reduction of ethanal to ethanol by ethanol dehydrogenase
Reduced NAD reoxidised to NAD

20
Q

Stages of the lactate fermentation pathway

A

Pyruvate reduced to lactate by lactate dehydrogenase

Reduced NAD is reoxidised to NAD

21
Q

Fates of lactate

A

Converted to pyruvate, which may enter the Krebs cycle via the link reaction
Recycled to glucose and glycogen (gluconeogenesis)

22
Q

Respiratory quotients of carbohydrate/glucose, fatty acids and amino acids

A

Carbohydrate/glucose - 1.0
Fatty acids - 0.7
Amino acids - 0.8-0.9

23
Q

Lipids as a respiratory substrate

A

Hydrolysed into glycerol and fatty acids
Glycerol can be converted into TP (glycolysis)
Fatty acids may contain H atoms so are a good source of H+ and e- for oxidative phosphorylation
Beta oxidation: fatty acids combine with CoA, requires ATP; combined fatty acid and CoA enter matrix from cytoplasm; fatty acids broken down into 2C acetyl group, each combined with CoA; 1 NADH and 1 FADH produced; CoA is released and acetyl group can enter the Krebs cycle

24
Q

Proteins as a respiratory substrate

A

Excess amino acids following digestion are deaminated in the liver
The rest of the amino acid (keto acid) enters respiration as either pyruvate, acetyl CoA, or as oxaloacetate in the Krebs cycle
During starvation protein from muscles can be hydrolysed to amino acids for respiration

25
Q

Mean energy values of glucose/carbohydrate, lipid and protein

A

Carbohydrate/glucose - 15.8 kJ/g
Lipid - 39.4 kJ/g
Protein - 17.0 kJ/g

26
Q

4 factors which affect the rate of respiration

A

Temperature
Substrate concentration
Type of respiratory substrate
Oxygen availability

27
Q

How to carry out a respirometer experiment

A

Place equal volumes of KOH solution in two boiling tubes
Place a gauze basket just above the solution in each tube
Place woodlice into one tube and glass beads into the other
Connect a manometer to the two tubes
Close the screw clip
Use the syringe to make the fluid in the manometer level
Note the manometer fluid level and start a stopwatch
Read off the manometer fluid level at regular intervals