Module 12 Hardy Weinberg Law Flashcards

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1
Q

Principle that states allele frequencies remain constant from generation to generation.

A

Hardy-Weinberg Principle

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2
Q

T/F, according to HW Principle, after the first generation of random mating, genotype frequencies do not remain constant.

A

F, After first generation of random mating, genotype frequencies also remain constant

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3
Q

Assumptions of Hardy-Weinberg Principle (7)

A
  1. Diploid Organism
  2. Reproduce Sexually
  3. Nonoverlapping Generations
  4. Random Mating
  5. Large Population Size
  6. Equal allele frequencies in the sexes
  7. No mutation, migration, or selection
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4
Q

Equation used in calculating genotypic frequencies in progeny

A

p^2 + 2pq + q^2

p: dominant allele freq.
q: recessive allele freq.
p^2= homozygous dom freq.
2pq= Heterozygote freq.
q^2= homozygous rec freq.

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5
Q

How do you calculate for frequency of mating types

A

Multiply p^2, 2pq, and q^2, depending on the parental genotypes.

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6
Q

At what value of p or q is max heterozygosity achieved?

A

When p=q=0.5

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7
Q

T/F a population cannot evolve if it meets the Hardy-Weinberg assumption

A

True

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8
Q

T/F a single generation of random mating produces the equilibrium frequencies of p2, 2pq, and q2

A

True

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9
Q

T/F the heterozygote frequency at equilibrium can be greater than 0.5

A

F, At HWE, Heterozygote frequency never exceeds 0.5

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10
Q

Albinism occurs with a frequency of about 1 in 20,000 in European populations. Assuming it to be due to a single autosomal recessive gene, and assuming the population to be in HWE, what proportion of people are carriers?

A

Given: freq(aa)= q^2 = 1/20,000
Required: freq (Aa)

Solution:
q^2=1/20000-> q=0.007
p=1-q=0.993
freq (Aa) = 2pq
2pq=2(0.007)(0.993)= 0.0139

freq(Aa)=0.0139

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11
Q

Chi-Square Analysis Problem

Jeffrey Mitton and his colleagues found 3 genotypes (R2R2, R2R3, and R3R3) at a locus encoding the enzyme peroxidase in ponderosa pine trees growing in Colorado. The observed number of these genotypes were 135 for R2R2, 44 for R2R3, and 11 for R3R3. Are the ponderosa trees in HWE at the peroxidase locus?

A

Answer with solution and minor explanation of steps in sheets:

bit.ly/Module12Chi-Square-Sample

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12
Q

In cases of di- or multi-hybrid genes, how do we solve for frequency of specific combinations? Let the loci be A and B with alleles A, a, and B, b respectively.

A

Expand the formula and apply product rule.

Locus A:
p^2+2pq+q^2 = 1

p^2=AA; 2pq=Aa; q^2=aa

Locus B:
r^2+2rs+s^2 = 1

r^2=BB; 2rs=Bb; s^2=bb

Multiply the above and add depending on what genotypes/phenotypes are being required.

Ex.
F(A_bb) = F(AAbb+Aabb)
F(A_bb) = (p^2 s^2)+ (2pqs^2)

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13
Q

Multihybrid gene example:
If the frequency of gene A is 0.4, gene b = 0.3, gene C = 0.2 and gene D = 0.5 and the genes are in different chromosomes, what is the frequency at genetic equilibrium of the AaBBccDd genotype?

A

Given: A=0.4, b=0.3, C =0.2, D=0.5
Required: Freq AaBBccDd

Solution:
Let AaBbCcDd=pqrstuvw
A=0.4-> a=0.6; b=0.3->B=0.7; C=0.2->c=0.8; D=0.5->d=0.5

AaBBccDd=(2pq)(r^2)(u^2)(2vw)

2(.4)(.6)(.49)(.64)*2(.5)(.5)

Freq AaBBccDd = 0.075264

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14
Q

For X-Linked genes, how do you get the p and q values for men and women

A

For women: Use HWE p^2+2pq+q^2

For men: Use allele freqs as there is only one X allele p+q=1

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15
Q

Why are recessive X-linked traits more common among males.

A

2 copies of recessive x needed in females, only one for males.

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16
Q

F statistics (Wright’s F-Statistic)

What is the formula for calculating the inbreeding coefficient or deviation from heterozygosity in populations?

A

Fis = 1-(Hi/Hs)

Where:
Fis=indiv w/in subpopulation
Hi=Intrapopulation heterozygosity
Hs= average expected heterozygosity among subpops/

17
Q

F statistics (Wright’s F-Statistic)

What is the formula for calculating individual differentiation (among individuals of the total population)?

A

Fit = 1-(Hi/Ht)

Where:
Fit=differentiation among individuals in a population
Hi=Intrapopulation heterozygosity
Ht= average expected heterozygosity of the total population

18
Q

F statistics (Wright’s F-Statistic)

What is the formula for calculating population differentiation (among subpopulations in the total population)?

A

Fst = 1-(Hs/Ht)

Where:
Fst=differentiation among subpops in a population
Hs=average expected heterozygosity estimated from each subpop.
Ht= average expected heterozygosity of the total population

19
Q

Given two populations with the following genotype frequencies, solve for the Fis, Fit, and Fst values.

Population 1:
AA=0.4; Aa=0.3; aa=0.3

Population 2:
AA=0.6; Aa=0.2; aa=0.2

A

Answer with step by step solution:

https://bit.ly/Module12-FStat-SampleProblem

20
Q

Since Fst shows the differentiation or genetic divergence, how would you interpret the Fst value?

A

Degree of Genetic Differentiation:

Small (Fst from 0 to 0.05)
Moderate (Fst from 0.05 to 0.15)
Large (Fst from 0.15 to 0.25)
Very Large (Fst>0.25)