Misc Flashcards
PNH
Xp22.1
PIG-A gene
Increased proportion of cells missing glycosylphosphatidylinositol (GPI)- linked protein
1q21.1
RBM8A mutation
TAR
Auto recessive
<5% marrow blasts with dysplasia changes
<2% peripheral blasts
Refractory Cytopenia of Childhood
RCC
-hgb<10, macrocytic RBC, plt<150, hypocellular BM (5-10%), micro-megakaryocytes
-rarely involves lymph nodes, spleen, or liver
Mild neutropenia/thrombocytopenia
Exocrine pancreatic dysfunction
Marrow: vacuolated precursors and ringed sideroblasts
Pearson syndrome
Mitochondrial DNA deletion
BRAF
*KIAA1549
*V600E
Low Grade Glioma
KIAA most common for pilocytic astrocytoma
H3 K27M
Common histone mutation in DIPG
Or
High grade gliomas
WT1 11p15.5
Wilms tumor
WT1 + PAX6
WAGR
WT1 exon 8 or 9
Denys-Drash
Kidney diffuse mesangial sclerosis
Wilms predisposition
WT1 intron 9 donor splice site
Frasier syndrome
Wilms tumor predisposition
DIS3L2 gene
Polydactyl
Fetal ascites
Perlman syndrome
Wilms tumor predisposition
ASXL1 gene
Syndromic with intellectual disability
Bohring Opitz syndrome
Wilms tumor predisposition
HR neuroblastoma adolescent
Mutation of tumor?
ATRX
Chromosome remodeling gene, 44% adolescent and adults
ETV6-NTRK3 gene fusion characteristic in what?
Infantile fibrosarcoma
And
cellular congenital mesoblastic nephroma
Germline 22q11.2
Mutation of INI -1 (or SMARCB1)
Assoc with rhabdoid tumor
12:15 tumor translocation
Cellular congenital mesoblastic nephroma (CMN)
11p13
Assoc with WAGR
TP53
Anaplastic wilms
Germline mutation chromosome 3
Von Hipple-Lindau
Risk for renal cell carcinoma (which is also assoc with FH-tumor predisposition syndrome)
BCOR internal tandem duplicates
Clear cell carcinoma of the kidney
Inversion of intron 22
Bleeding
Severe hemophilia A
Most common mutation
Iron refractory iron deficiency anemia
Mutation?
TMPRSS6
(Homozygous deletions of both Matripase-2 genes)
Hereditary hemochromatosis
Mutations?
C282Y - most common HFE mutation
H63D - another HFE mutation but less common
More rare:
TFR2
FPN1
HAMP
Primary erythrocytosis
Mutation?
Erythropoietin receptor mutation = EPOR
Pathogenic variants in PTPN11
Noonan syndrome
Lynch syndrome
Non-polyposis colon cancer
MLH1
PMS2
Pathogenic variant SHDx
Pheochromocytoma
DICER1
Pleuropulmonary blastoma
Papillary thyroid cancer
Ovarian sex cord tumor +thyroid nodules
Sertoli-Leydig cell tumor and gynandroblastoma
Pineoblastoma
Pituitary blastoma
LiFraumeni Syndrome
TP53
Low hypodiploid ALL
Osteosarcoma
Anaplastic embyonal rhabdomyosarcoma
Anaplastic Wilms
Choroid plexus carcinoma
SHH Medulloblastoma
Adrenal corticocarcinoma
NBEAL2
Grey platelet syndrome
Somatic mutation assoc with CLOVES
PIK3CA
Also seen in Klippel-Trenaunay, and fibro-adipose vascular anomalies
CLOVES= congenital lipomatous overgrowth, vascular malformations, epidermal nevi, skeletal/spine abnormalities
AKT
Proteus syndrome
H3.3 G34R
High grade glioma less common histone mutation
Typically in cerebral hemispheres, teenagers and young adults
Medulloblastoma
WNT
Excellent prognosis
Genetic aberration: monosomy 6, nuclear beta-catenin
Medulloblastoma
Group3
Poor prognosis
Genetic aberration: i17q, MYC amplification
Medulloblastoma
SHH
Fair prognosis; poor of assoc with TP53
Genetic aberration: PTCH1/SMO/SUFU, GLI2
Germ cell tumors
Germinomas = non-secreting
Non-germinomatous germ cell tumors = secreting, worse outcome. +AFP and beta-HCG
Suprasellar/pituitary or pineal or both
Supracellar/pituitary tumor
Mixed solid&cystic mass
Squamous epithelium lining cystic cavity - often containing calcium and keratin
Craniopharyngioma
LCH molecular pathogenesis
BRAF-V600E
HLH cytotoxicity genes
PRF1
UNC13D
STX11
RAB27A
STXBP2
AP3B1
MUNC13-4
Auto recessive, familial HLH assoc with homozygous defects
HLH EBV assoc
Assoc with XLP: SH2D1A = XLP 1, XIAP, BIRC4 = XLP 2
More recently assoc with X-MEN syndrome (MAGT1)
Osteosarcoma predispositions
RB1
TP53
RECQL4 - DNA helicase/Rothmund-Thomson syndrome
Bone damage
NOTCH signaling accelerates
RB1 gene chromosome
Chromosome 13q14
A tumor suppressor gene
Assoc with MYCN amplification has worse outcomes
Genetic assoc with mediastinal germ cell tumor
Klinefelter syndrome (47XXY)
Genetic syndromes assoc gonadoblastoma/dysgerminoma
Swyer syndrome (46XY)
Turner syndrome (47XO)
Fraiser syndrome (WT1)
Germ cell tumors typically assoc with age <11yrs
Teratoma or yolk sac tumors
Category of Germinoma
Seminomas (testes)
Dysgerminomas (ovary) -may have elevated PLAP
Germinoma (extragonadal)
Category of Non-germinomas
Yolk sac - components of embryonic and extra embryonic endoderm
Embryonal carcinoma - undifferentiated cells
Choriocarcinoma - trophoblastic differentiation
GCT assoc with elevated serum AFP
Yolk sac ++++
Embryonal carcinoma +/-
Immature teratoma +/-
GCT assoc with elevated bHCG
Choriocarcinoma ++++
Embryonal carcinoma +/-