Midterm Flashcards
What characteristics are considered in classifying viruses?
host range, virion morphology, nucleic acid type, specific genes, phylogenetic groupings
What is the suffix for phylogenetic order?
ales (virales)
What is the suffic for subfamily?
inae (virinae)
What is the suffix for genus?
virus
What are the steps in viral replication known as the “eclipse” phase?
uncoating –> assembly
Which viral families an replicate in either the cytoplasm or nucleus?
retroviruses, hepadnaviruses
Which types of viruses replicate in the nucleus?
most DNA viruses and orthomyxo (exception: pox)
What types of viruses replicate in cytoplasm?
most RNA viruses and pox
What two virus families have a ssDNA genome and replicate using host DNA replication system?
circo and parvo
What are the two important RNA dependent RNA polymerases? What do they do?
replicase - copies viral RNA to produce progeny genomes
transcriptase - produces mRNA
What kind of replication system is retroviruses?
SS + RNA with DNA intermediate (integrates into host genome)
What are the 3 enzymatic activities of reverse transcriptase?
- RNA dependent DNA polymerase
- RNase H activity (degrades RNA from RNA/DNA hybrids)
- DNA dependent DNA polymerase
What step is required right before a virion becomes infectious?
cleaving Gag and Gag/Pol polyproteins
What is the definition of a quasispecies?
source of phenotypic variants that can rapidly respond to selective pressures by shifting population composition
What are the 4 determinants of tissue tropism?
susceptibility, permissivity, accessibility, defense
What are the 3 main functions of Type 1 interferons?
resistance to viral replication
increase MHC class 1 and antigen presentation
activate NK cells
How does the virus entering cell turn on the antiviral response?
TLRs –> IFNs –>ISGs –> Antiviral response
What cell types do DNA viruses “transform”?
primary non-permissive
What cell types do RNA viruses transform?
permissive or non-permissive
What types of oncogenes are involved in DNA virus transformation?
unique early viral genes, essential for replication
What types of oncogenes are involved in RNA virus transformation?
c-onc or homologue (v-onc), non essential for replication
What is the MOA of transformation with DNA viruses?
inhibit stop signals, inactivates TSP
What are the 2 MOA of transformation in RNA viruses?
activate go signals
- transduction : v-onc
- insertional mutagenesis: near c-onc
How does the interaction of transformation differ between RNA and DNA viruses?
RNA = steady state productive
both can be non-productive or integration
What is the cell tropism for parvo?
crypt cells and myeloid system cells (panleukopenia)
What is the pantropic form of parvo in neonatal dogs and cats?
dogs - myocardium
cats - cerebellum
What problems does parvo porcine virus cause?
infertility
>30 days –> mummification
What does the DsDNA of circovirus code for? (genomic and cdna strand)
genomic strand –> replication enzymes
CDNA strand –> encodes capsid
How does circovirus differ from parvo in assembly?
circo assemblies in cytoplasm
What is the cell tropism for circovirus?
lymph nodes
respiratory tract
How is PCV2 transmitted?
vertical (other circos are horizontal)
What is needed for viral clearance of PCV2?
cell mediated immunity
What syndrome is caused by porcine circovirus type 2?
post weaning multisystemic wasting syndrome
What other virus can PCV2 be synergistic with?
porcine parvo
What are the non permissive cells in the skin?
undifferentiated –> dermal/basal
What are the permissive cells in the skin?
differentiated –> keratinizing layer
How does the papilloma virus get into daughter cells in the skin?
episome sits in basal cell and is transmitted to daughter cells
What causes equine sarcoids?
bovine papilloma virus 1 or 2
What is the MOA of amantidine and rimantidine?
ion channel locker –>penetration inhibitor (prevents influenza virus from uncoating)
What drug is a nucleoside analog?
acyclovir
What drug is a pyrophosphate analog?
foscarnet
What viruses may be affected by foscarnet?
some DNA and RNA viruses (herpes and retro)
What drug is a reverse transcriptase inhibitor?
AZT (zidovudine)
What are the 3 protease inhibitors?
ritonavir, saquinavir, indinavir
What is the MOA of protease inhibitors?
blocks polyprotease –> the gag-pol polyprotein processing of retroviruses
What is the MOA of oseltamivir andd zanamivir?
neuraminidase inhibitor –> alteration of particle aggregation and release (keeps virus from budding)
What are the virus characteristics for adenoviridae?
ds DNA, nonenveloped
What are the epitopes of adenovirus that determine species specificity?
pentamers (vertices of capsid)