Midterm 2 Flashcards
What is the equation for photosynthesis?
6CO2 + 12H2O (light energy) –> C6H12O6 + 6O2 + 6H2O
What are the two reactions involved in photosynthesis?
Light and dark reactions
Where do the two reactions of photosynthesis occur?
Light reaction –> thylakoid membranes
Dark reaction (Calvin cycle) –> stroma
What is the stroma?
The liquid center in chloroplast
Where do the thylakoid membranes exist?
In chloroplasts
Electromagentic spectrum
All types of electromagnetic radiation such as UV light, X rays, gamma rays, etc.
What are pigments plants use?
Chlorophyll a and b, and beta-carotene.
What are pigments?
Proteins that are light absorbing molecules (only specific wavelengths and reflect others).
Absorption spectrum
Set of wavelengths absorbed by a pigment
What colour are we seeing when we look at leaves (in terms of the absorption spectrum)?
The reflected wavelengths, thus chlorophyll a/b reflect large amounts of green and yellow (most abundant pigment masking others).
What gives the orange colour of leaves?
Chlorophyll a and b break down in the fall, but amounts of B-carotene remain that reflect orange.
What are the components of mesophyll tissue?
Two mesophyll cells: palisade and spongy cells; stoma; and vascular bundles.
What is the purpose of cuticle in plant leaves?
A waxy component that covers the outermost layer of plants protecting it from its environment (temperature and drought).
List the components of a chloroplast.
Double membrane (outer and inner), thylakoid (flattened sacs), granum (stacks of thylakoid), and stroma (fluid part). There is a double membrane of the thylakoid with a thylakoid space in between.
What are the components of the photosynthesis process?
Electrons pass through PS II, then PS I, and then CO2 is fixed by RUBISCO and sugar is produced.
Where is the photosystem located?
The thylakoid membrane.
What are the two components of a reaction center complex?
Chlorophyll a molecules and a primary electron acceptor
Explain the general process of a photosystem.
Pigments absorb incoming photons (light) and a light-harvesting antennae complex (loads of pigments) transfers it to adjacent pigments until it reaches the reaction center complex. Here the energy reaches a chlorophyll a molecule, which excites an electron moving to the primary electron acceptor and then the electron transport chain.
What is cyclic photophosphorylation?
The continued cycle of using photons (continuously absorbed by pigments) to phosphorylate an ADP to make ATP.
What is the purpose of P680 and P700?
Is the wavelength that each photosystem absorbs best at.
What happens after the electron leaves the primary acceptor?
It gets passed down an electron transport chain where it loses energy it time.
What happens to the energy that the electron loses as it moves down the electron trasnport chain?
Used to make ATP or NADPH
What reactions are the electrons involved in the photosystems?
Redox reactions.
OIL RIG
Oxidation is losing electrons while reduction is gaining electrons.
What is the first redox reaction in photosystem 1?
An oxidized form of Fd is given high energy from the electrons to turn it into a reduced form.
What is the second redox reaction in photosystem 1?
The reduced form of Fd + oxidized NADP+ + H+ transfer electrons to make an oxidized form of Fd and reduced NADPH (2 more high energy electrons).
What type of photophosphorylation occurs when there are two photosystems?
Non-cyclic photophosphorylation as an electron supply must be made for the reaction center complex (as it’s sent to PSI).
What are the products of the two photosystems?
PSII = ATP
PSI = NADPH
(both energy rich molecules)
How is an electron supplied to PSII?
Hydrolysis of H2O (1/2O2 + 2H+ + e-)
What is the optimal wavelength of PSII?
P680
What is the optimal wavelength of PSI?
P700
What electron acceptors are involved in PSI?
Fd and NADP+ reductase
What electron acceptors are involved in PSII?
Pq, cytochrome complex, and Pc (passes e- to PSI).
How do the two photosystems work together?
- pigments of PSII absorb and transfer photons until they reach P680 (reaction center complex)
- simultaneously electrons are supplied to P680 by the hydrolysis of H2O
- excited e- passed through electron transport chain of PSII until it reaches P700 (PSI) - ATP is made
- PSI has pigments that absorb photons to excite the electron it received which is then passed down an electron transport chain where NADPH is made
What is photophosphorylation?
The use of energy from photons (light) to phosphorylate molecules (add P to ADP = ATP).
Where is the concentration gradient in the chloroplasts?
Thylakoid space has a high concentration of H+ while the stroma has a low concentration.
How does H+ move into the thylakoid space?
An integral protein uses the energy lost from the passing electron to transport H+ from a low to high concentration (active transport).
How does H+ move back into the stroma?
An integral protein, ATP synthase, allows H+ to move from high to low concentrations (facilitated diffusion).
What happens when the H+ is transported by ATP synthase?
Energy is released from this now reduced concentration gradient, thus turing ADP + P into ATP.
What is the purpose of RUBISCO in the Calvin Cycle?
Allows 6CO2 (single carbon) and 6 RUBP (five carbon) to bind to each other.
What do 6CO2 and 6 RUBP form?
Forms 3 carbon molecules of 12 PGA (lowe energy), due to the larger molecules breaking down from instability.
What is the PGA molecule provided with?
12 ATP and 12 NADPH to provide energy
What does PGA form when energized?
12 3 carbon PGAL molecules
What happens to the PGAL molecules?
10 go on to be energized by 6 ATP to form 6 RUBP again (5 carbons) and 2 form a six carbon molecule, known as glucose.
How much energy is needed to make glucose?
18 ATP and 12 NADPH
What is the problem with RUBISCO?
It can bind to oxygen as well thus decreasing its efficiency in photosynthesis (reduces the amount of CO2 that can combine to form glucose).
What is the transpiration-photosynthesis compromise?
A balancing mechanism with the stoma to allow for enough water to leave cell (also staying to keep cells turgid) and enough CO2 to enter.
Where are most stomata located? Why?
Under a leaf because it’s away from the sun so that it reduces the amount of H2O that will leave (drain and wilt leaf).
What time of day does the stomata open?
Daylight as it provides photons for light energy. Early morning as well since not too much light to fully drain the plant.
What time of day does the stomata close?
At night because no sunlight to pull water out.
How do C4 result in more efficient photosynthesis?
Takes in CO2 from a mesophyll cell, specifically the stomata, and converts it into a 4 carbon compound where it’s taken to a different cell (bundle-sheath cells). There is a lower concentration of oxygen here, thus RUBISCO works bette (C4 back to CO2).
Where do C4 plants exist? Give an example.
In warmer conditions.
ex. sugarcane
How do CAM plants work?
They keep their stomata open during night (allow CO2 to come in) to make a C4 compound and during daytime it closes so that a high concentration of CO2 remain near RUBISCO for photosynthesis to occur.
Where are CAM plants located? Give one example.
In hot and very dry environments.
ex. pineapple and cacti
What the chemical formula for cellular respiration?
C6H12O6 + 6O2 –> 6CO2 + 6H2O + ATP
Photolysis
Breakdown of water with light
Where does cellular respiration occur?
Mitochondria
What is the purpose of cristae in mitochondria?
Highly folded to increase SA for cellular respiration.
What exists between the double membrane in mitochondria?
Intermembrane space
How much ATP are made in total during cellular respiration?
36 ATP
Where does glycolysis occur?
In the cytoplasm.
Where does the CAC occur?
Matrix of mitochondria.
Where does oxidative phosphorylation (electron transport chain and chemiosmosis) occur?
Across the inner membrane of mitochondria.
What enzymes are important in cellular respiration?
NADH and FADH2
What are the reactants of glycolysis?
Glucose (6C molecule), 2ATP, 2NAD+, and 4ADP
What are the products of glycolysis?
2 molecules of 3C pyruvate, 2 ADP, 4 ATP, and 2 NADH
What is pyruvate oxidation?
A grooming step before CAC to reduce a 3C pyruvate to a 2C acetyl-CoA.
What are the reactants in pyruvate oxidation?
2 pyruvates, 2 NAD+, 2CoA.
What are the products of pyruvate oxidation?
2 NADH, 2 acetyl-CoA and 2 CO2.
What are the products of CAC?
6 NADH, 2FADH2, 4 CO2, and 2 ATP.
What are the reactants of CAC?
2 molecules of 2C acetyl-CoA.
What type of phosphorylation does glycolysis and the CAC use?
Substrate-level phosphorylation.
Substrate-level phosphorylation
The production of ATP from the transfer of a phosphate group from a substrate to ADP.
What is the final electron acceptor in the ETC?
Water, from the formation of oxygen and H+.
Explain the ETC.
Uses electrons from reduced NADH and FADH2 to pass along to each electron carrier molecules (protein) in the folds of the cristae, where the energy lost from the electron is used to power H+ across the membrane from ATP synthase to phosphorylate ADP.
How many electron carrier molecules are there?
Five
Oxidative phosphorylation
A process in which ATP is formed from electron transport from NADH and FADH2 to oxygen.
Chemiosmosis
Movement of ions across a membrane along the concentration gradient (high to low).
Where does chemiosmosis occur?
In ETC where there is a higher concentration of H+ in the intermembrane space, thus using energy to pass it through ATP synthase to lower H+ concentrations in the matrix, where ATP is simultaneously made.
How many ATP does NADH yield? Exception?
3 ATP, but in glycolysis the NADH made produces 2 ATP.
How many ATP does FADH2?
2 ATP
When was the transition to agriculture?
10,000 years ago
Agriculture
The science or practice of farming, including the cultivation of the soil for growing crops.
What problems were associated with hunting-gathering?
Needed to allows be mobile to get food; sometimes unreliable sources depending of yield, time of day or year; and needed an expertise in plants/collecting of them.
How were origins of agriculture identified?
These areas have a stable supply of food where explorers looked for dumping sites (food waste proved what they ate and if domesticated or wild products).
What is the difference between Old and New World?
Old World was Afro Eurasia where the explorers believed it was the only part of the universe until they ventured and discovered the Americas (New World).
What were the different origins in the Old World? Most important?
Near east, like the Fertile Crescent which was one of the most important origins, and the far eat for Yellow River Basins.
What were origins in the New World?
Eastern North America, Mesoamerica, and South American Highlands.
Agricultural revolution
A change due to noticing that crops will grow if seeds are planted, thus producing a rapid and dramatic change in human lifestyle.
Cultural evolution
A change due to a gradual inclusion of farming with hunting-gathering (forming food-collection strategy), with an increased reliance on plant cultivation over time.
Which revolution suggested evidence for the switch to farming?
A closer look at the time scale indicates existence of transitional stage as required by cultural evolution.
Why was there a switch to farming?
Farming allowed communities to grow and prosper, thus overtaking the small groups formed for hunting/gathering.
Why is it important to know the origins of plants?
Avoids inbreeding depression of domesticated plants because we grab genes from the original plants, resulting in hybrids (no deleterious recessive alleles).
What is the difference between shattering and non-shattering heads?
Shattering heads means that grains can easily come off the main head, resulting in poor collection, while non-shattering heads are almost stuck to the main head, thus easier collection.
How does the dormancy period compare in wild and domesticated barley?
Wild barely have a dormancy period, thus they can only be grown at certain times whereas domesticated barley don’t have a dormancy period, thus growing whenever.
How does the size and number of grains compare in wild versus domesticated barley?
Since we want mass production, domesticated barley has more grains that are larger than wild ones.
What family do all grass members belong to?
Poaceae family
What are the types of inflorescence on grasses?
Spike or panicle.
What is inflorescence?
An arrangement of a cluster of flowers.
What is a spike inflorescence?
Non-existent or no real stem, so that CLOSED flowers are directly attached to the stem.
ex. wheat, barley
What are panicle inflorescence?
Branching off the main stem of OPEN flowers that are connected by a pedicel, so they are multiple flowers off one pedicel.
ex. oats
Explain the composition of a leaf and stem in grass plants.
A monocot with parallel veined leaves and a hollow stem.
Explain the composition of a root system in grass plants.
Fibrous root systems due to being a monocot.
Monoecious
Female and male reproductive parts exist in the same plant (can be on different flowers)
ex. corn
What is corn an imperfect plant?
Only has one reproductive system.
How many florets does a spikelet in grass plants contain?
1-12
Stolon
A horizontal stem in a grass plant that exists above ground.
Rhizome
A horizontal stem in a grass plant that exists underground.
What does a floret contain?
An awn, lemma, palea, stamen, and stigma.
What are glumes? Where do they exist?
Underneath a floret to protect them.
What is the purpose of the lemma and palea?
2 coverings that protect the reproductive parts inside a floret.
How many stamen does a grass plant contain within a floret?
3
How many stigma does a grass plant contain within a floret?
2
What does an ovary in a grass plant give?
A grain
What are the components of a grain?
Endosperm (large makeup), embryo/germ (small part), aleurone layer, and fused seed coat and fruit wall.
What does an aleurone layer do?
Contains enzymes that are needed for development of the plant.
What type of inflorescence does wheat contain?
Spike
What is a grain?
Fruit containing a seed that produces one cotyledon.
Why do the nutritional values in wheat flour and refined flour differ?
Refined flour is produced from just the endosperm while wheat flour is produced for the whole grain (+germ), so that all nutrients are provided.
What is the purpose of white enriched flour?
Puts nutrients back into refined white flour, to bring it’s losses back up.
What type of speciation occurs during the evolution of wheat?
Sympatric speciation
Sympatric speciation
Species have a reproductive barrier so that they can’t interbred, but there is no physical barrier that separates them (in close proximity).
Allopatric speciation
A population becomes separated by a geographic barrier, thus reproductive isolation occurs and it results in two new species.
Polyploidy
An organism has more than one full set of chromosomes.