Midterm #1 Flashcards
What is consciousness
The state or quality of awareness (awareness of thoughts, perceptions, memories, and feelings). The state of awareness creates a subjective experience. Anything capable of having a subjective experience is conscious.
The split-brain operation
Outdated surgical approach for treating seizure disorder (epilepsy). Involves cutting the corpus callosum. The hemispheres can’t communicate directly with one another. Coordinated movement is still possible thanks to the brainstem and spinal cord.
Corpus callosum
The bundle of white matter tracts connecting the left and right hemispheres.
Cerebral Hemispheres
Consciously process sensory information (sights, sounds, touch), and initiate purposeful movement (hand and leg movements). Some lateralized function (controlled primarily by a single hemisphere), but the nerve fibres mostly crisscross.
Left brain functions
Control of muscles on right half of the body. Complex language comprehensions, speech, writing. Processing right half of visual field.
Right brain functions
Control of muscles on left half of the body. Limited language, small ‘dictionary’. Processing left half of visual field.
Left and right visual fields and fixation points
When focusing on a fixation point, vision is divided into a left and right visual field. The left visual field is processed by the right half of each eye, and the right visual field is processed by the left half of each eye.
Nasal half of visual information and brain hemispheres
Nasal half of visual information (the half closer to the midline) crosses over at the optic chasm. Left hemisphere of brain processes right visual field. Right hemisphere processes left visual field.
Cutting The Corpus Callosum
The corpus callosum enables the two hemispheres to share information so that each side known what the other side is perceiving and doing. If it is cut, the two hemispheres cannot directly talk to each other. However, they can still send information towards (to the brainstem and spinal cord) to control muscles.
The role of lower brain areas after receiving info from corpus callosum
They process information beneath conscious awareness, and they help coordinate movements by integrating the information they receive from the two cerebral hemispheres.
Dilemma of the split brain patients
Some patients began to say that their left hand had a mind of its own. It seemed that the left hand of split-brain patients was controlled by processes outside their conscious awareness. The right hand, controlled by the left brain, never acted out of the ordinary. Its actions were always consistent with the person’s conscious intentions.
Studies on Split Brain Patients: Touch
When a split-brain patient closes their eyes and touches a familiar but unidentified object with their left hand, they cannot identify the object out loud.
Studies on Split Brain Patients: Vision
When a split-brain patient sees an image only in their left peripheral vision, which is processed on the right side of the brain, they cannot verbalize what they see. Split brain patients cannot say out loud something that only the right brain sees.
Gazzaniga’s Interpreter Theory
In experiments with split brain patients, researchers give a visual command to the nonverbal right brain. Then ask the patients to verbally explain why they had done that thing. The left brain would create a story to explain the behaviour. Gazzaniga theorized that this is how unified conscious experience arises. Our behaviour is out of our control. the left brain develops a meaningful narrative through which we can understand our experiences.
Mind-Body Dualism
While the body may be a mechanical device and the world deterministic, the mind (or soul) is something else, something immaterial that exists outside the body.
Cartesian impasse
If the movement of all atoms can be well explained by the physical laws of nature, how can our immaterial souls control our material bodies?
What are atoms
Atoms are made of protons, neutrons, and electrons. Every element is a type of atom. Atoms can bond to form molecules. In an atom or molecule has a charge, it is an ion.
What are molecules?
Atoms interact with each other when it improves their ability to balance out or distribute their electrical charge. The sharing of electrons: covalent bon. A molecule is two or more atoms connected with covalent bonds. Covalent bonds do not break apart in water.
What are salts?
Atoms interact with each other when it improves their ability to balance out or distribute their electrical charges. When an atom or molecule has a net electrical charge (+ or -) we call it an ion. Negatively charged ions can donate an electron to positively charged ions, creating an ionic bond.Atoms and molecules connected with ionic bonds are Calle salts. Salts dissolve in water because ionic bonds break apart in water.
CHNOPS
Carbon, hydrogen, nitrogen, oxygen, phosphorus, and sulphur. These atoms represent the six key chemical elements whose covalent combinations make up most of the biological molecules on Earth.
The CHNOPS form 5 main molecules
Water, Sugar, Fat (lipids), Nucleic acids, Amino acids.
RNA
Single stranded chain of nucleic acids. Fragile. Strands of RNA can naturally fold into complex 3-dimensional shapes, and some of them can catalyze chemical reactions.
Ribozymes
Subgroup of RNA that can catalyze chemical reactions. Thought to give rise to first life on Earth.
Two main problems with ribozymes (molecules of RNA)
1) RNA is fragile. Breaks apart easily.
2) RNA is made of 4 different types of nucleotides that are not particularly abundant on planet Earth.
DNA
Double stranded chain of nucleic acids. Stable. In eukaryotes, stored safely in the nucleus. Primary storage of genetic info today.
To make a quality cell, you need a quality membrane.
Hydrophilic (water loving) phosphate head. Hydrophobic (water hating) lipid tail. The structure makes diffusion (movement) across the membrane difficult - a good thing if you want an enclosed cell.
Prokaryotic cells
Single cell organisms. Cell membrane filled with cytoplasm. DNA, RNA, and ribosomes floating around.
Eukaryotic Cells
Single - or multi-celled organisms. Contains organelles like mitochondria and nucleus. Can now store DNA and create energy.
Proteins
Proteins are what do things in a cell. Proteins are chains of amino acids. They are considered macromolecules (big).
Protein Synthesis
- A segment of DNA in the nucleus is unraveled and a complementary strand of RNA is created (mRNA).
- mRNA leaves the nucleus.
- Ribosome latches onto mRNA, recruits tRNA to creatre complementary amino acids.
- Amino acids are added to a growing chain that eventually breaks off and folds into a protein.
Ribosome
A molecular machine that is made of RNA and proteins. Ribosomes have perfected the synthethis of new proteins by stringing together the amino acids held by tRNA molecules in the order determined by free-flowing strands of mRNA.
Why is DNA so important
Because RNa is not stable it breaks apart too easily to be useful for long term information storage. DNA is much more stable and durable than RNA. DNA and RNA are complementary, so it is easy to transcribe one into the other. For long term info storage, cells evolved to use DNA instead of RNA.
Phospholipids and the cell membrane
Phospholipids are strands of fat (lipids) with a phosphate cup. Lipids prefer the company of other lipids. Phosphate caps prefer to interact with water. Phospholipids form bilayer sheets if left understated (in water), and form micelles when shaken (soap bubbles). Under the right conditions, micelles can pop and reform as liposomes. The cell membrane is basically a liposome. Diffusion through the phospholipid bilayer is limited. Inside and outside are salt water.
The Eukaryotic Cell Body (SOMA)
The cell body (or soma) of a cell is where its nucleus is located. Filled with cytoplasm, mitochondria, membrane, microtubules.
Cytoplasm
Water filled with salt, sugar, nucleic acids, and amino acids
Mitochondria
Semi-autonomous double membrane-bound organelles. Powerhouse of the cell because they generate ATP, the cell’s main source of chemical energy.
Cell membrane
Defines the boundary of the cell. It consists of a phospholipid bilayer that is embedded with proteins.
Microtubules
Allow for rapid transport of material within the neuron.
Multicellular organisms
Consist of more than one cell. In multicellular organisms, cells specialize to perform distinct functions. All cells within these organisms have the same genome (same collection of DNA), but they read different parts of it.
Crystallization
Process of atoms or molecules arranging into a well-defined, rigid crystal lattice in order to minimize their energetic state. Water molecules crystallize when they freeze, and the unique way they arrange themselves causes ice to be larger than water.
What is a neuron
Specialized type of cell that is electrically excitable. Neurons send electrical and chemical signals that permit fast communication.
Reticular Theory of a neuron - Golgi
Believed that the brain was a physically connected network
Neuron Doctrine theory of a neuron - Cajal
Believed that the brain was composed of individual cells communicating.
Neuron Anatomy
- Soma (cell body): Location of the nucleus and other organelles.
- Dendrites: sites for receiving chemical or sensory input
- Axon: Electrical signals (action potentials) are sent down the axon. Only one axon, but that axon can branch many times.
- Axon terminals: End of axon, where the action potential triggers the release of neurotransmitter.
Phospholipid bilayer of a neuron
Cell membrane. Ions cannot move across it. Filled with Cytosol: salty water-like solution. Filled with potassium, chloride, and sodium.
Voltage of a Neuron
Difference in electric charge between two points - the electrostatic potential between two points. When there is some voltage, it makes charged particles want to move to neutralize the charge difference. Cell membranes prevent this from happening. Measurements of voltage are always relative: the extracellular fluid of the brain is always considered to have a charge of 0mV.
Resting membrane potential of neurons
Relative to the extracellular fluid (mV), neurons have a resting membrane potential of -40mV to -90mV. This means that the voltage across the membrane makes positively charged ions want to enter the cell and negatively charged ions want to leave the cell.
How do neurons communicate? (Electrically vs. chemically)
Electrically: Relies on membrane potential (Vm = difference in charge between inside and outside of cell). Within a cell.
Chemically: Relies on neurotransmitter release from axon terminal onto other neurons. Between cells.
Ions
An atom or molecule that has a net electrical charge. Move around freely in water.
Cations: positively charged. (Na+, K+ (more abundant inside cell), Ca2+, Mg+)
Anions: negatively charged. (Cl-)
Why do neurons have an especially negative membrane potential?
To be able to communicate very quickly from on end of the cell to the other. They need a way to pass info down the length of axons very quickly.
How do neurons create an electrical potential across their membrane
Using two proteins: 1.
Sodium potassium pump
2. Potassium leak channel.
Two other proteins used in an action potential
- Voltage gated sodium channel
- Voltage gated potassium channel
Protein that action potentials trigger the release of
Voltage-gated calcium channel
The Sodium-Potassium Pump
Sets the concentration gradient; sends Na+ out of cell, and K+ into cell. Makes the concentration of K= ions 30x higher inside the cell than out. Makes the concentration of Na+ ions 15x more concentrated outside the cell than in. These concentration gradients never change.
The Force of Diffusion
If there is a concentration gradient and no forces or barriers in the way, then atoms and molecules will move, on average, from regions of high concentration to regions of low concentration.
Potassium Leak Channels
Permanently open ion channels that freely let K+ ions enter or leave the cell. Since K+ ions are 30x more concentrated inside the cell than out, they are more likely to leave the cell (diffusion). The force of diffusion competes with the force of electrostatic pressure. K+ ions leave the cell because of diffusion, but enter the cell because it is negatively charged inside relative to outside. These forces become equal and opposite when the membrane potential falls to -90mV.
The balance of diffusion and electrostatic energy
When a neuron’s membrane potential equals -90mV, there is no net movement of K+ ions: the amount leaving = the amount entering. When it is less negative than -90mV, diffusion outcompetes electrostatic pressure and more K+ ions leave the cell. When it is more negative than -90mV, electrostatic pressure wins and more K+ enters the cell than leaves.
The Resting Membrane Potential
The resting membrane potential of most neurons is typically between -40 and -80 mV, because other ions (primarily Na+) continuously flow into neurons through other types of ion channels and pumps. But it is the permeability of the membrane to K+ ions that largely determines the resting membrane potential. When a neuron opens up more K+ channels, the membrane potential falls closer to -90mV, when a neuron removes some K+ channels from the membrane, the membrane potential becomes less negative.
Ion Channel Receptors
The dendrites of most neurons are full of receptors that are ion channels. When activated, these receptors change shape and open a pore through which ions can flow, in or out. When these receptors get activated, the gate briefly opens, allowing specific ions to flow through the pore of the ion channel receptor.
Membrane depolarization
When the membrane potential of a cell becomes less negative than it normally is at rest. Thea activation of a receptor that allows positively charged Na+ ions to enter the cell will depolarize the membrane.
Changes in the membrane potential
Changes are always transient (short lived). Neurons are quick to return to their state because K+ leak channels are always open. The abundance of K+ leak channels ensures that neurons never deviate from their resting membrane potential for very long.
The Voltage-Gated Sodium Channel
At rest, the electrically charged gate is pulled closed by the negatively charged interior of the cell. But if Na+ comes in through an activated receptor, depolarizing the membrane, this gate may not stay closed. Thegate opens when the membrane is depolarized to about -40mV. The open pore allows NA+ ions to rush into the cell, further depolarizing the membrane. A receptor started the depolarization. Voltage-gated Na+ channels continue it. The gate opens for no more than half a millisecond before the pore becomes clogged by a ball on a chain. This ball will clog the pore until the membrane potential gets back down to -70mV (takes another half millisecond).
The action potential
A brief electrical impulse that propagates down the axon. A rapid change in the membrane potential that travels down the entire length of the axon due to the opening of voltage-gated sodium channels.
Threshold of excitation
The value the membrane potential must reach to trigger an action potential is called the threshold of excitation.
What starts an action potential?
We now have a negatively charged cell - positive ions want to come in because of electrostatic pressure. Sodium also wants to come in to move down the concentration gradient. There will be a depolarization stimulus: receptor binding opens ion channels, allowing initial influx of Na+.
Voltage-gated Potassium Channel
Opens during the upswing of the action potential (~0mv); responsible for return to baseline Vm. When they open, the cell membrane is more permeable than ever to K ions. The outward flow of K+ ions through both leak channels and voltage-gated potassium channels stores the resting potential.
Refractory period
When the resting membrane potential is restored, all voltage-gated ion channels close and reset. However, by the time all the voltage-gated potassium channels close, the membrane potential will have fallen below what it normally is at rest. This post action potential hyper polarization is called the refractory period. It is hard to trigger another action period when the membrane is this hyper polarized.
Voltage-gated calcium channels
When the action potential reaches the end of the axon (axon terminal), it triggers the opening voltage-gated calcium channels. Calcium is 1000x more concentrated outside the cell than in, so it rushes into the cell. The influx of calcium triggers the fusion of neurotransmitter-filled vesicles. Neurotransmitters are released into the synapse, where they activate receptors on a downstream cell.
Synaptic transmission
The primary means of communication between neurons. Transmission of chemical messages (neurotransmitters) from one neuron to another via synaptic connections. Released neurotransmitters activate proteins on downstream neurons, which can allow Na+ ions to enter those cells.
Why doesn’t the action potential travel backwards?
An action potential involves an influx of positive charge into the cell. The influx of positive ions pushes other positive ions away (down concentration gradient). Previously active voltage-gated Na+ channels are in refractory period (ball is clogging the pore) - influx of positive ions cannot reopen them.
The all-or-none law
An action potential can occur or not, but once triggered it propagates down the length of the axon without growing or diminishing in size. No such thing as a strong or weak action potential.
Rate law
The strength of the “message” is represented by the rate of firing (the number of action potentials per second, rather than the size or speed of the action potential).
Myelination
Propagating the action potential can be slow and axons can be long. Myelination makes this more efficient by wrapping an insulating layer of fat around segments of the axon.
Hydrated ions (K+ vs Na+)
When dissolved in water, ions get surrounded by water molecules - they come hydrated. K+ ions are equally happy when inside the pore of a potassium ion channel or when surrounded by water. Na+ ions are too small to comfortably fit (unhydrated) in the pore of a potassium ion channel, so they prefer to stay outside of those ion channels with their hydration shell intact.
Two types of cells in the central nervous system (CNS):
- Neurons: responsible for the electrical signals (action potentials) that communicate information about sensations and movements.
- Glial cells: serve a variety of support functions for neurons
4 types of glial cells
- Astrocytes
- Microglia
- Oligodendrocytes
- Ependymal cells
Astrocytes
Janitors of the cell, break down and clean up waste, provides scaffolding for other cellular functions.
Microglia
Provide immune support, regulate cell development and respond to injury.
Oligodendrocytes
Create myelin, wrap it around nearby axons, can provide sheath for 50 axons, Schwann cells = equivalent in peripheral nervous system.
Ependymal cells
Line the ventricles, circulate cerebrospinal fluid (CF)
Nodes of Ranvier
Each segment of myelin is separated by 1 micron of exposed axon. The exposed segments of myelinated axons are called the nodes of Ranvier. They are the only places where myelinated axons feel a charge difference between inside and out.
Synapse
A junction between the axon terminal (terminal button) of the sending neuron and the cell membrane of the receiving neuron. Communication across the synapse is mediated by the release of a signalling molecule from the axon terminal.
Synaptic vessicles
Contain molecules of neurotransmitter. They dock at presynaptic membrane and release neurotransmitter into the synaptic clef.